Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq241 156 4e-33
seq62 91.5 1e-13
>seq241
Length=949647
Score = 156 bits (172), Expect = 4e-33
Identities = 176/233 (76%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || ||||| || || || || ||| ||||||| | |||||||| | ||
Sbjct 167417 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTC 167476
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||| || || || | || |||| |||| || ||||| ||||| || ||||| ||
Sbjct 167477 TGATACCATTGAA--AATGTTAAAGCTAAAATCCAA-GACAAGGAAGGAATCCCACCAGA 167533
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | || || ||||| |||||||||||||||| ||| ||| | |||||
Sbjct 167534 TCAACAACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTA 167593
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||| |||||||||||||| || || |||||||| | ||| ||||||| ||||
Sbjct 167594 CAACATTCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGGAA 167646
Score = 152 bits (168), Expect = 4e-32
Identities = 163/214 (76%), Gaps = 1/214 (0%)
Strand=Plus/Plus
Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053
|||| ||||| || || || || || ||||| |||||| ||||||| | || || |||
Sbjct 165589 AACAGATGCAGATTTTCGTGAAAACCTTGACTGGTAAAACCATCACGTTAGAGGTCGAGC 165648
Query 25054 CGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
| ||||||||||| || ||||| |||||| |||||||| ||||| ||||| |
Sbjct 165649 CATCTGACACTATTGAAAATGTGAAGGCGAAAATCCAGGACAAAGAGGGGATCCCACCAG 165708
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
||||||| ||| | || |||||||| |||||||||||||||| || || | |||||
Sbjct 165709 ACCAACAACGGTTGATCTTTGCCGGAAAACAATTAGAAGATGGACGTACCCTTTCCGATT 165768
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGT 25207
||||||| ||||| ||||| || || || || ||
Sbjct 165769 ACAATATCCAAAAGGAATCAACTCTCCACTTGGT 165802
Score = 150 bits (166), Expect = 2e-31
Identities = 162/212 (76%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| ||||| || || |||||| |||||||| | ||||| || | ||
Sbjct 166505 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTC 166564
Query 25058 TGACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| ||||| || | | |||| |||| || || ||||||||||| ||||| ||||
Sbjct 166565 TGATACTATTGAAAACGTTAAAGCTAAAATCCAG-GATAAAGAAGGGATCCCACCAGACC 166623
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || | || || ||||| |||||| | ||||||| || ||| | ||||| |
Sbjct 166624 AACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATA 166683
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTG 25208
| || |||||||||||||| || |||||||||
Sbjct 166684 ACATCCAAAAAGAATCCACCCTCCATTTAGTG 166715
Score = 149 bits (164), Expect = 5e-31
Identities = 177/237 (75%), Gaps = 6/237 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || ||||| || || || || ||| ||||||| | |||||||| | ||
Sbjct 167645 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTC 167704
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||| ||||| || | || |||| |||| || ||||| ||||| || ||||| ||
Sbjct 167705 TGATACTATTGAA--AATGTTAAAGCTAAAATCCAA-GACAAGGAAGGAATCCCACCAGA 167761
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||||| | ||||| || || |||||||| ||||||| || || | |||||
Sbjct 167762 TCAACAGCGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTA 167821
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231
|||||| ||||| |||||||| || |||||||| || | ||| | || ||||||||
Sbjct 167822 CAATATCCAAAAGGAATCCACTCTGCATTTAGTTCTTCGCCTACGTGGTGGAAATTA 167878
Score = 147 bits (162), Expect = 2e-30
Identities = 174/233 (75%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| ||||| || || |||||| |||||||| | ||||| || | ||
Sbjct 166277 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATC 166336
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || | || |||| || | || || || ||||| || ||||| ||
Sbjct 166337 CGACACCATTGAA--AATGTTAAAGCTAAGATCCAA-GATAAGGAAGGAATCCCACCAGA 166393
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | || ||||| || |||||||||||||||| |||||| | |||||
Sbjct 166394 TCAACAACGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTA 166453
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||| || || ||||||||||| || |||||||| | || | ||||||||||
Sbjct 166454 CAACATCCAGAAAGAATCCACCCTTCATTTAGTATTGAGATTGAGAGGAGGAA 166506
Score = 147 bits (162), Expect = 2e-30
Identities = 174/233 (75%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| || |||||||| || ||| | || ||| | ||||| ||| | ||
Sbjct 167189 AATGCAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATC 167248
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||| || || ||| | || |||| |||| || ||||| ||||| || ||||| ||
Sbjct 167249 TGATACCATTGAG--AATGTTAAAGCTAAAATCCAA-GACAAGGAAGGAATCCCACCAGA 167305
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | || || ||||| |||||| | ||||||| ||| ||| | |||||
Sbjct 167306 TCAACAACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTA 167365
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||| || ||||||||||| || || |||||||| | ||| ||||||| ||||
Sbjct 167366 CAACATCCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGGAA 167418
Score = 132 bits (146), Expect = 4e-26
Identities = 171/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| || || ||||| || ||| | || || | ||||| ||| | ||
Sbjct 166049 AATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATC 166108
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||| || || || | || |||| |||| || || |||||||| ||||| || ||
Sbjct 166109 TGATACCATTGAA--AATGTTAAAGCTAAAATCCAG-GATAAAGAAGGAATTCCTCCAGA 166165
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | || ||||| || |||||||||||||| | |||||| | |||||
Sbjct 166166 TCAACAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTA 166225
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||| || ||||||||||| || || ||||| ||| | || | ||||||||||
Sbjct 166226 CAACATCCAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGAGGAGGAA 166278
Score = 127 bits (140), Expect = 2e-24
Identities = 169/232 (73%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| || ||||||||| ||||||| | ||||| || | |||
Sbjct 166734 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCT 166793
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || || || | || |||| || | || || |||||||| ||||| || ||
Sbjct 166794 GATACAATTGAA--AATGTTAAAGCTAAGATCCAG-GATAAAGAAGGAATTCCTCCAGAT 166850
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || | || ||||| || |||||| | ||||||| || ||| | || |||
Sbjct 166851 CAACAACGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTAC 166910
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|| || ||||||||||| || || |||||||| | || | ||||| ||||
Sbjct 166911 AACATCCAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGAGGTGGAA 166962
Score = 114 bits (126), Expect = 1e-20
Identities = 167/233 (72%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || || || || |||||||| || || | || ||| | ||||| ||| | ||
Sbjct 165821 AATGCAGATCTTCGTCAAAACTTTGACTGGAAAGACTATTACATTGGAAGTTGAGCCATC 165880
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || | || |||| || | ||| || || ||||| || ||||| ||
Sbjct 165881 CGACACCATAGAA--AATGTTAAAGCTAAGATTCAA-GATAAGGAAGGAATCCCACCAGA 165937
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | || ||||| || |||||||| ||||||| || ||| | |||||
Sbjct 165938 TCAACAACGTTTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACTCTTTCTGATTA 165997
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|||||| ||||| ||||| || || ||||| || | || | ||||| ||||
Sbjct 165998 CAATATCCAAAAGGAATCAACTCTTCATTTGGTATTGAGATTGAGAGGTGGAA 166050
Score = 114 bits (126), Expect = 1e-20
Identities = 167/233 (72%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| || |||||||| || ||| | || || | ||||| ||| | ||
Sbjct 166961 AATGCAGATTTTTGTCAAAACTTTGACTGGAAAAACTATTACTTTAGAAGTTGAGCCATC 167020
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||| || || || | || |||| |||| || || || ||||| ||||| || ||
Sbjct 167021 TGATACCATTGAA--AATGTTAAAGCTAAAATCCAG-GATAAGGAAGGAATTCCTCCAGA 167077
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | || || ||||| |||||| | ||||||| |||||| | |||||
Sbjct 167078 TCAACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGGCGCACTCTTTCTGATTA 167137
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|||||| ||||| ||||| || || || || || | || | ||||| ||||
Sbjct 167138 CAATATCCAAAAGGAATCTACTCTCCACTTGGTATTGAGATTGAGAGGTGGAA 167190
>seq62
Length=648032
Score = 91.5 bits (100), Expect = 1e-13
Identities = 166/240 (69%), Gaps = 6/240 (3%)
Strand=Plus/Plus
Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054
|| ||||||||| || ||||| | ||| || || ||| ||||||| | |||||||| |
Sbjct 445525 AAGAATGCAAATCTTCGTAAAAAGTTTAACTGGAAAAACCATCACCTTGGAAGTGGAACC 445584
Query 25055 GTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111
|||| ||||| | | || ||| || | ||| ||||| ||| ||||||||||
Sbjct 445585 TACTGATACTATTGGA--AATGTAAAAGTTAAGATTCAA-GACAAGGAAAGGATTCCACC 445641
Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171
|| |||||||| | ||||| | ||| |||| ||||||| || || | ||
Sbjct 445642 GGATCAACAGCGTTTAATTTTCCATCGTAAAGAATTGGAAGATGGACGTACCCTTTCAGA 445701
Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231
||||||||| | || |||| || || ||||||| | | ||| | || ||||| ||
Sbjct 445702 TTACAATATCTATAAGAAATCTACTCTGTATTTAGTTATTCGCCTACGTGGTGGAAAATA 445761
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/212 (69%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 25005 ATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACT 25064
|| || ||||| ||||| || || || |||||| | | |||||| | ||||| ||
Sbjct 445319 ATCTTCGTAAAAACTTTAACTGGAGAAATCATCACCTTAGGAGTGGAACCTTCTGATACC 445378
Query 25065 ATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAG 25121
|| || | || |||| |||| || || | ||||| || ||||| || ||||
Sbjct 445379 ATTGAA--AATGTTAAAGCTAAAATCCAA-GATACGGAAGGAATCCCACCAGATGAACAA 445435
Query 25122 CGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATT 25181
|| | || || | || |||||| | ||||||| ||| ||| | |||||||| |||
Sbjct 445436 CGTTTAATCTTCTCTGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACATT 445495
Query 25182 CAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213
||||||||||| || || || || || ||||
Sbjct 445496 CAAAAAGAATCAACCCTCCAGTTGGTAATAAG 445527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433290625053755
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |