Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq67 123 1e-23 seq4222 122 5e-23 seq973 122 5e-23 seq222 122 5e-23 seq1664 120 2e-22 seq172 120 2e-22 seq111 120 2e-22 seq199 113 2e-20 seq1633 111 8e-20 seq654 111 8e-20 seq268 111 8e-20 seq100 107 1e-18 >seq67 Length=724624 Score = 123 bits (136), Expect = 1e-23 Identities = 79/87 (91%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 586322 TAAAAAAAAAAATTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 586381 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 586382 CGCTCTAACCAACTGAGCTAATGGGCC 586408 >seq4222 Length=9209 Score = 122 bits (134), Expect = 5e-23 Identities = 87/101 (86%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 |||| | || | || |||||| |||||||||||| |||||||||| ||||||||| Sbjct 5734 AAATGTTGATTAAAGAAAAAAAAGAATTGGCCCATGGGGGGATCGAACCCGCGACCTTCG 5675 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| |||||||||||||||||||| Sbjct 5674 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 5634 >seq973 Length=40355 Score = 122 bits (134), Expect = 5e-23 Identities = 83/93 (89%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 || ||| |||||| ||||||||||||| |||||||||| ||||||||||||||||| Sbjct 6821 AAATAAGAAAAAAA-AAATTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTA 6763 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 6762 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 6730 >seq222 Length=956958 Score = 122 bits (134), Expect = 5e-23 Identities = 80/89 (90%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| || |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 342370 TAAAAAAAAAAGTTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 342429 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||| |||||||||||||||||||||| Sbjct 342430 CGCTCTAACCAACTGAGCTAATGGGCCGT 342458 >seq1664 Length=64206 Score = 120 bits (132), Expect = 2e-22 Identities = 80/89 (90%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 ||||||| ||| |||||||||| |||||||||| |||||||||||||||||||||| Sbjct 51207 AAAAAATAAAAATTTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 51266 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| ||||||||||||||||||||| Sbjct 51267 ACGCTCTAACCAACTGAGCTAATGGGCCG 51295 >seq172 Length=559620 Score = 120 bits (132), Expect = 2e-22 Identities = 83/94 (88%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 |||||||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct 28929 TAATAAAAAA---AAATGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 28873 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533 ||||||||| ||||||||||||||||||||| || Sbjct 28872 CGACGCTCTAACCAACTGAGCTAATGGGCCGCCG 28839 >seq111 Length=263673 Score = 120 bits (132), Expect = 2e-22 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| || |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 83731 TAAAAAAAAAATTTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 83790 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||||| |||||||||||||||||||| || Sbjct 83791 CGCTCTAACCAACTGAGCTAATGGGCCTTC 83820 >seq199 Length=210833 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 115645 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 115704 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 115705 TGAGCTAATGGGCC 115718 >seq1633 Length=27543 Score = 111 bits (122), Expect = 8e-20 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 |||| |||||| | ||||||||| |||||||||| ||||||||||||||||||| Sbjct 2752 TTAAACAAAAATAA---TGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 2696 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||||||||| Sbjct 2695 ACGACGCTCTAACCAACTGAGCTAATGGGCC 2665 >seq654 Length=262203 Score = 111 bits (122), Expect = 8e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 11435 AGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||||| ||||||| | ||||||||| |||||||||| ||||||||||||||| Sbjct 45084 AGAATT--TAAAAAAAGA---TGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTAT 45138 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||||||||||||||||||| Sbjct 45139 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 45173 >seq268 Length=103496 Score = 111 bits (122), Expect = 8e-20 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| | ||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 73128 AAAAATAGTAGTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 73187 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 73188 CTCTAACCAACTGAGCTAATGGGCC 73212 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 61186 TGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 61245 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 61246 TGAGCTAATGGGCC 61259 >seq100 Length=716407 Score = 107 bits (118), Expect = 1e-18 Identities = 75/86 (87%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| || ||||| |||| |||||||||| |||||||||||||||||||||||| Sbjct 709434 AAAAAAAAAAGTTGGCTCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 709375 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||| ||| Sbjct 709374 GCTCTAACCAACTGAGCTAATGAGCC 709349 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261468646138852