Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq241 176 4e-39 seq569 172 5e-38 seq412 141 8e-29 seq62 105 6e-18 seq1159 87.8 2e-12 >seq241 Length=949647 Score = 176 bits (194), Expect = 4e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || ||||| |||||||| |||| | ||||| ||| | || Sbjct 166278 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATCC 166337 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| || || ||||| ||||| || || ||||| |||||| Sbjct 166338 GACACCATTGAAAATGTTAAAGCTAAGATCCAAGATAAGGAAGGAATCCCACCAGATCAA 166397 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || ||||| || ||||| ||||| ||| ||||| | || ||||||||| Sbjct 166398 CAACGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTACAAC 166457 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||||||||| | |||||||| ||| ||||| | ||||| Sbjct 166458 ATCCAGAAAGAATCCACCCTTCATTTAGTATTGAGATTGAGAGGAGG 166504 Score = 172 bits (190), Expect = 5e-38 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || ||||| ||||| || ||||| |||| || ||||||||| | | Sbjct 167418 ATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTCT 167477 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| ||||| ||||||||||| || || ||||| |||||| Sbjct 167478 GATACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAA 167537 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || ||||| ||||| ||||| ||| || || | || ||||||||| Sbjct 167538 CAACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 167597 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431 |||||||||||||| ||| | |||||||| ||| Sbjct 167598 ATTCAAAAAGAATCAACCCTCCATTTAGTATTG 167630 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || ||||| |||||||| |||| | ||||| ||| | | Sbjct 166506 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTCT 166565 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | ||| ||||| || || || || || || ||||| || ||| Sbjct 166566 GATACTATTGAAAACGTTAAAGCTAAAATCCAGGATAAAGAAGGGATCCCACCAGACCAA 166625 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || ||||| ||||| | || ||| || || | || ||||| ||| Sbjct 166626 CAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATAAC 166685 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||||||||||||| | |||||||| ||| ||||||| || ||| Sbjct 166686 ATCCAAAAAGAATCCACCCTCCATTTAGTGTTGAGATTGCGAGGTGGT 166733 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || |||||||||||||| |||| | ||||| ||| | | Sbjct 166734 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCT 166793 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| || || || || || || || ||||| || |||||| Sbjct 166794 GATACAATTGAAAATGTTAAAGCTAAGATCCAGGATAAAGAAGGAATTCCTCCAGATCAA 166853 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| | || ||| || || | || || |||||| Sbjct 166854 CAACGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAAC 166913 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||||||||| || | |||||||| ||| ||||| | || || Sbjct 166914 ATCCAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGAGGTGG 166960 Score = 141 bits (156), Expect = 8e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| |||||||| || || ||||| | || | ||||| || | | Sbjct 167190 ATGCAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATCT 167249 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| ||||| ||||||||||| || || ||||| |||||| Sbjct 167250 GATACCATTGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAA 167309 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || ||||| ||||| | || ||| || || | || ||||||||| Sbjct 167310 CAACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAAC 167369 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431 || ||||||||||| ||| | |||||||| ||| Sbjct 167370 ATCCAAAAAGAATCAACCCTCCATTTAGTATTG 167402 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| || || || ||||| | ||| | ||||| || | | Sbjct 166050 ATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATCT 166109 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| ||||| || || || || || ||||| || |||||| Sbjct 166110 GATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCAA 166169 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || ||||| || ||||| ||||| || ||||| | || ||||||||| Sbjct 166170 CAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAAC 166229 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||||||||| ||| | ||||| || ||| ||||| | ||||| Sbjct 166230 ATCCAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGAGGAGG 166276 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || ||||| ||||| || ||||| |||| | ||||||||| | | Sbjct 167646 ATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTCT 167705 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| ||||||||||| || || ||||| |||||| Sbjct 167706 GATACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAA 167765 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || || ||||| || || ||| || ||| | || |||||||| Sbjct 167766 CAGCGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAAT 167825 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || ||||| |||||||| | ||||||||| Sbjct 167826 ATCCAAAAGGAATCCACTCTGCATTTAGTT 167855 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| |||||||| || || ||||| | ||| | ||||| || | | Sbjct 166962 ATGCAGATTTTTGTCAAAACTTTGACTGGAAAAACTATTACTTTAGAAGTTGAGCCATCT 167021 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| ||||| || || ||||| || ||||| || |||||| Sbjct 167022 GATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCAA 167081 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || ||||| ||||| | || ||| ||||| | || |||||||| Sbjct 167082 CAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGGCGCACTCTTTCTGATTACAAT 167141 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| ||||| || | || || || ||| ||||| | || || Sbjct 167142 ATCCAAAAGGAATCTACTCTCCACTTGGTATTGAGATTGAGAGGTGG 167188 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| ||||| || ||||| || || |||||||| |||| | || || || | Sbjct 165592 AGATGCAGATTTTCGTGAAAACCTTGACTGGTAAAACCATCACGTTAGAGGTCGAGCCAT 165651 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | || || | || ||||| || ||||| ||||| || ||||| || | Sbjct 165652 CTGACACTATTGAAAATGTGAAGGCGAAAATCCAGGACAAAGAGGGGATCCCACCAGACC 165711 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 ||||||| | || |||||||| ||||| ||||| ||| || ||| | |||||||||| Sbjct 165712 AACAACGGTTGATCTTTGCCGGAAAACAATTAGAAGATGGACGTACCCTTTCCGATTACA 165771 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 | || ||||| ||||| || | || || || ||| ||||| | || || Sbjct 165772 ATATCCAAAAGGAATCAACTCTCCACTTGGTATTGAGATTGAGGGGTGG 165820 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||||| || || || || | || | ||||| || | || Sbjct 165822 ATGCAGATCTTCGTCAAAACTTTGACTGGAAAGACTATTACATTGGAAGTTGAGCCATCC 165881 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| || |||||||| ||||| || || ||||| |||||| Sbjct 165882 GACACCATAGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATCCCACCAGATCAA 165941 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| || || ||| || || | || |||||||| Sbjct 165942 CAACGTTTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACTCTTTCTGATTACAAT 166001 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| ||||| || | ||||| || ||| ||||| | || || Sbjct 166002 ATCCAAAAGGAATCAACTCTTCATTTGGTATTGAGATTGAGAGGTGG 166048 >seq569 Length=200630 Score = 172 bits (190), Expect = 5e-38 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| ||||||||||||| |||| || || || ||| || || Sbjct 134393 ATGCAAATTTTCGTGAAAACCCTAACCGGTAAAACCATCACCCTCGAGGTTGAACCCTCC 134452 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || |||| |||||| ||||||||||||||||| ||||| |||||| Sbjct 134453 GATACCATCGAAAATGTCAAGGCAAAAATCCAAGACAAGGAGGGTATCCCACCAGATCAA 134512 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || ||||| | || ||| ||||| | ||||| |||||| Sbjct 134513 CAACGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGACGCACTCTTTCCGACTACAAC 134572 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 |||||||| ||||| || | || || || ||||| Sbjct 134573 ATTCAAAAGGAATCGACGCTTCACTTGGTGTTGCG 134607 >seq412 Length=275653 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || ||||||||||||||||| || || || | |||||||| || || | Sbjct 82785 AAATATGCAGATCTTTGTTAAAACTTTAACTGGCAAGACCATAACTCTTGAGGTCGAGCC 82844 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 |||||||| | || || |||| || || |||||||| ||||| || ||||| || Sbjct 82845 TTCCGATACCATCGAAAATGTCAAGGCTAAGATCCAAGACAAAGAGGGAATCCCACCGGA 82904 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 |||||| ||| | || || || || ||||| | || ||| ||||| | || ||||| Sbjct 82905 TCAACAGCGTTTAATTTTCGCGGGAAAACAACTCGAAGATGGGCGCACTCTTTCTGATTA 82964 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| |||||||| || | |||||||| | ||||||| || || Sbjct 82965 TAATATTCAGAAAGAATCAACGTTGCATTTAGTCCTAAGATTGCGTGGTGG 83015 >seq62 Length=648032 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 22225 ATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACC 22284 || || || ||||||||||| || ||| |||| | | ||||||| | | |||||| Sbjct 445319 ATCTTCGTAAAAACTTTAACTGGAGAAATCATCACCTTAGGAGTGGAACCTTCTGATACC 445378 Query 22285 GTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGT 22344 | || || | ||| ||||| ||||| | ||| || || ||||| ||| |||||||| Sbjct 445379 ATTGAAAATGTTAAAGCTAAAATCCAAGATACGGAAGGAATCCCACCAGATGAACAACGT 445438 Query 22345 CTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAA 22404 | || || | || ||||| | || ||| || || | || ||||||||||||||| Sbjct 445439 TTAATCTTCTCTGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACATTCAA 445498 Query 22405 AAAGAATCCACCATACATTTAGT 22427 |||||||| ||| | || || || Sbjct 445499 AAAGAATCAACCCTCCAGTTGGT 445521 Score = 102 bits (112), Expect = 7e-17 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || |||| |||||| || ||||| |||| | ||||||||| | || Sbjct 445529 ATGCAAATCTTCGTAAAAAGTTTAACTGGAAAAACCATCACCTTGGAAGTGGAACCTACT 445588 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | | || | ||| || |||||||||||||| | |||||||| |||||| Sbjct 445589 GATACTATTGGAAATGTAAAAGTTAAGATTCAAGACAAGGAAAGGATTCCACCGGATCAA 445648 Query 22339 CAACGTCTTATATTTGCC--GGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 || ||| ||| |||| || | ||| | || || ||| || ||| | || ||||||| Sbjct 445649 CAGCGT-TTA-ATTTTCCATCGTAAAGAATTGGAAGATGGACGTACCCTTTCAGATTACA 445706 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTT 22428 | || | || |||| || | |||||||| Sbjct 445707 ATATCTATAAGAAATCTACTCTGTATTTAGTT 445738 >seq1159 Length=103958 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 117081 GTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTATCAAGACCAAAGGT 117140 || || || ||||||||||| || |||||||| || || |||| | || | ||| Sbjct 50253 GTTGAGGGTATTTTCTTTTCGGGAAGTTTTGCAGCTATTTTTTGGTTGAAAAAGCGGGGT 50194 Query 117141 CTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACGAAGGTTTACACACC 117200 ||||||| ||| |||||||| || |||||||| ||||| || ||||||||||| | Sbjct 50193 TTAATGCCCGGTTTAACGTTTTCTAATGAATTAATTTCGCGCGATGAAGGTTTACATTAC 50134 Query 117201 GATTTTGCGTG 117211 || ||||| || Sbjct 50133 GAATTTGCTTG 50123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419691798066505