Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1159 394 1e-104 seq77 134 2e-26 seq747 132 5e-26 seq122 132 5e-26 seq4653 131 2e-25 seq15 131 2e-25 seq892 129 7e-25 seq350 129 7e-25 >seq1159 Length=103958 Score = 394 bits (436), Expect = 1e-104 Identities = 655/935 (70%), Gaps = 12/935 (1%) Strand=Plus/Plus Query 92793 AACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAA 92852 ||||||| ||||||||| |||||||| ||||| ||||||||||| || || || Sbjct 49822 AACACCAGCTTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATC 49881 Query 92853 AGATATCGAATTCACTAGTG--ATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAA 92910 |||||| ||||| | | |||||| | | || || | ||||||| | ||| Sbjct 49882 AGATATAAGATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACA-ACCAA 49940 Query 92911 CT-CGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCA 92969 | | ||||| | ||| || ||||| || |||||||| ||||| |||| ||||||| Sbjct 49941 GTTCAGTTAATAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCA 50000 Query 92970 TTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTT 93029 | || | | || || || ||||| || || || || || | || ||| |||| || | Sbjct 50001 TCCCGATTAAACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCAT 50060 Query 93030 CTTTCAAGATTTCTA-TTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATT 93088 | || | | || ||| | |||| || ||||| | | ||| | ||| | Sbjct 50061 CGCG-AATAATACTCGTTATACGTTCCTTTGACGGCTTTTGAATAAGATATGTAAACAAT 50119 Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 || || ||||| ||| |||||||||||| || || || || || ||||| || ||| Sbjct 50120 AAACAAGCAAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTT 50179 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 ||||| || | | || || || || | |||||| || | |||||||| || ||||| Sbjct 50180 AAACCGGGCATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAG 50239 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268 || ||||| || ||||| ||||| || || | |||||| ||||| | ||| ||||| Sbjct 50240 AAAATACCCTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTA 50299 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 || ||||| |||||||||||||| ||||| || |||| |||||| || |||||||| ||| Sbjct 50300 CTAATCCAATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCG 50359 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 ||||||| | ||| | | | ||| || || || || ||||||| ||| Sbjct 50360 TTAAATAAAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTAC 50419 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 |||||||| || | ||| || || |||||||| || ||||| ||||| | |||||||| Sbjct 50420 ATTTCAGAGTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTT 50479 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 | ||| ||||||||| ||| | || || | |||||| || || || ||||| || || Sbjct 50480 ACCTGAACTTCTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCA 50539 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAAGCTTATCCCA 93567 |||||||| || || | ||| |||||||| || | ||| |||| || | ||| Sbjct 50540 GCAAAAAAGGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTT-TGCCA 50598 Query 93568 ATCGGAT--AGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || ||| |||||||| |||||||| |||||||| |||||||| || ||||| || Sbjct 50599 AT--GATTGAGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCGCC 50656 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGG 93685 | |||||| | |||| || || |||| | ||| ||||| | ||| ||||| | || Sbjct 50657 TGTTTGTATTTCGCCCAAATATCAGGATACTCAATGGGAAAAACGACGAAACGTCTTGGA 50716 Query 93686 TTATCTTTTAGTAACGGCTCTAGTTGTGGGTCAAA 93720 ||||| ||||| || || | || ||| || || Sbjct 50717 TTATCACGAAGTAAAGGTTCAATTTTTGGATCGAA 50751 >seq77 Length=1690356 Score = 134 bits (148), Expect = 2e-26 Identities = 94/105 (90%), Gaps = 4/105 (4%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 965969 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 966028 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA--TTATTATTGGAATTTT 126365 ||||||||||||||||||||||||||| || || || |||||| Sbjct 966029 GTGGGTTCGAACCCCACACCTGACAAAACTTTTTTTTTTAATTTT 966073 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 987772 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 987713 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 987712 GTGGGTTCGAACCCCACACCTGACAAA 987686 >seq747 Length=89925 Score = 132 bits (146), Expect = 5e-26 Identities = 87/95 (92%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 83247 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 83188 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||||||||||||||||||||| || || || Sbjct 83187 GTGGGTTCGAACCCCACACCTGACAATTTCTTTTT 83153 >seq122 Length=217030 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 76514 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 76455 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 76454 GTGGGTTCGAACCCCACACCTGACAAA 76428 >seq4653 Length=3813 Score = 131 bits (144), Expect = 2e-25 Identities = 81/86 (94%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| Sbjct 359 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGCG 418 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||| Sbjct 419 TGGGTTCGAACCCCACACCTGACAAA 444 >seq15 Length=547635 Score = 131 bits (144), Expect = 2e-25 Identities = 81/86 (94%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| Sbjct 357788 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGCG 357847 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||| Sbjct 357848 TGGGTTCGAACCCCACACCTGACAAA 357873 >seq892 Length=179932 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||| Sbjct 115915 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGC 115856 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 115855 GTGGGTTCGAACCCCACACCTGACA 115831 >seq350 Length=74739 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 68607 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 68666 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 68667 GTGGGTTCGAACCCCACACCTGACA 68691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556811538701480