Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq241 172 1e-37
seq569 168 1e-36
seq62 104 4e-17
>seq241
Length=949647
Score = 172 bits (190), Expect = 1e-37
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
||||||| | | | |||||| || || || ||||| ||||| |||||||| ||||| |
Sbjct 166506 TTCCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAG 166447
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | |||||||||||| || || || || || || | || |||||| || ||||
Sbjct 166446 AAAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTG 166387
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| || |||||||| ||||| ||||| || || || || |||||||| | || ||| |
Sbjct 166386 GGATTCCTTCCTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGA 166327
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||||||| ||||||||||| || || | |||||| || || || ||||||
Sbjct 166326 CTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166277
Score = 152 bits (168), Expect = 9e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
|||||| || || || || || |||||||||||||| ||||| || || || | |||||
Sbjct 167402 CAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATC 167343
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| | || || |||||||| || | | |||||| || ||||| || |||||||||||
Sbjct 167342 TTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTC 167283
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || || || || ||| ||||| || | || || |||||||| || || ||
Sbjct 167282 TTGGATTTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGTAATAGT 167223
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||||| || | || ||||| || |||||||||
Sbjct 167222 TTTTCCAGTCAAAGTTTTGACAAAGATCTGCATT 167189
Score = 152 bits (168), Expect = 9e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
|||||| || || || || || |||||||| ||||| ||||| || || || | |||||
Sbjct 167630 CAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATC 167571
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| || || |||||||| || | | |||||| || ||||| || |||||||||||
Sbjct 167570 TTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTC 167511
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || || || || || ||||| || | | ||| ||||| | |||||||||
Sbjct 167510 TTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGATGGT 167451
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||||| || | || || ||||| || ||||||
Sbjct 167450 TTTTCCAGTTAATGTTTTTACGAAGATTTGCATT 167417
Score = 150 bits (166), Expect = 3e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
|||||||||||| || || || || |||||||| || |||||||| || || | |||||
Sbjct 165806 CAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAAAGGGTACGTCCATC 165747
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| || || ||||| || || | | ||||||||| ||||| || || || |||||
Sbjct 165746 TTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGGATCCCCTCTTTGTC 165687
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| || || ||||| || || || ||||| | || || || || || ||||||||
Sbjct 165686 CTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGACCTCTAACGTGATGGT 165627
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | ||| || ||||| ||||||||
Sbjct 165626 TTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594
Score = 149 bits (164), Expect = 1e-30
Identities = 174/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287
||||||||| || || ||||| | || || || || ||||| || |||||||| || ||
Sbjct 167879 TTAATTTCCACCACGTAGGCGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTA 167820
Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347
||| || || || | |||||||| || || || || ||||| || | | ||||| ||
Sbjct 167819 ATCTGAAAGGGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATC 167760
Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407
||||| || |||||||||||||| || || || || || || || || || | |
Sbjct 167759 TGGTGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGG 167700
Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| ||||| ||||||||||||||||| || | || || ||||| || ||||||
Sbjct 167699 TTCCACTTCTAAGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCATT 167645
Score = 147 bits (162), Expect = 4e-30
Identities = 161/214 (75%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||||||||| || || || || || |||||||| || ||||| || || || | |||||
Sbjct 166034 CAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGTACGTCCATC 165975
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | | |||||| || ||||| || |||||||| ||
Sbjct 165974 TTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATC 165915
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| || || || || |||||||| | || || |||||||| || || ||
Sbjct 165914 TTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAACTTCCAATGTAATAGT 165855
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||||| || | || |||||||| |||||||||
Sbjct 165854 CTTTCCAGTCAAAGTTTTGACGAAGATCTGCATT 165821
Score = 147 bits (162), Expect = 4e-30
Identities = 161/214 (75%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || || || ||||| |||||||||||||||||||| || || || | |||||
Sbjct 166718 CAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAAAGAGTACGTCCATC 166659
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| | || || |||||||| || | | ||||||||| ||||| || ||||| || ||
Sbjct 166658 TTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGGATCCCTTCTTTATC 166599
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| || || || || ||| || || || || | | ||| |||||||| ||||||||
Sbjct 166598 CTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACTTCCAATGTGATGGT 166539
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| || || | |||||| || || || ||||||
Sbjct 166538 TTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166505
Score = 138 bits (152), Expect = 2e-27
Identities = 159/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
|||||||||||| || || || || |||||||| || ||||| || || || | ||||||
Sbjct 167174 CAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAAAGAGTGCGCCCATC 167115
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| | || || |||||||| || | | |||||| || || ||||| |||||||| ||
Sbjct 167114 TTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCCTTATC 167055
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| || || || || || || ||||| || | || || ||||| || || || ||
Sbjct 167054 CTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCTAAAGTAATAGT 166995
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||||| || | || ||||| || |||||||||
Sbjct 166994 TTTTCCAGTCAAAGTTTTGACAAAAATCTGCATT 166961
Score = 136 bits (150), Expect = 7e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
||||||| | | | ||| ||||| || || || || |||||||||||||| ||||| |
Sbjct 166278 TTCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAG 166219
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | || |||||||| || || || || || || | || |||||| || || |
Sbjct 166218 AAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAG 166159
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
|||| ||||| || || || || || || || || || ||||| || | || || |
Sbjct 166158 GAATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAA 166099
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||||||| || || |||||||| || | || ||||| || |||||||||
Sbjct 166098 CTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCATT 166049
Score = 132 bits (146), Expect = 9e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
|||||| || || || || || |||||||||||||| || || || || || | ||||||
Sbjct 166946 CAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACGCCCATC 166887
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| | || || || || || || | | |||||| || || ||||| ||||| || ||
Sbjct 166886 TTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCTTTATC 166827
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| || || || || || || || | | ||| |||||||||||||||||
Sbjct 166826 CTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAACTTCCAAGGTGATGGT 166767
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | |||||| || || || |||||
Sbjct 166766 TTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734
>seq569
Length=200630
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| ||||| |||||||| ||||| || || ||||| ||||| || |||||
Sbjct 134619 CCACCACGAAGACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAA 134560
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | || || || ||||| || | | |||||| || |||||
Sbjct 134559 AGAGTGCGTCCATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGG 134500
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| || ||||||||||| |||||||| || | | ||| ||
Sbjct 134499 ATACCCTCCTTGTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACC 134440
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| | |||||||||||| || || ||||| || ||||| || ||||||
Sbjct 134439 TCGAGGGTGATGGTTTTACCGGTTAGGGTTTTCACGAAAATTTGCATT 134392
>seq62
Length=648032
Score = 104 bits (114), Expect = 4e-17
Identities = 164/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287
||| ||||| || || ||||| | || || | || || || | || | ||| || ||
Sbjct 445762 TTATTTTCCACCACGTAGGCGAATAACTAAATACAGAGTAGATTTCTTATAGATATTGTA 445703
Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347
||| || || || | |||||||| || | || | ||| || | | ||||| ||
Sbjct 445702 ATCTGAAAGGGTACGTCCATCTTCCAATTCTTTACGATGGAAAATTAAACGCTGTTGATC 445643
Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407
|||||||| | |||||||||||||||||| | || || | || || || | |
Sbjct 445642 CGGTGGAATCCTTTCCTTGTCTTGAATCTTAACTTTTACATTTCCAATAGTATCAGTAGG 445583
Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| ||||||||||||||||||||||| || | | || ||||| || ||||||
Sbjct 445582 TTCCACTTCCAAGGTGATGGTTTTTCCAGTTAAACTTTTTACGAAGATTTGCATT 445528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921540870978440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |