Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1159 394 1e-104
seq77 134 2e-26
seq747 132 5e-26
seq122 132 5e-26
seq4653 131 2e-25
seq15 131 2e-25
seq892 129 7e-25
seq350 129 7e-25
>seq1159
Length=103958
Score = 394 bits (436), Expect = 1e-104
Identities = 655/935 (70%), Gaps = 12/935 (1%)
Strand=Plus/Plus
Query 92793 AACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAA 92852
||||||| ||||||||| |||||||| ||||| ||||||||||| || || ||
Sbjct 49822 AACACCAGCTTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATC 49881
Query 92853 AGATATCGAATTCACTAGTG--ATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAA 92910
|||||| ||||| | | |||||| | | || || | ||||||| | |||
Sbjct 49882 AGATATAAGATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACA-ACCAA 49940
Query 92911 CT-CGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCA 92969
| | ||||| | ||| || ||||| || |||||||| ||||| |||| |||||||
Sbjct 49941 GTTCAGTTAATAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCA 50000
Query 92970 TTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTT 93029
| || | | || || || ||||| || || || || || | || ||| |||| || |
Sbjct 50001 TCCCGATTAAACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCAT 50060
Query 93030 CTTTCAAGATTTCTA-TTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATT 93088
| || | | || ||| | |||| || ||||| | | ||| | ||| |
Sbjct 50061 CGCG-AATAATACTCGTTATACGTTCCTTTGACGGCTTTTGAATAAGATATGTAAACAAT 50119
Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148
|| || ||||| ||| |||||||||||| || || || || || ||||| || |||
Sbjct 50120 AAACAAGCAAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTT 50179
Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208
||||| || | | || || || || | |||||| || | |||||||| || |||||
Sbjct 50180 AAACCGGGCATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAG 50239
Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268
|| ||||| || ||||| ||||| || || | |||||| ||||| | ||| |||||
Sbjct 50240 AAAATACCCTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTA 50299
Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328
|| ||||| |||||||||||||| ||||| || |||| |||||| || |||||||| |||
Sbjct 50300 CTAATCCAATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCG 50359
Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388
||||||| | ||| | | | ||| || || || || ||||||| |||
Sbjct 50360 TTAAATAAAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTAC 50419
Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448
|||||||| || | ||| || || |||||||| || ||||| ||||| | ||||||||
Sbjct 50420 ATTTCAGAGTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTT 50479
Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508
| ||| ||||||||| ||| | || || | |||||| || || || ||||| || ||
Sbjct 50480 ACCTGAACTTCTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCA 50539
Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAAGCTTATCCCA 93567
|||||||| || || | ||| |||||||| || | ||| |||| || | |||
Sbjct 50540 GCAAAAAAGGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTT-TGCCA 50598
Query 93568 ATCGGAT--AGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625
|| ||| |||||||| |||||||| |||||||| |||||||| || ||||| ||
Sbjct 50599 AT--GATTGAGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCGCC 50656
Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGG 93685
| |||||| | |||| || || |||| | ||| ||||| | ||| ||||| | ||
Sbjct 50657 TGTTTGTATTTCGCCCAAATATCAGGATACTCAATGGGAAAAACGACGAAACGTCTTGGA 50716
Query 93686 TTATCTTTTAGTAACGGCTCTAGTTGTGGGTCAAA 93720
||||| ||||| || || | || ||| || ||
Sbjct 50717 TTATCACGAAGTAAAGGTTCAATTTTTGGATCGAA 50751
>seq77
Length=1690356
Score = 134 bits (148), Expect = 2e-26
Identities = 94/105 (90%), Gaps = 4/105 (4%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||
Sbjct 965969 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 966028
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA--TTATTATTGGAATTTT 126365
||||||||||||||||||||||||||| || || || ||||||
Sbjct 966029 GTGGGTTCGAACCCCACACCTGACAAAACTTTTTTTTTTAATTTT 966073
Score = 132 bits (146), Expect = 5e-26
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||
Sbjct 987772 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 987713
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||||||||||||
Sbjct 987712 GTGGGTTCGAACCCCACACCTGACAAA 987686
>seq747
Length=89925
Score = 132 bits (146), Expect = 5e-26
Identities = 87/95 (92%), Gaps = 2/95 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||
Sbjct 83247 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 83188
Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357
|||||||||||||||||||||||||| || || ||
Sbjct 83187 GTGGGTTCGAACCCCACACCTGACAATTTCTTTTT 83153
>seq122
Length=217030
Score = 132 bits (146), Expect = 5e-26
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||
Sbjct 76514 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 76455
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||||||||||||
Sbjct 76454 GTGGGTTCGAACCCCACACCTGACAAA 76428
>seq4653
Length=3813
Score = 131 bits (144), Expect = 2e-25
Identities = 81/86 (94%), Gaps = 2/86 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||
Sbjct 359 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGCG 418
Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349
||||||||||||||||||||||||||
Sbjct 419 TGGGTTCGAACCCCACACCTGACAAA 444
>seq15
Length=547635
Score = 131 bits (144), Expect = 2e-25
Identities = 81/86 (94%), Gaps = 2/86 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||
Sbjct 357788 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGCG 357847
Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349
||||||||||||||||||||||||||
Sbjct 357848 TGGGTTCGAACCCCACACCTGACAAA 357873
>seq892
Length=179932
Score = 129 bits (142), Expect = 7e-25
Identities = 80/85 (94%), Gaps = 2/85 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| | ||||||
Sbjct 115915 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGC 115856
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
|||||||||||||||||||||||||
Sbjct 115855 GTGGGTTCGAACCCCACACCTGACA 115831
>seq350
Length=74739
Score = 129 bits (142), Expect = 7e-25
Identities = 80/85 (94%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||
Sbjct 68607 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAAACGGGAGC 68666
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
|||||||||||||||||||||||||
Sbjct 68667 GTGGGTTCGAACCCCACACCTGACA 68691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556811538701480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |