Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1284 603 1e-167
seq1159 351 1e-91
seq104 93.3 5e-14
>seq1284
Length=72753
Score = 603 bits (668), Expect = 1e-167
Identities = 1263/1872 (67%), Gaps = 45/1872 (2%)
Strand=Plus/Minus
Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909
|||||||||||||| | |||||||||||| | || ||| |||||||| ||||| ||
Sbjct 54605 GTGAATTGAATGGGTTGAGCTGCGGGTTTCGTTCTTAAATAATACATTCCTGTTTTAAGT 54546
Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969
|| | | ||| ||||||||||| || |||| ||| ||| |||| | ||||
Sbjct 54545 CCTTGTCGCCAGCCGTAAAAATGAATTGATGTTAAAACGGAGTAAGTCGGTTTGGCTACG 54486
Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029
| | ||| | |||||| |||||||||||||| || || | | || || |||||
Sbjct 54485 TAAAGATTTAAAGATTGGCTTTGATCGATGAAAGCCCCTCGAGCCGCGGCTTGATTTATG 54426
Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089
|| || | || ||||||||||| |||||||||| | || | ||| || || |
Sbjct 54425 ATGCATTTATTTGAAATTTCCCAAACTGTTTTATAAATTTCTTTTAAATCGTCAGGGA-- 54368
Query 62090 TTTG-----TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 62144
|||| | || ||||| || || | || ||| || || ||| || || |||||
Sbjct 54367 TTTGGGGGATGTTTTGAATTGAGCCGCGATTTGCAATTATTTGATTTTTCATTAAATCAT 54308
Query 62145 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 62204
||| | || ||||||||| |||| | | || ||||||| ||||| || || |
Sbjct 54307 CCCAAAGCCCCCTTTCGGTTAAATCTCTTAATAAGTGGTGATTAACAACTTGGAAATCCC 54248
Query 62205 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 62264
|||| | |||||| || || |||||||| || || ||||| | ||| || |||||||
Sbjct 54247 CAGAAAGTACTCTTCGCGTATAAATATTCGATGTGTAAGGTTCAAAAGATTCGTTATTTC 54188
Query 62265 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62324
| | ||||||||| ||||| || || ||||| || || | | |||| |||||| | |
Sbjct 54187 CTAGAATTTGAGCTGTTGAAGCTGTTGGCATTGGGGCTAAGAGTAAAGAATTTCTTATTC 54128
Query 62325 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 62384
||| | | | ||||| ||||||| || ||||| ||| | ||| || || |||
Sbjct 54127 CGTGTTTATTAATTTTTTCTTTTAATTCTTTCCAATCCCATAAATCAGATGGAGTAACAT 54068
Query 62385 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATG 62444
||| | || || ||||| | || ||| || || || ||
Sbjct 54067 TCCACATATCGTATTGCAAGATTCCTTTACTAACAGGGGAACCTTGGTAAGTTTCATAAA 54008
Query 62445 GTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGA 62504
|| || || || |||| ||||||||| || ||||| ||||||||||||| ||||| |
Sbjct 54007 CCCCGTCTTTTTCGGCTAATTCACAACTAGCTTCTAAGGCACCGTAATAAAGCGTTTCAA 53948
Query 62505 AGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAA 62564
|||| | | |||| | || ||||| |||||||||| || | | | |||||
Sbjct 53947 AGATTTGCACGTTTAATTTATGGGCTTCGGGGCTATCAAAGGGGAGTCTCATCAAAATAA 53888
Query 62565 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 62624
| || |||||||||||||||| |||||| || || || | ||| | ||||| || |||
Sbjct 53887 AAGCATCTGCTAATCCTTGAATACCAATTCCAATGGGGCGATGGCGTTTATTGGACGTTT 53828
Query 62625 CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAA 62681
|||||||||| | || |||||||||| ||| |||| |||||| | |||| | ||||
Sbjct 53827 CAGCTTCTGGGAGTGGGTAATAATTAACATCGATAACTTTATTTAAATTTTTTGTTACAA 53768
Query 62682 TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCG---CCCATC---TATTACAA 62735
| | |||| | | | | ||| ||||||||| | || || | | || |
Sbjct 53767 CTTTTGTGACGATTT---TTAATTTTTCAAAATCAAAACTTTTCCTGTCGGGTTTAACGA 53711
Query 62736 ACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 62795
|| ||| | |||| ||||| | ||||||||| || | |||| || | | ||||
Sbjct 53710 ACTGGTTAACCGCAATTGATGCTAAATTACAAACTGCGATTTCATCAGGAGATGTGTATT 53651
Query 62796 GTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 62855
|| || || ||||| | ||| |||| || || || ||||||| |||||| ||||| |
Sbjct 53650 CAATGATTTCGGTGCATAAATTGCTACTTTTTATTGTACCTAAATGTTGTTGGTTACTTT 53591
Query 62856 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 62915
| ||||| || || ||||| | || ||||||| ||||||||||| ||||| | |
Sbjct 53590 TGCGATTACAAGCGTCTTTATACAACATATATGGAGTTCCAGTTTCAATTTGAGACACAA 53531
Query 62916 TAATCGCTTTCCAGACGACTCGAGCCTTTATT------ATAGATTTGTATCTCTTTTC-- 62967
| || |||||||| | ||| || |||| | | |||| | || |||||
Sbjct 53530 TTATGGCTTTCCATAATTCTCTGGCGGGTATTTGGCGAACAAATTTTTTCCTTTTTTCGT 53471
Query 62968 -TCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAG 63026
||||||||| | | || |||| | || |||||| || | || |
Sbjct 53470 AATTTTCGTATAAT---TCCA------CGAATTTTTCCCCCCAACAATCAGATAAACCGG 53420
Query 63027 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63086
|||||| || |||||||| | ||||||| | || |||| || ||||||||||| |
Sbjct 53419 GACATTGATGAGGACACATTAGCGACCACATTGAATCTTCCTCGACGCGTTTCATAAATA 53360
Query 63087 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63146
|||||||||||| | ||| ||||| |||||| | ||| ||| || || ||||
Sbjct 53359 AATCAGGAATCCATAAAGCATAAAATAAATCTCTCGCCCTAACTTCTTCAGCCCCAGTAT 53300
Query 63147 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63206
| ||||| | || | || | | || ||| | |||||||||||| || || || || |
Sbjct 53299 TTTTTTTTAAATTTAAAAAATCAACAACATCCGCATGCCACGGTTCTAAATAAATTGCAA 53240
Query 63207 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63266
||||||| | ||| || || || ||||| | |||| ||| || |||||| |||| |
Sbjct 53239 ACGCTCCAGGTCTTTTATTACCCCCTTGATCGACATATCGAGCTGTATTATTAAAAACCC 53180
Query 63267 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTG- 63325
|||||||| | | ||| || || ||||||| || || | ||| | | | | ||
Sbjct 53179 GTAACATTGGTACTAAACCGTTTGAAATACCATTAGTTCCAGCAATA-ATCGTGCCTTGT 53121
Query 63326 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 63385
|| ||||||||| | | || ||||| || || |||| || || | || |||
Sbjct 53120 GCTCGAATATTATGGACGTTAACTCCAATTCCTCCCGCACTTTTTGATATAATAGCACAT 53061
Query 63386 CGTTTTA-ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 63444
|| | || | | | | ||||| | || ||| ||| ||| | | || |||||
Sbjct 53060 TGTGAGATACAT-TTAAAAATGCCTTGGATTGAATCCTCCGGCATCATTACTAAGAAACA 53002
Query 63445 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAA 63504
|||||||| | ||| || | || |||||| || ||| |||||||||||
Sbjct 53001 TGACGACATTTGTGGGCGAGGTGTCGCTGCGGCAAATAAAGTCGGACTCGCGTGAGTAAA 52942
Query 63505 CCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGA 63562
| || ||||| | ||| |||||| || ||||||||||| || || || || | |||
Sbjct 52941 ATACTTCTCAGACATGTA-ATTGTAAGTTTCAATAGCTGATTCAATGTCTTCACCG-TGA 52884
Query 63563 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 63622
|| || || || || ||||||||||| || || || | |||| | || || ||| |||
Sbjct 52883 ATCCCAACGGCCACGCGCATTAACATATGTTGGGGACGTTCAGCAATTTTTCCGTTGATT 52824
Query 63623 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63682
|| | | || || ||| | ||||||||||||||||| || ||||| || || ||
Sbjct 52823 TTTAGGAGATATGAACGTTCGAGTGTTTTAAAACCAAAATAATTATATGAGAAATCACGA 52764
Query 63683 TCGTAAATAATA 63694
|||||||| |||
Sbjct 52763 TCGTAAATGATA 52752
Score = 84.2 bits (92), Expect = 3e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 63815 AATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCA 63874
||| |||| || |||||||| || ||||| | | || |||||||| || || | |||
Sbjct 43457 AATTGTTTCTTCGTTTCTTTATGGAGATTAGTCATAGCAATTCTAGCAGCAAGTGTTGCA 43398
Query 63875 TAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCT 63934
||||| ||||| | |||| | || || || |||| || || | |||||||| ||
Sbjct 43397 TAATCAGGATGGTCTGTAATTTTTGTAGCAGCGGTTTCAGCAGCTAAGGTGTCCAACTCA 43338
Query 63935 ACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975
|| || || || || ||| | ||||| |||||||||||
Sbjct 43337 ACTGTGGTAACGCCTGGATAAAGACCTTGAATAACCTTCAT 43297
>seq1159
Length=103958
Score = 351 bits (388), Expect = 1e-91
Identities = 613/889 (69%), Gaps = 5/889 (1%)
Strand=Plus/Plus
Query 32369 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 32428
||||||||| || || || ||| || || |||||||| || || ||||||
Sbjct 49831 TTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATCAGATATAAG 49890
Query 32429 TTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 32488
| ||| ||||| |||||||| || ||| || | ||||| | | || | ||||| |
Sbjct 49891 ATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAGTTCAGTTAA 49950
Query 32489 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 32548
|| | ||| || ||||| || || || ||| | | |||||||| || || |
Sbjct 49951 TAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCATCCCGATTAA 50010
Query 32549 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608
|||| |||||||| |||| | |||||| |||||||| ||||| || |||||
Sbjct 50011 ACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATCGCGAATAAT 50070
Query 32609 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAA-ATGTTTAAACATCAAACATGCGA 32667
| ||| ||| | ||| | ||||| || | |||||| ||||| || |
Sbjct 50071 ACTCGTTATACGTTCCTTTGACGGCTTTTG-AATAAGATATGTAAACAATAAACAAGCAA 50129
Query 32668 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 32727
| ||| | |||| ||| || || | ||||||||| || |||||||| | |||||||
Sbjct 50130 ATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTTAAACCGGGCA 50189
Query 32728 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 32787
||| || |||||||| | |||||| || | ||||| ||| ||||||||||| || |
Sbjct 50190 TTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAGAAAATACCCT 50249
Query 32788 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCACT 32844
| || |||||||| |||| | | || ||| || ||| | | | ||||| |
Sbjct 50250 CAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTACTAATCCAAT 50309
Query 32845 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 32904
|| ||||||||| || |||||||| |||||||| | || || || || ||||| | |
Sbjct 50310 TTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCGTTAAATAAAA 50369
Query 32905 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 32964
| | ||||| || ||| || ||| || ||||| || | || |||||||| || |
Sbjct 50370 ATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTACATTTCAGAGT 50429
Query 32965 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTT 33024
|||| |||||||| || |||||||| ||||| || || | || || || | ||| ||||
Sbjct 50430 GAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTTACCTGAACTT 50489
Query 33025 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33084
|| || ||| ||||| |||||||||| || || ||||| ||| || |||||||| |
Sbjct 50490 CTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCAGCAAAAAAGG 50549
Query 33085 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATAT 33144
| || ||||| ||||||| ||||| |||| | | | ||||| ||||| ||
Sbjct 50550 CTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTTGCCAATGATTGAGAT 50609
Query 33145 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 33204
|||| || | ||| |||||||| ||||||||||| || || |||| ||| || |
Sbjct 50610 CTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCGCCTGTTTGTATTTCG 50669
Query 33205 TCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATT 33253
||| || ||| |||| | ||| ||||||| || || | |||||||
Sbjct 50670 CCCAAATATCAGGATACTCAATGGGAAAAACGACGAAACGTCTTGGATT 50718
>seq104
Length=333490
Score = 93.3 bits (102), Expect = 5e-14
Identities = 273/403 (68%), Gaps = 27/403 (7%)
Strand=Plus/Plus
Query 155846 TATGGTAAAGGAGCAAAGGGTGGTATTATGGCAGTCTTTCTAATGGGTTGTTACGATGAT 155905
||||||| || ||| ||||| || ||| | | |||||||||||||||||||||
Sbjct 112952 TATGGTACTGGTAAAAAAGGTGGAATGATGTCGATTTTTCTAATGGGTTGTTACGATCCA 113011
Query 155906 GAATCCGGTAAATGGAAG-ACGGTAACTAAATGTTCA----GGACACGATGATAATACGT 155960
|||| | || | || || || || ||||| |||||||||||||| || |
Sbjct 113012 -AATCGTGATTATTTTTGTACTGTTACCAAG-GTTCATACAGGACACGATGATAAAACAT 113069
Query 155961 T--AAGGGTTTTGCAAGACCAATTAACGAT-GGTTAAAATTAACAAG-GATCCCaaaaaa 156016
| || || || ||| | || | |||| | ||||| ||| | ||| ||| |||
Sbjct 113070 TAGAACGGCTT--CAAAATGAACT--CGATATGATAAAAATAAGTGGAGATATCAATAAA 113125
Query 156017 aTTCCAGAGTGGTT-GGTAGTTAATAAAATCTAT-ATTCCCGATTTTGTAGTAGAGGATC 156074
|| || | ||||| || || | ||| | || || |||||||| |||| | | || |
Sbjct 113126 ATACCTAAATGGTTACGTTGT--ACGAAAACAATGATCCCCGATTTAGTAGCAAAAGACC 113183
Query 156075 CGAAA---CAATCTCAAATATGGGAAATTTCAGGAGCAGAGTTTACAC-CTTCCAAGTCA 156130
| ||| ||| || | ||||||||| | || || || || || | | ||||
Sbjct 113184 CCAAAAACCAACCT---GTTTGGGAAATTACGGGCGCGGAATTCACTCAACACGAAGT-T 113239
Query 156131 CATACAGCGAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATTAGAGAAGATAAA 156190
|| || || |||||||| || ||| | || || || |||| | |||| ||||||| ||
Sbjct 113240 CACACCGCAAATGGAATTTCAATTCGTTTCCCAAGGGTTACAAAGATTCGAGAAGAAAAG 113299
Query 156191 ACGTGGAAAGAATCTACTCATCTAAACGATTTAGTAAATTTGA 156233
|| |||||||| | ||| || |||| || |||| ||| ||||
Sbjct 113300 ACTTGGAAAGAGGCAACTAATTTAAATGAATTAGAAAAATTGA 113342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633575947329200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |