Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1284 181 3e-40 seq1159 167 6e-36 >seq1284 Length=72753 Score = 181 bits (200), Expect = 3e-40 Identities = 1102/1745 (63%), Gaps = 30/1745 (2%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| || | |||| |||||| || || |||||||||||||| || || |||| || Sbjct 52825 ATCAACGGAAAAATTGCTGAACGTCCCCAACATATGTTAATGCGCGTGGCCGTTGGGATT 52884 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTATT 363548 || | || |||| | || |||||||| || || || | || | ||||| Sbjct 52885 CACGGTGAAGACATTGAATCAGCTATTGAAACTTACAA--TTACATGTCTGAGAAGTATT 52942 Query 363549 C-ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607 || ||||| | || || | | || | || | | ||||| ||||| || | Sbjct 52943 TTACTCACGCGAGTCCGACTTTATTTGCCGCAGCGACACCTCGCCCACAAATGTCGTCAT 53002 Query 363608 GCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACT-TAAGAA 363665 | |||||| ||| ||| ||| ||||| ||| | || || ||| | | | | || Sbjct 53003 G-TTTCTTAGTAATGATGCCGGAGGATTCAATCCAAGGCATTTTTAAATGTATCTCACAA 53061 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTG 363724 | ||||| |||| || || | ||| || |||||||| || | || |||| ||| |||| | Sbjct 53062 T-GTGCTATTATATCAAAAAGTGCGGGAGGAATTGGAGTTAACG-TCCATAATATTCGAG 53119 Query 363725 CACA--GAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGC 363781 |||| | || ||| || || || | || || || || || | || || ||| Sbjct 53120 CACAAGGCACGATTA--TTGCTGGAACTAATGGTATT-TCAAACGGTTTAGTACCAATGT 53176 Query 363782 TTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGG 363839 | || || ||| | ||||| || | || ||||| || || || | |||| | || Sbjct 53177 TACGGGTTTTTAATAATACAGCTCGATATGTCGATCAAGGGGGTAATAAAAGACCT--GG 53234 Query 363840 GGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCG 363899 |||||||| || ||| | || || ||||| ||| || |||| ||| | | | Sbjct 53235 AGCGTTTGCAATTTATTTAGAACCGTGGCATGCGGATGTTGTTGATTTTTTAAATTTAAA 53294 Query 363900 GAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTC 363959 ||||| || || || ||| | | || | ||| | || ||||| | ||| || | Sbjct 53295 AAAAAATACTGGGGCTGAAGAAGTTAGGGCGAGAGATTTATTTTATGCTTTATGGATTCC 53354 Query 363960 TGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGA 364019 ||| |||||||| ||||| |||| || | | ||||| || | || || || | Sbjct 53355 TGATTTATTTATGAAACGCGTCGAGGAAGATTCAATGTGGTCGCTAATGTGTCCTCATCA 53414 Query 364020 ATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079 |||||| ||| | || ||| ||||| || | | || | |||||||||| || || Sbjct 53415 ATGTCCCGGTTTATCTGATTGTTGGGGGGAAAAATTCGTGGAATTATACGAAAATTACGA 53474 Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATT-CCCGCACAGA-AGCTATGGTTTGCCATCATG 364137 | ||| ||| | || | ||| | ||||| |||| | ||||| ||||| || Sbjct 53475 AAAA-AGGAAAAAATTTGTTCGCCAAATACCCGC-CAGAGAATTATGGAAAGCCATAATT 53532 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 | || || ||||| || ||||| || ||||||||||| ||||| | || || ||||| Sbjct 53533 GTGTCTCAAATTGAAACTGGAACTCCATATATGTTGTATAAAGACGCTTGTAATCGCAAA 53592 Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAA 364257 ||||| || || | |||||||| | ||||| |||| ||||| || |||||| Sbjct 53593 AGTAACCAACAACATTTAGGTACAATAAAAAGTAGCAATTTATGCACCGAAATCATTGAA 53652 Query 364258 TACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317 ||||| |||| || || | || || ||||| | || || || ||| || ||| Sbjct 53653 TACACATCTCCTGATGAAATCGCAGTTTGTAATTTAGCATCAATTGCGGTTAACCAGTTC 53712 Query 364318 GTAAAA---GATGG---TACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCT 364371 || ||| || | | |||||| | | | | ||| || | || Sbjct 53713 GTTAAACCCGACAGGAAAAGTTTTGATTTTGAAAAATTAAAAATCGTCACAAAAGTTGTA 53772 Query 364372 ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGT 364431 || ||| | | || |||||||| |||||||| ||| | || ||||| || Sbjct 53773 ACAAAAAATTTAAATAAAGTTATCGATGTTAATTATTACCCACTCCCAGAAGCTGAAACG 53832 Query 364432 TCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATG 364491 || |||| || |||||||| ||||| ||||| | || || | || || | |||||| Sbjct 53833 TCCAATAAACGCCATCGCCCCATTGGAATTGGTATTCAAGGATTAGCAGATGCTTTTATT 53892 Query 364492 ATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551 || | | | | |||||| || || || | | |||| | | ||||||||| Sbjct 53893 TTGATGAGACTCCCCTTTGATAGCCCCGAAGCCCATAAATTAAACGTGCAAATCTTTGAA 53952 Query 364552 ACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTAC 364611 || | |||| | || | ||| ||||| || || ||| | || || Sbjct 53953 ACGCTTTATTACGGTGCCTTAGAAGCTAGTTGTGAATTAGCCGAAAAAGACGGGGTTTAT 54012 Query 364612 TCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTC 364671 ||||| | || |||||| || | |||| || || | ||| | |||||||| Sbjct 54013 GAAACTTACCAAGGTTCCCCTGTTAGTAAAGGAATCTTGCAATACGATATGTGGAATGTT 54072 Query 364672 ACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACT 364731 || ||||||| |||| | ||| | || || |||| || || || | Sbjct 54073 ACTCCATCTGATTTATGGGATTGGAAAGAATTAAAAGAAAAAATTAATAAACACGGAATA 54132 Query 364732 CGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAAC 364791 | || || | | ||| || ||||| || ||||| || || || || || ||||| Sbjct 54133 AGAAATTCTTTACTCTTAGCCCCAATGCCAACAGCTTCAACAGCTCAAATTCTAGGAAAT 54192 Query 364792 AACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAA 364851 ||||| | || ||||| | ||| ||| ||||| | || | || ||||| || || Sbjct 54193 AACGAATCTTTTGAACCTTACACATCGAATATTTATACGCGAAGAGTACTTTCTGGGGAT 54252 Query 364852 TTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGAC 364911 || | || |||||| | || || | | ||| | |||| | ||||| |||| ||| Sbjct 54253 TTCCAAGTTGTTAATCACCACTTATTAAGAGATTTAACCGAAAGGGGGCTTTGGGATGAT 54312 Query 364912 AGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCA 364971 ||||| || | || || || | || || | || ||||| || | | || Sbjct 54313 TTAATGAAAAATCAAATAATTGCAAATCGCGGCTCAATTCAAAACATCCCCCAAATCCCT 54372 Query 364972 GAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGAT 365031 || ||| | || ||||| ||||| || ||||||||||| | | |||| || Sbjct 54373 GACGATTTAAAAGAAATTTATAAAACAGTTTGGGAAATTTCAAATAAATGCATCATAAAT 54432 Query 365032 ATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACT 365091 || || | ||| || ||||| ||| ||| ||||| || || || | | | | | Sbjct 54433 CAAGCCGCGGCTCGAGGGGCTTTCATCGATCAAAGCCAATCTTTAAATCTTTACGTAGCC 54492 Query 365092 CAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAG 365151 | || || | | || | ||||| || ||||| ||||| ||| | || ||||| Sbjct 54493 AAACCGACTTACTCCGTTTTAACATCAATTCATTTTTACGGCTGGCGACAAGGACTTAAA 54552 Query 365152 ACAGG 365156 ||||| Sbjct 54553 ACAGG 54557 >seq1159 Length=103958 Score = 167 bits (184), Expect = 6e-36 Identities = 357/526 (68%), Gaps = 22/526 (4%) Strand=Plus/Minus Query 22433 TTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAA--CGTT-CATTCGCGG 22489 |||| || || || |||||||| | || ||||| | | | || || | || | || Sbjct 50336 TTAAAAAGAAAGCTGATTGGGCTTTAAATTGGATTAGTAGTAAAAACGCGACTTTTGGGG 50277 Query 22490 AACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAA 22549 ||||| | |||| ||||| | ||||| || ||||||||||| ||| ||| || | Sbjct 50276 AACGTTTAGTTGCTTTTGCGGCCGTTGAGGGTATTTTCTTTTCGGGAAGTTTTGCAGCTA 50217 Query 22550 TCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTA 22609 | |||||| | ||||| || | | ||||| ||| |||||||||| ||||| |||||| Sbjct 50216 TTTTTTGGTTGAAAAAGCGGGGTTTAATGCCCGGTTTAACGTTTTCTAATGAATTAATTT 50157 Query 22610 GCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATC--AT 22667 || ||||| ||| | ||| ||| ||||| || | ||| | |||||| || Sbjct 50156 CGCGCGATGAAGGTTTACATTACGAATTTGCTTG-----TTTATTGTTTACATATCTTAT 50102 Query 22668 TCATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACG 22727 ||| || | || | ||| | || ||||||| |||| |||||| |||||| Sbjct 50101 TCAAAAGCCGTCAAAGGAACGTATAACGAGTATTATTCGCGATGCGGTTGAAATTGAACA 50042 Query 22728 TCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATG-- 22785 |||| | || || | || || ||| | || || || ||| | | | |||| Sbjct 50041 GGAATTTTTAACTGATGCTCTTCCGGTTAGTTTAATCGGGATGAATTGCAATTTAATGTC 49982 Query 22786 --AGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGC 22843 ||||| ||| | |||||||| |||||| |||||| | ||| |||| || ||| Sbjct 49981 GCAGTAC----ATTGAGTTTGTTGCCGATCGTTTATTAACTGAACTTGGTTGTGAAAA-- 49928 Query 22844 ATTATA-ACGTC-GTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGAC 22901 |||||| | || |||||||||||| | ||| | ||||| || ||| || || Sbjct 49927 ATTATACAATTCAACTAATCCATTTGATTTTATGAATCTTATATCTGATGATGGGCGTAC 49868 Query 22902 CAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTT 22947 |||||||| || |||| ||||| || ||||||||||| |||||| Sbjct 49867 TAATTTCTTTGAGAAAAAGGTTGGGGAGTACCAAAAAGCTGGTGTT 49822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303235419634214