Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq241 140 3e-28 seq569 131 2e-25 seq412 98.7 9e-16 >seq241 Length=949647 Score = 140 bits (154), Expect = 3e-28 Identities = 172/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||| || ||||||| ||| |||||||| | ||| ||||||||||| | || ||||| Sbjct 165824 CATTCCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATC 165765 Query 94837 GCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCT 94894 | | || || | ||| || | ||||||||| ||||||| || | ||| || ||| Sbjct 165764 GG--AAAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCT 165707 Query 94895 GGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG 94954 || || || || |||||||| | ||||| ||||| || | | |||||||| | Sbjct 165706 GGTGGGATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGC 165647 Query 94955 TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | |||||||||||| ||||| | |||||||| || |||||||| Sbjct 165646 TCGACCTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594 Score = 140 bits (154), Expect = 3e-28 Identities = 175/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || |||||||||||||| ||||||||| || | || ||||| ||||| | Sbjct 166289 AAAAATTTGCATTCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGAT 166230 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| | |||| || || | ||||| || |||||||||||| ||| Sbjct 166229 GTTGTAATCAGAAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTG 166170 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||||||||||| |||||||| || | ||||| || || || | | || || Sbjct 166169 TTGATCTGGAGGAATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATC 166110 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || | || || ||||||||||| | ||||| |||||||||||||| Sbjct 166109 AGATGGCTCAACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||| |||||||||| ||| |||||||| | ||||||||||||||| | || ||||| Sbjct 167192 CATTCCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATC 167133 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 | |||| ||| || || ||||| ||| | |||||||| | ||| |||||||| Sbjct 167132 AGAAAGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGG 167073 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 |||||| ||||| || || | ||||| || || || | | || |||| | || Sbjct 167072 AGGAATTCCTTCCTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTC 167013 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | || || ||||||||||| | |||||| ||||| |||||||| Sbjct 167012 AACTTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962 Score = 118 bits (130), Expect = 1e-21 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || |||| ||||| |||||| || || | || ||||| ||||| | Sbjct 166745 AAAAATTTGCATACCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGAT 166686 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||||||||| | ||| ||| || || ||||| ||| | |||||||| | ||| Sbjct 166685 GTTATAATCCGAAAGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTG 166626 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || ||||| || || |||||||| || | ||||| || || ||| | | ||| || Sbjct 166625 TTGGTCTGGTGGGATCCCTTCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATC 166566 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| || | ||||||||||| ||||| | || || ||||| || ||||| Sbjct 166565 AGAAGGTTCGACTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||| |||||||||| ||| ||||| || | ||| ||||||||||| | || ||||| Sbjct 166052 CATTCCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATC 165993 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 | ||| ||| |||| |||||||| ||||||| || | ||| |||||||| Sbjct 165992 AGAAAGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGG 165933 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 || || ||||| || || | ||| || || || || | | ||||| | | || Sbjct 165932 TGGGATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTC 165873 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | || || || |||||||| | |||||| || ||||||||||| Sbjct 165872 AACTTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822 Score = 109 bits (120), Expect = 5e-19 Identities = 168/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || |||||||||||||| ||| || || || | || ||||| || || | Sbjct 166517 AAAAATTTGCATTCCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGAT 166458 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| | |||| ||| || | ||||| || |||||||||||| ||| Sbjct 166457 GTTGTAATCAGAAAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTG 166398 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||||| || || ||||| || || | || || || || || | | ||||| Sbjct 166397 TTGATCTGGTGGGATTCCTTCCTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTC 166338 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | ||||| || | ||||||||||| ||||| | || || ||||| || ||||| Sbjct 166337 GGATGGTTCGACTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166278 Score = 107 bits (118), Expect = 2e-18 Identities = 175/249 (70%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 94763 TTTTTA--AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCT 94820 |||||| || ||| || ||| ||||| || | ||| || || || | || ||||| | Sbjct 167436 TTTTTACGAAGATTTGCATTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTT 167377 Query 94821 TTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGAT 94878 |||| | ||| ||||| | || || || ||| || || ||||| ||| | ||||| Sbjct 167376 TTTGGATGTTGTAATCAG--AAAGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGAT 167319 Query 94879 TAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCC 94938 || | ||| |||||||| || || ||||| ||||| | ||||| || || || | Sbjct 167318 CAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTCTC 167259 Query 94939 GACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 | || |||| | || || || | || || ||||||||||| | |||||| ||||| Sbjct 167258 AATGGTATCAGATGGCTCAACTTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAA 167199 Query 94999 GATCTGCAT 95007 ||||||||| Sbjct 167198 GATCTGCAT 167190 Score = 104 bits (114), Expect = 2e-17 Identities = 167/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||| |||||||||| ||| || || || | ||| ||||| ||||| | Sbjct 166973 AAAAATCTGCATTCCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGAT 166914 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || || | ||| ||| || || ||||| || |||||||||| | ||| Sbjct 166913 GTTGTAGTCAGAAAGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTG 166854 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||||||||||| |||||||| || | || || || || || | | || || Sbjct 166853 TTGATCTGGAGGAATTCCTTCTTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATC 166794 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || | ||||||||||| || || | || || ||||| || ||||| Sbjct 166793 AGAAGGTTCAACTTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734 Score = 104 bits (114), Expect = 2e-17 Identities = 174/249 (70%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 94763 TTTTTA--AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCT 94820 |||||| || ||| || ||| ||||| || | ||| || || || | || ||||| | Sbjct 167664 TTTTTACGAAGATTTGCATTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTT 167605 Query 94821 TTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGAT 94878 |||| | ||| ||||| | || || || ||| || | ||||| ||| | ||||| Sbjct 167604 TTTGAATGTTGTAATCAG--AAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGAT 167547 Query 94879 TAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCC 94938 ||| | ||| |||||||| || || ||||| ||||| | ||||| || || || | Sbjct 167546 TAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTC 167487 Query 94939 GACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 | || |||| | || || || | ||||||||||||||||| | ||||| || || Sbjct 167486 AATGGTATCAGAAGGTTCCACTTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAA 167427 Query 94999 GATCTGCAT 95007 ||| ||||| Sbjct 167426 GATTTGCAT 167418 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 || || |||| ||| ||||||||||| | || ||||| | | || || | ||| | Sbjct 167854 ACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATC--TGAAAGGGTACGTCCATCTT 167797 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| ||||| || | || || || | || |||||||| || || ||||| ||||| | Sbjct 167796 CCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCTT 167737 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||||| || || || | | ||| |||| | || || || | |||||||||| Sbjct 167736 GGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTTT 167677 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||| | ||||| || ||||| ||||| Sbjct 167676 TTCCAGTTAATGTTTTTACGAAGATTTGCAT 167646 >seq569 Length=200630 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||||||||| | || ||||||||||| | ||| || ||| | |||| | Sbjct 134607 CGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGTCCA 134548 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || ||||| ||||| || | |||||||| | ||| |||||||| || ||||| || ||| Sbjct 134547 TCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCCTCCTTG 134488 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||||||||||| ||| || || | | | || || || | |||||| Sbjct 134487 TCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGGGTGATG 134428 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || |||||||| || || ||||| Sbjct 134427 GTTTTACCGGTTAGGGTTTTCACGAAAATTTGCAT 134393 >seq412 Length=275653 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || | ||||| | || || ||||| || ||||| || || | |||||||| Sbjct 83015 CCACCACGCAATCTTAGGACTAAATGCAACGTTGATTCTTTCTGAATATTATAATCAGAA 82956 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| ||| || || |||||||| | || ||||| | || ||||| || || Sbjct 82955 AGAGTGCGCCCATCTTCGAGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGGG 82896 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || |||||||| | || || |||||||| ||| || || | | ||||| Sbjct 82895 ATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATTTTCGATGGTATCGGAAGGCTCGACC 82836 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || ||||| || ||||| | |||||| |||||||||||||| Sbjct 82835 TCAAGAGTTATGGTCTTGCCAGTTAAAGTTTTAACAAAGATCTGCAT 82789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448251543039720