Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1284 181 3e-40
seq1159 167 6e-36
>seq1284
Length=72753
Score = 181 bits (200), Expect = 3e-40
Identities = 1102/1745 (63%), Gaps = 30/1745 (2%)
Strand=Plus/Plus
Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489
||||| || | |||| |||||| || || |||||||||||||| || || |||| ||
Sbjct 52825 ATCAACGGAAAAATTGCTGAACGTCCCCAACATATGTTAATGCGCGTGGCCGTTGGGATT 52884
Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTATT 363548
|| | || |||| | || |||||||| || || || | || | |||||
Sbjct 52885 CACGGTGAAGACATTGAATCAGCTATTGAAACTTACAA--TTACATGTCTGAGAAGTATT 52942
Query 363549 C-ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607
|| ||||| | || || | | || | || | | ||||| ||||| || |
Sbjct 52943 TTACTCACGCGAGTCCGACTTTATTTGCCGCAGCGACACCTCGCCCACAAATGTCGTCAT 53002
Query 363608 GCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACT-TAAGAA 363665
| |||||| ||| ||| ||| ||||| ||| | || || ||| | | | | ||
Sbjct 53003 G-TTTCTTAGTAATGATGCCGGAGGATTCAATCCAAGGCATTTTTAAATGTATCTCACAA 53061
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTG 363724
| ||||| |||| || || | ||| || |||||||| || | || |||| ||| |||| |
Sbjct 53062 T-GTGCTATTATATCAAAAAGTGCGGGAGGAATTGGAGTTAACG-TCCATAATATTCGAG 53119
Query 363725 CACA--GAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGC 363781
|||| | || ||| || || || | || || || || || | || || |||
Sbjct 53120 CACAAGGCACGATTA--TTGCTGGAACTAATGGTATT-TCAAACGGTTTAGTACCAATGT 53176
Query 363782 TTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGG 363839
| || || ||| | ||||| || | || ||||| || || || | |||| | ||
Sbjct 53177 TACGGGTTTTTAATAATACAGCTCGATATGTCGATCAAGGGGGTAATAAAAGACCT--GG 53234
Query 363840 GGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCG 363899
|||||||| || ||| | || || ||||| ||| || |||| ||| | | |
Sbjct 53235 AGCGTTTGCAATTTATTTAGAACCGTGGCATGCGGATGTTGTTGATTTTTTAAATTTAAA 53294
Query 363900 GAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTC 363959
||||| || || || ||| | | || | ||| | || ||||| | ||| || |
Sbjct 53295 AAAAAATACTGGGGCTGAAGAAGTTAGGGCGAGAGATTTATTTTATGCTTTATGGATTCC 53354
Query 363960 TGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGA 364019
||| |||||||| ||||| |||| || | | ||||| || | || || || |
Sbjct 53355 TGATTTATTTATGAAACGCGTCGAGGAAGATTCAATGTGGTCGCTAATGTGTCCTCATCA 53414
Query 364020 ATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079
|||||| ||| | || ||| ||||| || | | || | |||||||||| || ||
Sbjct 53415 ATGTCCCGGTTTATCTGATTGTTGGGGGGAAAAATTCGTGGAATTATACGAAAATTACGA 53474
Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATT-CCCGCACAGA-AGCTATGGTTTGCCATCATG 364137
| ||| ||| | || | ||| | ||||| |||| | ||||| ||||| ||
Sbjct 53475 AAAA-AGGAAAAAATTTGTTCGCCAAATACCCGC-CAGAGAATTATGGAAAGCCATAATT 53532
Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197
| || || ||||| || ||||| || ||||||||||| ||||| | || || |||||
Sbjct 53533 GTGTCTCAAATTGAAACTGGAACTCCATATATGTTGTATAAAGACGCTTGTAATCGCAAA 53592
Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAA 364257
||||| || || | |||||||| | ||||| |||| ||||| || ||||||
Sbjct 53593 AGTAACCAACAACATTTAGGTACAATAAAAAGTAGCAATTTATGCACCGAAATCATTGAA 53652
Query 364258 TACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317
||||| |||| || || | || || ||||| | || || || ||| || |||
Sbjct 53653 TACACATCTCCTGATGAAATCGCAGTTTGTAATTTAGCATCAATTGCGGTTAACCAGTTC 53712
Query 364318 GTAAAA---GATGG---TACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCT 364371
|| ||| || | | |||||| | | | | ||| || | ||
Sbjct 53713 GTTAAACCCGACAGGAAAAGTTTTGATTTTGAAAAATTAAAAATCGTCACAAAAGTTGTA 53772
Query 364372 ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGT 364431
|| ||| | | || |||||||| |||||||| ||| | || ||||| ||
Sbjct 53773 ACAAAAAATTTAAATAAAGTTATCGATGTTAATTATTACCCACTCCCAGAAGCTGAAACG 53832
Query 364432 TCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATG 364491
|| |||| || |||||||| ||||| ||||| | || || | || || | ||||||
Sbjct 53833 TCCAATAAACGCCATCGCCCCATTGGAATTGGTATTCAAGGATTAGCAGATGCTTTTATT 53892
Query 364492 ATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551
|| | | | | |||||| || || || | | |||| | | |||||||||
Sbjct 53893 TTGATGAGACTCCCCTTTGATAGCCCCGAAGCCCATAAATTAAACGTGCAAATCTTTGAA 53952
Query 364552 ACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTAC 364611
|| | |||| | || | ||| ||||| || || ||| | || ||
Sbjct 53953 ACGCTTTATTACGGTGCCTTAGAAGCTAGTTGTGAATTAGCCGAAAAAGACGGGGTTTAT 54012
Query 364612 TCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTC 364671
||||| | || |||||| || | |||| || || | ||| | ||||||||
Sbjct 54013 GAAACTTACCAAGGTTCCCCTGTTAGTAAAGGAATCTTGCAATACGATATGTGGAATGTT 54072
Query 364672 ACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACT 364731
|| ||||||| |||| | ||| | || || |||| || || || |
Sbjct 54073 ACTCCATCTGATTTATGGGATTGGAAAGAATTAAAAGAAAAAATTAATAAACACGGAATA 54132
Query 364732 CGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAAC 364791
| || || | | ||| || ||||| || ||||| || || || || || |||||
Sbjct 54133 AGAAATTCTTTACTCTTAGCCCCAATGCCAACAGCTTCAACAGCTCAAATTCTAGGAAAT 54192
Query 364792 AACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAA 364851
||||| | || ||||| | ||| ||| ||||| | || | || ||||| || ||
Sbjct 54193 AACGAATCTTTTGAACCTTACACATCGAATATTTATACGCGAAGAGTACTTTCTGGGGAT 54252
Query 364852 TTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGAC 364911
|| | || |||||| | || || | | ||| | |||| | ||||| |||| |||
Sbjct 54253 TTCCAAGTTGTTAATCACCACTTATTAAGAGATTTAACCGAAAGGGGGCTTTGGGATGAT 54312
Query 364912 AGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCA 364971
||||| || | || || || | || || | || ||||| || | | ||
Sbjct 54313 TTAATGAAAAATCAAATAATTGCAAATCGCGGCTCAATTCAAAACATCCCCCAAATCCCT 54372
Query 364972 GAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGAT 365031
|| ||| | || ||||| ||||| || ||||||||||| | | |||| ||
Sbjct 54373 GACGATTTAAAAGAAATTTATAAAACAGTTTGGGAAATTTCAAATAAATGCATCATAAAT 54432
Query 365032 ATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACT 365091
|| || | ||| || ||||| ||| ||| ||||| || || || | | | | |
Sbjct 54433 CAAGCCGCGGCTCGAGGGGCTTTCATCGATCAAAGCCAATCTTTAAATCTTTACGTAGCC 54492
Query 365092 CAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAG 365151
| || || | | || | ||||| || ||||| ||||| ||| | || |||||
Sbjct 54493 AAACCGACTTACTCCGTTTTAACATCAATTCATTTTTACGGCTGGCGACAAGGACTTAAA 54552
Query 365152 ACAGG 365156
|||||
Sbjct 54553 ACAGG 54557
>seq1159
Length=103958
Score = 167 bits (184), Expect = 6e-36
Identities = 357/526 (68%), Gaps = 22/526 (4%)
Strand=Plus/Minus
Query 22433 TTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAA--CGTT-CATTCGCGG 22489
|||| || || || |||||||| | || ||||| | | | || || | || | ||
Sbjct 50336 TTAAAAAGAAAGCTGATTGGGCTTTAAATTGGATTAGTAGTAAAAACGCGACTTTTGGGG 50277
Query 22490 AACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAA 22549
||||| | |||| ||||| | ||||| || ||||||||||| ||| ||| || |
Sbjct 50276 AACGTTTAGTTGCTTTTGCGGCCGTTGAGGGTATTTTCTTTTCGGGAAGTTTTGCAGCTA 50217
Query 22550 TCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTA 22609
| |||||| | ||||| || | | ||||| ||| |||||||||| ||||| ||||||
Sbjct 50216 TTTTTTGGTTGAAAAAGCGGGGTTTAATGCCCGGTTTAACGTTTTCTAATGAATTAATTT 50157
Query 22610 GCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATC--AT 22667
|| ||||| ||| | ||| ||| ||||| || | ||| | |||||| ||
Sbjct 50156 CGCGCGATGAAGGTTTACATTACGAATTTGCTTG-----TTTATTGTTTACATATCTTAT 50102
Query 22668 TCATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACG 22727
||| || | || | ||| | || ||||||| |||| |||||| ||||||
Sbjct 50101 TCAAAAGCCGTCAAAGGAACGTATAACGAGTATTATTCGCGATGCGGTTGAAATTGAACA 50042
Query 22728 TCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATG-- 22785
|||| | || || | || || ||| | || || || ||| | | | ||||
Sbjct 50041 GGAATTTTTAACTGATGCTCTTCCGGTTAGTTTAATCGGGATGAATTGCAATTTAATGTC 49982
Query 22786 --AGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGC 22843
||||| ||| | |||||||| |||||| |||||| | ||| |||| || |||
Sbjct 49981 GCAGTAC----ATTGAGTTTGTTGCCGATCGTTTATTAACTGAACTTGGTTGTGAAAA-- 49928
Query 22844 ATTATA-ACGTC-GTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGAC 22901
|||||| | || |||||||||||| | ||| | ||||| || ||| || ||
Sbjct 49927 ATTATACAATTCAACTAATCCATTTGATTTTATGAATCTTATATCTGATGATGGGCGTAC 49868
Query 22902 CAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTT 22947
|||||||| || |||| ||||| || ||||||||||| ||||||
Sbjct 49867 TAATTTCTTTGAGAAAAAGGTTGGGGAGTACCAAAAAGCTGGTGTT 49822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303235419634214
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |