Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1284 607 1e-168
seq1159 333 3e-86
seq104 114 2e-20
>seq1284
Length=72753
Score = 607 bits (672), Expect = 1e-168
Identities = 1262/1869 (68%), Gaps = 39/1869 (2%)
Strand=Plus/Minus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
|||||||||||||| | |||||||||||| | || ||| |||||||| ||||| ||
Sbjct 54605 GTGAATTGAATGGGTTGAGCTGCGGGTTTCGTTCTTAAATAATACATTCCTGTTTTAAGT 54546
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114
|| | | ||| ||||||||||| || |||| ||| ||| |||| | ||||
Sbjct 54545 CCTTGTCGCCAGCCGTAAAAATGAATTGATGTTAAAACGGAGTAAGTCGGTTTGGCTACG 54486
Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174
| | ||| | |||||| |||||||||||||| || || | | || || ||||||
Sbjct 54485 TAAAGATTTAAAGATTGGCTTTGATCGATGAAAGCCCCTCGAGCCGCGGCTTGATTTATG 54426
Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234
|| || | || ||||||||||| |||||||||| | || | ||| || || |
Sbjct 54425 ATGCATTTATTTGAAATTTCCCAAACTGTTTTATAAATTTCTTTTAAATCGTCAGG--GA 54368
Query 62235 TTTG-----TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 62289
|||| | || ||||| || || | || ||| || || ||| || || |||||
Sbjct 54367 TTTGGGGGATGTTTTGAATTGAGCCGCGATTTGCAATTATTTGATTTTTCATTAAATCAT 54308
Query 62290 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 62349
||| | || ||||||||| |||| | | || ||||||| ||||| || || |
Sbjct 54307 CCCAAAGCCCCCTTTCGGTTAAATCTCTTAATAAGTGGTGATTAACAACTTGGAAATCCC 54248
Query 62350 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTC 62409
|||| | |||||| || || |||||||| || || ||||| | || || |||||||
Sbjct 54247 CAGAAAGTACTCTTCGCGTATAAATATTCGATGTGTAAGGTTCAAAAGATTCGTTATTTC 54188
Query 62410 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62469
| | ||||||||| ||||| || || ||||| || || | | |||| |||||| | |
Sbjct 54187 CTAGAATTTGAGCTGTTGAAGCTGTTGGCATTGGGGCTAAGAGTAAAGAATTTCTTATTC 54128
Query 62470 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 62529
||| | | | ||||| ||||||| || ||||| ||| | ||| || || |||
Sbjct 54127 CGTGTTTATTAATTTTTTCTTTTAATTCTTTCCAATCCCATAAATCAGATGGAGTAACAT 54068
Query 62530 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATG 62589
||| | || || ||||| | || ||| || || || ||
Sbjct 54067 TCCACATATCGTATTGCAAGATTCCTTTACTAACAGGGGAACCTTGGTAAGTTTCATAAA 54008
Query 62590 GTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGA 62649
|| || || || |||| ||||||||| || ||||| ||||||||||||| ||||| |
Sbjct 54007 CCCCGTCTTTTTCGGCTAATTCACAACTAGCTTCTAAGGCACCGTAATAAAGCGTTTCAA 53948
Query 62650 AGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAA 62709
|||| | | |||| | || ||||| |||||||||| || | | | |||||
Sbjct 53947 AGATTTGCACGTTTAATTTATGGGCTTCGGGGCTATCAAAGGGGAGTCTCATCAAAATAA 53888
Query 62710 ACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 62769
| || || ||||||||||||| |||||| || || || | ||| | ||||| || |||
Sbjct 53887 AAGCATCTGCTAATCCTTGAATACCAATTCCAATGGGGCGATGGCGTTTATTGGACGTTT 53828
Query 62770 CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA---TTTCTGACAA 62826
|||||||||| | || |||||||||| ||| |||| |||||| | | ||| | ||||
Sbjct 53827 CAGCTTCTGGGAGTGGGTAATAATTAACATCGATAACTTTATTTAAATTTTTTGTTACAA 53768
Query 62827 TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATC---TATTACAA 62880
| | |||| | || | ||| ||||||||| | || || | | || |
Sbjct 53767 CTTTTGTGACGA---TTTTTAATTTTTCAAAATCAAAACTTTTCCTGTCGGGTTTAACGA 53711
Query 62881 ACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 62940
|| ||| | |||| ||||| | ||||||||| || | |||| || | | ||||
Sbjct 53710 ACTGGTTAACCGCAATTGATGCTAAATTACAAACTGCGATTTCATCAGGAGATGTGTATT 53651
Query 62941 GTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCT 63000
|| || || ||||| | ||| |||| || || || ||||||| |||||| ||||| |
Sbjct 53650 CAATGATTTCGGTGCATAAATTGCTACTTTTTATTGTACCTAAATGTTGTTGGTTACTTT 53591
Query 63001 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 63060
| ||||| || || ||||| | || ||||||| ||||||||||| ||||| | |
Sbjct 53590 TGCGATTACAAGCGTCTTTATACAACATATATGGAGTTCCAGTTTCAATTTGAGACACAA 53531
Query 63061 TAATCGCTTTCCAGACGACTCGAGCCTTTATT------ATAGATTTGTATCTCCTTTCTC 63114
| || |||||||| | ||| || |||| | | |||| | ||||||
Sbjct 53530 TTATGGCTTTCCATAATTCTCTGGCGGGTATTTGGCGAACAAATTT---TTTCCTTT--- 53477
Query 63115 TTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGAC 63174
||||||| | || ||| |||| | || |||||| || || || ||||
Sbjct 53476 TTTCGTAATTTTCGTATAATTCCACGAATTTTTCCCCCCAACAATCAGATAAACCGGGAC 53417
Query 63175 ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGAT 63234
||| || |||||||| | ||||||| | || |||| || ||||||||||| | ||
Sbjct 53416 ATTGATGAGGACACATTAGCGACCACATTGAATCTTCCTCGACGCGTTTCATAAATAAAT 53357
Query 63235 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63294
|||||||||| | ||| ||||| |||||| | ||| ||| || || ||||| |
Sbjct 53356 CAGGAATCCATAAAGCATAAAATAAATCTCTCGCCCTAACTTCTTCAGCCCCAGTATTTT 53297
Query 63295 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63354
|||| | || | || | | || ||| | |||||||||||| || || || || |
Sbjct 53296 TTTTTAAATTTAAAAAATCAACAACATCCGCATGCCACGGTTCTAAATAAATTGCAAACG 53237
Query 63355 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 63414
||||||| | ||| || || || ||||| | |||| ||| || |||||| |||| | |
Sbjct 53236 CTCCAGGTCTTTTATTACCCCCTTGATCGACATATCGAGCTGTATTATTAAAAACCCGTA 53177
Query 63415 ACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTG-GCA 63473
||||||| | | ||||||||| |||||||| || || | ||| | | | | || ||
Sbjct 53176 ACATTGGTACTAAACCGTTTGAAATACCATTAGTTCCAGCAATA-ATCGTGCCTTGTGCT 53118
Query 63474 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 63533
||||||||| | | || ||||| || || |||| || || | || ||| ||
Sbjct 53117 CGAATATTATGGACGTTAACTCCAATTCCTCCCGCACTTTTTGATATAATAGCACATTGT 53058
Query 63534 TTTA-ACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63592
| || | | | | || || | || ||| || ||| | | || |||||
Sbjct 53057 GAGATACAT-TTAAAAATGCCTTGGATTGAATCCTCCGGCATCATTACTAAGAAACATGA 52999
Query 63593 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 63652
|||||||| | ||| || | || |||||| || ||| ||||| ||||| |
Sbjct 52998 CGACATTTGTGGGCGAGGTGTCGCTGCGGCAAATAAAGTCGGACTCGCGTGAGTAAAATA 52939
Query 63653 TTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATT 63710
|| ||||| | ||| |||||| || ||||||||||| || || || || | |||||
Sbjct 52938 CTTCTCAGACATGTA-ATTGTAAGTTTCAATAGCTGATTCAATGTCTTCACCG-TGAATC 52881
Query 63711 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 63770
|| || || || ||||||||||| || || || | |||| | || || ||| |||||
Sbjct 52880 CCAACGGCCACGCGCATTAACATATGTTGGGGACGTTCAGCAATTTTTCCGTTGATTTTT 52821
Query 63771 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCG 63830
| | || || ||| | ||||||||||||||||| || ||||| || || || |||
Sbjct 52820 AGGAGATATGAACGTTCGAGTGTTTTAAAACCAAAATAATTATATGAGAAATCACGATCG 52761
Query 63831 TAAATAATA 63839
||||| |||
Sbjct 52760 TAAATGATA 52752
>seq1159
Length=103958
Score = 333 bits (368), Expect = 3e-86
Identities = 628/916 (69%), Gaps = 12/916 (1%)
Strand=Plus/Plus
Query 32987 TATCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAAT 33046
|||| ||||||| ||| || ||||||||| || || || ||| || || ||||
Sbjct 49809 TATCATCTTGAGC---AACACCAGCTTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAAT 49865
Query 33047 TAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAA 33106
|||| || || |||||| | ||| |||||||| ||||| || ||| || |
Sbjct 49866 TAGTACGCCCATCATCAGATATAAGATTCATAAAATCAAATGGATTAGTTGAATTGTATA 49925
Query 33107 tttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCA 33166
||||| | | || | ||||| | || | ||| || || || || || || ||
Sbjct 49926 ATTTTTCACAACCAAGTTCAGTTAATAAACGATCGGCAACAAACTCAATGTACTGCGACA 49985
Query 33167 TCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTT 33226
| | | |||||||| || || | |||| |||||||| |||| | |||||| ||||
Sbjct 49986 TTAAATTGCAATTCATCCCGATTAAACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTT 50045
Query 33227 CAATGGATACCGCATCTGTTATAATAGATC--TAACGGTTTCTTCACTCGGTGGATGCAA 33284
|||| |||||||| |||||| || || ||| ||| ||| || ||
Sbjct 50046 CAATTTCAACCGCATCGCGAATAATAC-TCGTTATACGTTCCTTTGA-CGGCTTTTG-AA 50102
Query 33285 TAA-ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTA 33343
||| || | |||||| ||||| || || ||| | || | ||| || || | |||||
Sbjct 50103 TAAGATATGTAAACAATAAACAAGCAAATTCGTAATGTAAACCTTCATCGCGCGAAATTA 50162
Query 33344 GTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAG 33403
||| || |||||||| | |||||||||| || |||||||| | |||||| || | |
Sbjct 50163 ATTCATTAGAAAACGTTAAACCGGGCATTAAACCCCGCTTTTTCAACCAAAAAATAGCTG 50222
Query 33404 CGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCAT 33463
| || ||| |||||||| || || || || || ||||| |||| | | || |||
Sbjct 50223 CAAAACTTCCCGAAAAGAAAATACCCTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAA 50282
Query 33464 AACCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAG 33520
|| ||| | | | ||||| ||| ||||||||| || |||||||| |||||||
Sbjct 50283 AAGTCGCGTTTTTACTACTAATCCAATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAG 50342
Query 33521 GCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTAT 33580
| | |||||| ||||| ||||| | | | | ||||| || ||| || |||||| |
Sbjct 50343 GAAGCGTTTCGATGGCGTTAAATAAAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTT 50402
Query 33581 CGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGA 33640
| || || | || |||||||| || ||||| |||||||| || || ||||| ||||| |
Sbjct 50403 CAATTAACATGCTGTACATTTCAGAGTGAATATTTTCAATAGCAATTTGAAAACCGTAAA 50462
Query 33641 AACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCA 33700
|||| | || || || | ||| |||||| || ||| ||||| | |||||||| || |
Sbjct 50463 AACAACGTGCTTCCGTTACCTGAACTTCTTGACTAAAACGTTCAACTAAATTTTCGTTTA 50522
Query 33701 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTG 33760
| ||||| ||| || |||||||| || || ||||| ||||||| |||||
Sbjct 50523 CAATTCCATCAGAAGCAGCAAAAAAGGCTAAAACATGGGAGATAAAATGACGTTCGTTAT 50582
Query 33761 GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAA 33820
|||| | | | ||||| ||||| |||||| || | |||||||||||| |||||||
Sbjct 50583 CGGTTAATGTTTGCCAATGATTGAGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAA 50642
Query 33821 ATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAA 33880
|||| || || |||| ||| || | ||| || ||| ||| | || || |||| |
Sbjct 50643 ATGAAGCTTCCGCCTGTTTGTATTTCGCCCAAATATCAGGATACTCAATGGGAAAAACGA 50702
Query 33881 CAAATCTATTTGGATT 33896
| || | |||||||
Sbjct 50703 CGAAACGTCTTGGATT 50718
>seq104
Length=333490
Score = 114 bits (126), Expect = 2e-20
Identities = 280/405 (69%), Gaps = 31/405 (8%)
Strand=Plus/Plus
Query 157218 TATGGTAAAGGAGCAAAGGGTGGTATCATGGCAGTCTTTCTAATGGGTTGTTACGA-CGA 157276
||||||| || ||| ||||| || ||| | | |||||||||||||||||||| | |
Sbjct 112952 TATGGTACTGGTAAAAAAGGTGGAATGATGTCGATTTTTCTAATGGGTTGTTACGATCCA 113011
Query 157277 TGAATCCGGTAAATGGAAG-ACGGTTACCAAGTGTTCA----GGACACGATGATAATACG 157331
|||| | || | || ||||||||| ||||| |||||||||||||| ||
Sbjct 113012 --AATCGTGATTATTTTTGTACTGTTACCAAG-GTTCATACAGGACACGATGATAAAACA 113068
Query 157332 TTA--AGGGTTTTGCAAGACCAATTAACGATG-GTTAAAATTAACAAG-GATCCCaaaaa 157387
||| | || || ||| | || | |||| | ||||| ||| | ||| ||| ||
Sbjct 113069 TTAGAACGGCTT--CAAAATGAACT--CGATATGATAAAAATAAGTGGAGATATCAATAA 113124
Query 157388 aaTTCCAGAGTGGTTG-GTAGTTAATAAAATCTAT-ATTCCCGATTTTGTAGTAGAGGAT 157445
||| || | ||||| || || | ||| | || || |||||||| |||| | | ||
Sbjct 113125 AATACCTAAATGGTTACGTTGT--ACGAAAACAATGATCCCCGATTTAGTAGCAAAAGAC 113182
Query 157446 CCGAAA---CAATCTCAGATATGGGAAATTTCAGGAGCAGAGTTTACATCTTCC--AAGT 157500
|| ||| ||| || | ||||||||| | || || || || || || | ||||
Sbjct 113183 CCCAAAAACCAACCTG---TTTGGGAAATTACGGGCGCGGAATTCAC-TCAACACGAAGT 113238
Query 157501 CCCATACCGCAAATGGAATATCCATTAGATTTCCTAGATTTACTAGGATTAGAGAAGATA 157560
| | |||||||||||||| || ||| | || || || |||| | |||| ||||||| |
Sbjct 113239 TC-ACACCGCAAATGGAATTTCAATTCGTTTCCCAAGGGTTACAAAGATTCGAGAAGAAA 113297
Query 157561 AAACGTGGAAAGAATCTACTCATCTAAACGATTTAGTAAACTTGA 157605
| || |||||||| | ||| || |||| || |||| ||| ||||
Sbjct 113298 AGACTTGGAAAGAGGCAACTAATTTAAATGAATTAGAAAAATTGA 113342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622892092533320
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