Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq1159 351 1e-91
>seq1159
Length=103958
Score = 351 bits (388), Expect = 1e-91
Identities = 572/818 (70%), Gaps = 10/818 (1%)
Strand=Plus/Plus
Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATA-G 21242
|||||| || || | ||| |||| || || ||||| || || || |||||| |
Sbjct 49831 TTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATCAGATATAAG 49890
Query 21243 ATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATA 21302
|||| ||||||||||||||||| || || ||| ||| | |||||| ||||| | ||
Sbjct 49891 ATTC-ATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAGTTCAGTTA 49949
Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362
|||| | ||| || ||||| || || || || ||||||| | |||||||| ||||| |
Sbjct 49950 ATAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCATCCCGATTA 50009
Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTA 21422
| | || |||||||| | || ||||| | ||| || || || || ||| |
Sbjct 50010 AACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATCGCGAATAA 50069
Query 21423 TATTTATTATCCTAGATGTACT-AGGGGGATACAATAAT-TGTTTAAACATCAAACATGC 21480
|| | |||| | | | | | || | ||||| | | |||||| ||||| ||
Sbjct 50070 TACTCGTTATAC--GTTCCTTTGACGGCTTTTGAATAAGATATGTAAACAATAAACAAGC 50127
Query 21481 AAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGG 21540
||| || |||| ||||||||||| | ||||||||||||||||| |||||||||||
Sbjct 50128 AAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTTAAACCGGG 50187
Query 21541 CATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCC 21600
|||||| || | |||||| |||||||| || | ||||| ||| ||||||||||| ||
Sbjct 50188 CATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAGAAAATACC 50247
Query 21601 CTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTA-TCCAATATCC 21659
||||||||| ||||| |||||||| ||||| || | || | | |||| | | | ||||
Sbjct 50248 CTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTACTA-ATCC 50306
Query 21660 ATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAA 21719
| ||| ||||| | || || | ||||| |||| || || || || || || || |
Sbjct 50307 AATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCGTTAAATA 50366
Query 21720 GATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAG 21779
| | ||||| | | ||| | || || ||||||||||
Sbjct 50367 AAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTACATTTCAG 50426
Query 21780 AATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAA 21839
| || |||||||| || || || ||||| ||||||||||| | ||| || | ||||
Sbjct 50427 AGTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTTACCTGAA 50486
Query 21840 CCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAA 21898
| || || ||||| |||| | | || ||||| ||||| ||||||||| || ||||||
Sbjct 50487 CTTCTTGACTAAAA-CGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCAGCAAAA 50545
Query 21899 AATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTCCAATCTAAT 21958
|| || || | || ||||||| ||||||||||| |||||| ||| |||||
Sbjct 50546 AAGGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTTGCCAATGATTG 50605
Query 21959 AAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996
| |||||| || | ||||||||||||||| ||||||||
Sbjct 50606 AGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAA 50643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531853746725480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |