Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq4 93.3 9e-14
seq534 91.5 3e-13
seq241 91.5 3e-13
seq17 91.5 3e-13
seq1251 89.7 1e-12
seq935 89.7 1e-12
seq414 89.7 1e-12
seq139 89.7 1e-12
>seq4
Length=1569984
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109
|| ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||
Sbjct 879623 CAAGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCG 879682
Query 142110 ACCCCCGCCAGAGA 142123
| ||||||||| ||
Sbjct 879683 ATCCCCGCCAGGGA 879696
>seq534
Length=292624
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 54562 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 54503
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 54502 CCCCACGTTGGGC 54490
>seq241
Length=949647
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 293919 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 293860
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 293859 CCCCACGTTGGGC 293847
>seq17
Length=472010
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 427871 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 427812
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 427811 CCCCACGTTGGGC 427799
>seq1251
Length=34721
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 7773 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 7714
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 7713 CCCACGTTGGGC 7702
>seq935
Length=99032
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 13842 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 13783
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 13782 CCCACGTTGGGC 13771
>seq414
Length=159633
Score = 89.7 bits (98), Expect = 1e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 10745 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 10686
Query 142113 CCCGCCAGAGACGC 142126
||| |||| || ||
Sbjct 10685 CCCACCAGGGATGC 10672
Score = 89.7 bits (98), Expect = 1e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 22779 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 22838
Query 142113 CCCGCCAGAGACGC 142126
||| |||| || ||
Sbjct 22839 CCCACCAGGGATGC 22852
>seq139
Length=555946
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 244555 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 244496
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 244495 CCCACGTTGGGC 244484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027743601861757
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |