Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1284 603 1e-167 seq1159 351 1e-91 seq104 93.3 5e-14 >seq1284 Length=72753 Score = 603 bits (668), Expect = 1e-167 Identities = 1263/1872 (67%), Gaps = 45/1872 (2%) Strand=Plus/Minus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 |||||||||||||| | |||||||||||| | || ||| |||||||| ||||| || Sbjct 54605 GTGAATTGAATGGGTTGAGCTGCGGGTTTCGTTCTTAAATAATACATTCCTGTTTTAAGT 54546 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || | | ||| ||||||||||| || |||| ||| ||| |||| | |||| Sbjct 54545 CCTTGTCGCCAGCCGTAAAAATGAATTGATGTTAAAACGGAGTAAGTCGGTTTGGCTACG 54486 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 | | ||| | |||||| |||||||||||||| || || | | || || ||||| Sbjct 54485 TAAAGATTTAAAGATTGGCTTTGATCGATGAAAGCCCCTCGAGCCGCGGCTTGATTTATG 54426 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 || || | || ||||||||||| |||||||||| | || | ||| || || | Sbjct 54425 ATGCATTTATTTGAAATTTCCCAAACTGTTTTATAAATTTCTTTTAAATCGTCAGGGA-- 54368 Query 62090 TTTG-----TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 62144 |||| | || ||||| || || | || ||| || || ||| || || ||||| Sbjct 54367 TTTGGGGGATGTTTTGAATTGAGCCGCGATTTGCAATTATTTGATTTTTCATTAAATCAT 54308 Query 62145 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 62204 ||| | || ||||||||| |||| | | || ||||||| ||||| || || | Sbjct 54307 CCCAAAGCCCCCTTTCGGTTAAATCTCTTAATAAGTGGTGATTAACAACTTGGAAATCCC 54248 Query 62205 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 62264 |||| | |||||| || || |||||||| || || ||||| | ||| || ||||||| Sbjct 54247 CAGAAAGTACTCTTCGCGTATAAATATTCGATGTGTAAGGTTCAAAAGATTCGTTATTTC 54188 Query 62265 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62324 | | ||||||||| ||||| || || ||||| || || | | |||| |||||| | | Sbjct 54187 CTAGAATTTGAGCTGTTGAAGCTGTTGGCATTGGGGCTAAGAGTAAAGAATTTCTTATTC 54128 Query 62325 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 62384 ||| | | | ||||| ||||||| || ||||| ||| | ||| || || ||| Sbjct 54127 CGTGTTTATTAATTTTTTCTTTTAATTCTTTCCAATCCCATAAATCAGATGGAGTAACAT 54068 Query 62385 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATG 62444 ||| | || || ||||| | || ||| || || || || Sbjct 54067 TCCACATATCGTATTGCAAGATTCCTTTACTAACAGGGGAACCTTGGTAAGTTTCATAAA 54008 Query 62445 GTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGA 62504 || || || || |||| ||||||||| || ||||| ||||||||||||| ||||| | Sbjct 54007 CCCCGTCTTTTTCGGCTAATTCACAACTAGCTTCTAAGGCACCGTAATAAAGCGTTTCAA 53948 Query 62505 AGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAA 62564 |||| | | |||| | || ||||| |||||||||| || | | | ||||| Sbjct 53947 AGATTTGCACGTTTAATTTATGGGCTTCGGGGCTATCAAAGGGGAGTCTCATCAAAATAA 53888 Query 62565 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 62624 | || |||||||||||||||| |||||| || || || | ||| | ||||| || ||| Sbjct 53887 AAGCATCTGCTAATCCTTGAATACCAATTCCAATGGGGCGATGGCGTTTATTGGACGTTT 53828 Query 62625 CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAA 62681 |||||||||| | || |||||||||| ||| |||| |||||| | |||| | |||| Sbjct 53827 CAGCTTCTGGGAGTGGGTAATAATTAACATCGATAACTTTATTTAAATTTTTTGTTACAA 53768 Query 62682 TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCG---CCCATC---TATTACAA 62735 | | |||| | | | | ||| ||||||||| | || || | | || | Sbjct 53767 CTTTTGTGACGATTT---TTAATTTTTCAAAATCAAAACTTTTCCTGTCGGGTTTAACGA 53711 Query 62736 ACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 62795 || ||| | |||| ||||| | ||||||||| || | |||| || | | |||| Sbjct 53710 ACTGGTTAACCGCAATTGATGCTAAATTACAAACTGCGATTTCATCAGGAGATGTGTATT 53651 Query 62796 GTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 62855 || || || ||||| | ||| |||| || || || ||||||| |||||| ||||| | Sbjct 53650 CAATGATTTCGGTGCATAAATTGCTACTTTTTATTGTACCTAAATGTTGTTGGTTACTTT 53591 Query 62856 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 62915 | ||||| || || ||||| | || ||||||| ||||||||||| ||||| | | Sbjct 53590 TGCGATTACAAGCGTCTTTATACAACATATATGGAGTTCCAGTTTCAATTTGAGACACAA 53531 Query 62916 TAATCGCTTTCCAGACGACTCGAGCCTTTATT------ATAGATTTGTATCTCTTTTC-- 62967 | || |||||||| | ||| || |||| | | |||| | || ||||| Sbjct 53530 TTATGGCTTTCCATAATTCTCTGGCGGGTATTTGGCGAACAAATTTTTTCCTTTTTTCGT 53471 Query 62968 -TCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAG 63026 ||||||||| | | || |||| | || |||||| || | || | Sbjct 53470 AATTTTCGTATAAT---TCCA------CGAATTTTTCCCCCCAACAATCAGATAAACCGG 53420 Query 63027 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63086 |||||| || |||||||| | ||||||| | || |||| || ||||||||||| | Sbjct 53419 GACATTGATGAGGACACATTAGCGACCACATTGAATCTTCCTCGACGCGTTTCATAAATA 53360 Query 63087 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63146 |||||||||||| | ||| ||||| |||||| | ||| ||| || || |||| Sbjct 53359 AATCAGGAATCCATAAAGCATAAAATAAATCTCTCGCCCTAACTTCTTCAGCCCCAGTAT 53300 Query 63147 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63206 | ||||| | || | || | | || ||| | |||||||||||| || || || || | Sbjct 53299 TTTTTTTTAAATTTAAAAAATCAACAACATCCGCATGCCACGGTTCTAAATAAATTGCAA 53240 Query 63207 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63266 ||||||| | ||| || || || ||||| | |||| ||| || |||||| |||| | Sbjct 53239 ACGCTCCAGGTCTTTTATTACCCCCTTGATCGACATATCGAGCTGTATTATTAAAAACCC 53180 Query 63267 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTG- 63325 |||||||| | | ||| || || ||||||| || || | ||| | | | | || Sbjct 53179 GTAACATTGGTACTAAACCGTTTGAAATACCATTAGTTCCAGCAATA-ATCGTGCCTTGT 53121 Query 63326 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 63385 || ||||||||| | | || ||||| || || |||| || || | || ||| Sbjct 53120 GCTCGAATATTATGGACGTTAACTCCAATTCCTCCCGCACTTTTTGATATAATAGCACAT 53061 Query 63386 CGTTTTA-ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 63444 || | || | | | | ||||| | || ||| ||| ||| | | || ||||| Sbjct 53060 TGTGAGATACAT-TTAAAAATGCCTTGGATTGAATCCTCCGGCATCATTACTAAGAAACA 53002 Query 63445 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAA 63504 |||||||| | ||| || | || |||||| || ||| ||||||||||| Sbjct 53001 TGACGACATTTGTGGGCGAGGTGTCGCTGCGGCAAATAAAGTCGGACTCGCGTGAGTAAA 52942 Query 63505 CCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGA 63562 | || ||||| | ||| |||||| || ||||||||||| || || || || | ||| Sbjct 52941 ATACTTCTCAGACATGTA-ATTGTAAGTTTCAATAGCTGATTCAATGTCTTCACCG-TGA 52884 Query 63563 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 63622 || || || || || ||||||||||| || || || | |||| | || || ||| ||| Sbjct 52883 ATCCCAACGGCCACGCGCATTAACATATGTTGGGGACGTTCAGCAATTTTTCCGTTGATT 52824 Query 63623 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63682 || | | || || ||| | ||||||||||||||||| || ||||| || || || Sbjct 52823 TTTAGGAGATATGAACGTTCGAGTGTTTTAAAACCAAAATAATTATATGAGAAATCACGA 52764 Query 63683 TCGTAAATAATA 63694 |||||||| ||| Sbjct 52763 TCGTAAATGATA 52752 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 63815 AATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCA 63874 ||| |||| || |||||||| || ||||| | | || |||||||| || || | ||| Sbjct 43457 AATTGTTTCTTCGTTTCTTTATGGAGATTAGTCATAGCAATTCTAGCAGCAAGTGTTGCA 43398 Query 63875 TAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCT 63934 ||||| ||||| | |||| | || || || |||| || || | |||||||| || Sbjct 43397 TAATCAGGATGGTCTGTAATTTTTGTAGCAGCGGTTTCAGCAGCTAAGGTGTCCAACTCA 43338 Query 63935 ACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 || || || || || ||| | ||||| ||||||||||| Sbjct 43337 ACTGTGGTAACGCCTGGATAAAGACCTTGAATAACCTTCAT 43297 >seq1159 Length=103958 Score = 351 bits (388), Expect = 1e-91 Identities = 613/889 (69%), Gaps = 5/889 (1%) Strand=Plus/Plus Query 32369 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 32428 ||||||||| || || || ||| || || |||||||| || || |||||| Sbjct 49831 TTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATCAGATATAAG 49890 Query 32429 TTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 32488 | ||| ||||| |||||||| || ||| || | ||||| | | || | ||||| | Sbjct 49891 ATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAGTTCAGTTAA 49950 Query 32489 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 32548 || | ||| || ||||| || || || ||| | | |||||||| || || | Sbjct 49951 TAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCATCCCGATTAA 50010 Query 32549 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608 |||| |||||||| |||| | |||||| |||||||| ||||| || ||||| Sbjct 50011 ACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATCGCGAATAAT 50070 Query 32609 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAA-ATGTTTAAACATCAAACATGCGA 32667 | ||| ||| | ||| | ||||| || | |||||| ||||| || | Sbjct 50071 ACTCGTTATACGTTCCTTTGACGGCTTTTG-AATAAGATATGTAAACAATAAACAAGCAA 50129 Query 32668 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 32727 | ||| | |||| ||| || || | ||||||||| || |||||||| | ||||||| Sbjct 50130 ATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTTAAACCGGGCA 50189 Query 32728 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 32787 ||| || |||||||| | |||||| || | ||||| ||| ||||||||||| || | Sbjct 50190 TTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAGAAAATACCCT 50249 Query 32788 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCACT 32844 | || |||||||| |||| | | || ||| || ||| | | | ||||| | Sbjct 50250 CAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTACTAATCCAAT 50309 Query 32845 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 32904 || ||||||||| || |||||||| |||||||| | || || || || ||||| | | Sbjct 50310 TTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCGTTAAATAAAA 50369 Query 32905 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 32964 | | ||||| || ||| || ||| || ||||| || | || |||||||| || | Sbjct 50370 ATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTACATTTCAGAGT 50429 Query 32965 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTT 33024 |||| |||||||| || |||||||| ||||| || || | || || || | ||| |||| Sbjct 50430 GAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTTACCTGAACTT 50489 Query 33025 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33084 || || ||| ||||| |||||||||| || || ||||| ||| || |||||||| | Sbjct 50490 CTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCAGCAAAAAAGG 50549 Query 33085 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATAT 33144 | || ||||| ||||||| ||||| |||| | | | ||||| ||||| || Sbjct 50550 CTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTTGCCAATGATTGAGAT 50609 Query 33145 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 33204 |||| || | ||| |||||||| ||||||||||| || || |||| ||| || | Sbjct 50610 CTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCGCCTGTTTGTATTTCG 50669 Query 33205 TCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATT 33253 ||| || ||| |||| | ||| ||||||| || || | ||||||| Sbjct 50670 CCCAAATATCAGGATACTCAATGGGAAAAACGACGAAACGTCTTGGATT 50718 >seq104 Length=333490 Score = 93.3 bits (102), Expect = 5e-14 Identities = 273/403 (68%), Gaps = 27/403 (7%) Strand=Plus/Plus Query 155846 TATGGTAAAGGAGCAAAGGGTGGTATTATGGCAGTCTTTCTAATGGGTTGTTACGATGAT 155905 ||||||| || ||| ||||| || ||| | | ||||||||||||||||||||| Sbjct 112952 TATGGTACTGGTAAAAAAGGTGGAATGATGTCGATTTTTCTAATGGGTTGTTACGATCCA 113011 Query 155906 GAATCCGGTAAATGGAAG-ACGGTAACTAAATGTTCA----GGACACGATGATAATACGT 155960 |||| | || | || || || || ||||| |||||||||||||| || | Sbjct 113012 -AATCGTGATTATTTTTGTACTGTTACCAAG-GTTCATACAGGACACGATGATAAAACAT 113069 Query 155961 T--AAGGGTTTTGCAAGACCAATTAACGAT-GGTTAAAATTAACAAG-GATCCCaaaaaa 156016 | || || || ||| | || | |||| | ||||| ||| | ||| ||| ||| Sbjct 113070 TAGAACGGCTT--CAAAATGAACT--CGATATGATAAAAATAAGTGGAGATATCAATAAA 113125 Query 156017 aTTCCAGAGTGGTT-GGTAGTTAATAAAATCTAT-ATTCCCGATTTTGTAGTAGAGGATC 156074 || || | ||||| || || | ||| | || || |||||||| |||| | | || | Sbjct 113126 ATACCTAAATGGTTACGTTGT--ACGAAAACAATGATCCCCGATTTAGTAGCAAAAGACC 113183 Query 156075 CGAAA---CAATCTCAAATATGGGAAATTTCAGGAGCAGAGTTTACAC-CTTCCAAGTCA 156130 | ||| ||| || | ||||||||| | || || || || || | | |||| Sbjct 113184 CCAAAAACCAACCT---GTTTGGGAAATTACGGGCGCGGAATTCACTCAACACGAAGT-T 113239 Query 156131 CATACAGCGAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATTAGAGAAGATAAA 156190 || || || |||||||| || ||| | || || || |||| | |||| ||||||| || Sbjct 113240 CACACCGCAAATGGAATTTCAATTCGTTTCCCAAGGGTTACAAAGATTCGAGAAGAAAAG 113299 Query 156191 ACGTGGAAAGAATCTACTCATCTAAACGATTTAGTAAATTTGA 156233 || |||||||| | ||| || |||| || |||| ||| |||| Sbjct 113300 ACTTGGAAAGAGGCAACTAATTTAAATGAATTAGAAAAATTGA 113342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633575947329200