Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1159 351 1e-91 >seq1159 Length=103958 Score = 351 bits (388), Expect = 1e-91 Identities = 572/818 (70%), Gaps = 10/818 (1%) Strand=Plus/Plus Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATA-G 21242 |||||| || || | ||| |||| || || ||||| || || || |||||| | Sbjct 49831 TTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATCAGATATAAG 49890 Query 21243 ATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATA 21302 |||| ||||||||||||||||| || || ||| ||| | |||||| ||||| | || Sbjct 49891 ATTC-ATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAGTTCAGTTA 49949 Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362 |||| | ||| || ||||| || || || || ||||||| | |||||||| ||||| | Sbjct 49950 ATAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCATCCCGATTA 50009 Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTA 21422 | | || |||||||| | || ||||| | ||| || || || || ||| | Sbjct 50010 AACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATCGCGAATAA 50069 Query 21423 TATTTATTATCCTAGATGTACT-AGGGGGATACAATAAT-TGTTTAAACATCAAACATGC 21480 || | |||| | | | | | || | ||||| | | |||||| ||||| || Sbjct 50070 TACTCGTTATAC--GTTCCTTTGACGGCTTTTGAATAAGATATGTAAACAATAAACAAGC 50127 Query 21481 AAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGG 21540 ||| || |||| ||||||||||| | ||||||||||||||||| ||||||||||| Sbjct 50128 AAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTTAAACCGGG 50187 Query 21541 CATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCC 21600 |||||| || | |||||| |||||||| || | ||||| ||| ||||||||||| || Sbjct 50188 CATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAGAAAATACC 50247 Query 21601 CTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTA-TCCAATATCC 21659 ||||||||| ||||| |||||||| ||||| || | || | | |||| | | | |||| Sbjct 50248 CTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTACTA-ATCC 50306 Query 21660 ATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAA 21719 | ||| ||||| | || || | ||||| |||| || || || || || || || | Sbjct 50307 AATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCGTTAAATA 50366 Query 21720 GATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAG 21779 | | ||||| | | ||| | || || |||||||||| Sbjct 50367 AAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTACATTTCAG 50426 Query 21780 AATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAA 21839 | || |||||||| || || || ||||| ||||||||||| | ||| || | |||| Sbjct 50427 AGTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTTACCTGAA 50486 Query 21840 CCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAA 21898 | || || ||||| |||| | | || ||||| ||||| ||||||||| || |||||| Sbjct 50487 CTTCTTGACTAAAA-CGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCAGCAAAA 50545 Query 21899 AATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTCCAATCTAAT 21958 || || || | || ||||||| ||||||||||| |||||| ||| ||||| Sbjct 50546 AAGGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTTGCCAATGATTG 50605 Query 21959 AAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 | |||||| || | ||||||||||||||| |||||||| Sbjct 50606 AGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAA 50643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531853746725480