Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq241 100 2e-16
seq569 95.1 1e-14
>seq241
Length=949647
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245
||||||||||||||| || || | || || |||||||| || ||||| |||||
Sbjct 166505 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTC 166564
Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATC 111304
||| || ||| | || ||| ||||| || |||||||| | |||| | || |
Sbjct 166565 TGATACTATTGAAAACGTTAAAGCTAAAATCCAGGATAAAGAAGG-GATCCCACCAGACC 166623
Query 111305 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111364
||||| | | || | || || |||||| | |||||| ||| | | |||||||
Sbjct 166624 AACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATA 166683
Query 111365 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
| || ||||||||||| || || |||||||||||| | |||| |||||
Sbjct 166684 ACATCCAAAAAGAATCCACCCTCCATTTAGTGTTGAGATTGCGAGGTGG 166732
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245
||||||||| || || ||||| | || || |||||||| ||| | ||| ||||||
Sbjct 167645 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTC 167704
Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305
||| || ||| | || ||| ||||| ||||| ||||| | || |||||
Sbjct 167705 TGATACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167764
Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365
||| | | |||| || || ||||||||||||||| || | | ||||| ||
Sbjct 167765 ACAGCGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAA 167824
Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAA 111420
||| ||||| ||||| || || |||||||| | || || || ||||| ||| ||
Sbjct 167825 TATCCAAAAGGAATCCACTCTGCATTTAGTTCTTCGCCTACGTGGTGGAAATTAA 167879
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245
|||||| || ||||||||||| |||| || ||||| ||||| ||||| || ||
Sbjct 166049 AATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATC 166108
Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305
||| | ||| | || ||| ||||| || |||||||| |||| |||||
Sbjct 166109 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCA 166168
Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365
|||| | | || | ||| || |||||||| ||||| ||| | | ||||| ||
Sbjct 166169 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAA 166228
Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTG 111399
|| ||||||||||| || || ||||| ||||||
Sbjct 166229 CATCCAAAAAGAATCAACCCTCCATTTGGTGTTG 166262
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
|||||||||||||| || || | ||||| |||||||| ||| ||||| |||||
Sbjct 166734 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCT 166793
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| | ||| | || ||| || || || |||||||| |||| ||||||
Sbjct 166794 GATACAATTGAAAATGTTAAAGCTAAGATCCAGGATAAAGAAGGAATTCCTCCAGATCAA 166853
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||| | | || | ||| || |||||| | |||||| ||| | | || || ||
Sbjct 166854 CAACGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAAC 166913
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||||||||| || || |||||||| ||| | || | |||||
Sbjct 166914 ATCCAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGAGGTGG 166960
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245
||||||||| || || ||||| | || || |||||||| ||| | ||| ||||||
Sbjct 167417 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTC 167476
Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305
||| | ||| | || ||| ||||| ||||| ||||| | || |||||
Sbjct 167477 TGATACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167536
Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365
|||| | | || | || || |||||||| |||||| | ||| | | ||||| ||
Sbjct 167537 ACAACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 167596
Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTG 111399
|| ||||||||||| || || |||||||| |||
Sbjct 167597 CATTCAAAAAGAATCAACCCTCCATTTAGTATTG 167630
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245
|||||| || ||||||||||| |||| || ||||| ||||| ||||| || ||
Sbjct 167189 AATGCAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATC 167248
Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305
||| | ||| | || ||| ||||| ||||| ||||| | || |||||
Sbjct 167249 TGATACCATTGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167308
Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365
|||| | | || | || || |||||| | |||||| | ||| | | ||||| ||
Sbjct 167309 ACAACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAA 167368
Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTG 111399
|| ||||||||||| || || |||||||| |||
Sbjct 167369 CATCCAAAAAGAATCAACCCTCCATTTAGTATTG 167402
>seq569
Length=200630
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245
|||||||||||| || ||||| | ||||| |||||||| ||| | || ||||||
Sbjct 134392 AATGCAAATTTTCGTGAAAACCCTAACCGGTAAAACCATCACCCTCGAGGTTGAACCCTC 134451
Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305
|||| | | | | || || |||||| ||||| || || | || |||||
Sbjct 134452 CGATACCATCGAAAATGTCAAGGCAAAAATCCAAGACAAGGAGGGTATCCCACCAGATCA 134511
Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365
|||| | | || | || || |||||| |||||||| ||| | |||| || ||
Sbjct 134512 ACAACGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGACGCACTCTTTCCGACTACAA 134571
Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415
|| ||||| ||||| || || || || ||||||||||| || |||||||
Sbjct 134572 CATTCAAAAGGAATCGACGCTTCACTTGGTGTTGCGTCTTCGTGGTGGCA 134621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423003512403400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |