Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq241 141 8e-29 seq569 132 4e-26 seq256 120 3e-22 seq62 96.9 3e-15 >seq241 Length=949647 Score = 141 bits (156), Expect = 8e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 |||||| |||||||| | || ||||||||||| |||||||| || | |||||| Sbjct 166949 TCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACGCCC 166890 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||||||||||||||||||||| |||| | ||| ||||| || |||||||| |||||||| Sbjct 166889 ATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCTTT 166830 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || ||||| ||| | | ||||| || || | | ||| || |||| ||| | Sbjct 166829 ATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAACTTCCAAGGTGAT 166770 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| ||||| | || || |||||||| ||||| Sbjct 166769 GGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734 Score = 140 bits (154), Expect = 3e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || | |||||| |||||||| | || ||||||||||| ||||| ||||| Sbjct 166735 ATACCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCC 166676 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| |||||||||||||||||| ||| |||| | ||| |||||||| || Sbjct 166675 GAAAGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGT 166616 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || || |||||||| || || ||| | |||| | | ||||| || || | | ||| Sbjct 166615 GGGATCCCTTCTTTATCCTGGAT-TTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTC 166557 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| |||| || | ||||| || || | || || |||||||| ||||| Sbjct 166556 GACTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506 Score = 140 bits (154), Expect = 3e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 114168 CTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAA 114227 ||||| |||||||| | || ||||||||||| ||||||||||| | ||||||| | Sbjct 167404 CTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCA 167345 Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 ||||||||||||||||| ||| |||| | ||| ||||| || || || || ||||| ||| Sbjct 167344 TCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTG 167285 Query 114288 TCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || || ||| | |||| | | |||| ||| || | | || || |||| || | Sbjct 167284 TCTTGGAT-TTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGTAAT 167226 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || |||| |||||| ||||| |||||||| Sbjct 167225 AGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190 Score = 131 bits (144), Expect = 1e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 114168 CTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAA 114227 ||||| |||||||| | || ||||||||||||||||||||||| | ||||||| | Sbjct 167632 CTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCA 167573 Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 ||||| | ||||||||| ||| |||| | ||| ||||| || || || || ||||| ||| Sbjct 167572 TCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTG 167513 Query 114288 TCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || || ||| | |||| | | ||||| ||| || | | ||| || || | ||| | Sbjct 167512 TCTTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGAT 167454 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || || | |||||||| || || ||||| Sbjct 167453 GGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 |||||| || || || | |||||||| ||||| || |||||||| | ||| || Sbjct 167177 TCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAAAGAGTGCGCCC 167118 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||||||||||||||| ||| |||| | ||| ||||| || |||||||| ||||| || Sbjct 167117 ATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCCTT 167058 Query 114287 GTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCA 114345 || || ||| | |||| | | ||||| ||| || | | || || || | || | Sbjct 167057 ATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCTAAAGTAA 166999 Query 114346 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || |||| |||||| |||||||||||||| Sbjct 166998 TAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 |||||| |||||||| | || |||||||| || ||||||||||| | ||| || Sbjct 166493 TCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGCCC 166434 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| | |||||||||||| |||| | || ||||| || || || || ||||| || Sbjct 166433 ATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGGATTCCTTCCTT 166374 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || ||||| ||| | | ||||| |||||||| | |||||| |||| || | Sbjct 166373 ATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGACTTCCAATGTGAT 166314 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || || | || || |||||||| ||||| Sbjct 166313 GGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166278 Score = 118 bits (130), Expect = 9e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 |||||| || ||||| | || ||||||||||| ||||||||||| | ||| || Sbjct 166265 TCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGTCC 166206 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||||| | |||||||||||| |||| | || ||||| || |||||||| |||||||| Sbjct 166205 GTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGAATTCCTTCTTT 166146 Query 114287 GTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCA 114345 || || ||| | |||| | | ||||| ||| || | | || || |||| || | Sbjct 166145 ATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCCAAAGTAA 166087 Query 114346 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || |||| ||||| ||||| |||||||| Sbjct 166086 TAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || |||||||| | | ||||||||| | || ||||| ||||| || |||||||| Sbjct 167872 CCACCACGTAGGCGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAA 167813 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||||| |||||| | ||||||||||||| | || | ||||||||| || || || Sbjct 167812 AGGGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGG 167753 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGAC 114334 || ||||| ||||| || ||| | |||| | | ||||| || || | | ||| || Sbjct 167752 ATTCCTTCCTTGTCTTGGAT-TTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCAC 167694 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | ||||| || || | |||||||| || || ||||| Sbjct 167693 TTCTAAGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167646 Score = 93.3 bits (102), Expect = 4e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 |||||| || || || | || ||||| ||||| || ||||||||| | ||||| Sbjct 165809 TCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAAAGGGTACGTCC 165750 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| | |||||| || || |||| | || |||||||| || || || || ||||| Sbjct 165749 ATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGGATCCCCTCTTT 165690 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| || || || | | ||||| ||||| | | ||||| || | || | Sbjct 165689 GTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGACCTCTAACGTGAT 165630 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAAT 114390 ||||| || |||| ||||| || ||||||||||| ||||| Sbjct 165629 GGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCATCTGTTAAT 165586 >seq569 Length=200630 Score = 132 bits (146), Expect = 4e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | ||| || || || | ||| ||||| |||||||||||||| ||| Sbjct 134622 ATGCCACCACGAAGACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCG 134563 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||| ||||||||||||||| |||| | ||| ||||| || || Sbjct 134562 GAAAGAGTGCGTCCATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGT 134503 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| || ||| || | | ||| | ||| |||| || ||| Sbjct 134502 GGGATACCCTCCTTGTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCA 134443 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 114385 || || | ||| | ||||| ||||| || ||||| || ||||| ||||| || Sbjct 134442 ACCTCGAGGGTGATGGTTTTACCGGTTAGGGTTTTCACGAAAATTTGCATTGC 134390 >seq256 Length=136933 Score = 120 bits (132), Expect = 3e-22 Identities = 216/313 (69%), Gaps = 7/313 (2%) Strand=Plus/Minus Query 43672 GCTCCCGAATTACCTGTCGTTTTACTGAGAACGTGACCGCCCACACCCAAATCGTCACGA 43731 ||||| | ||||||||| ||||| || || |||| || |||| || ||||| ||| || Sbjct 66946 GCTCCAGCATTACCTGTTGTTTTGCTAAGTTCGTGTCCCCCCATTCCTAAATCATCAGGA 66887 Query 43732 TCCGCATGAATCACTAGACTGCGACCTATAATACTATTTTCGCCGAAAAGGGTCATTACG 43791 || ||||||| ||| | ||| || || ||||| |||| | || || | | || ||| Sbjct 66886 TCGGCATGAACCACCAAACTTCGTCCGATAATGTTATTAGCCCCAAATAACGAAATCACG 66827 Query 43792 TTGTCGATCTTGTCTATTTCAGTTAAACTGTTTGACTTTTTCGCTTCAATGTTACCTAAA 43851 || || || | | || || | | | || | | ||||| || ||||||||| Sbjct 66826 TTATCAATAATATTTACTTTGGCCATTCCA---GAATCATCGGCTTCGATATTACCTAAA 66770 Query 43852 TCGCCGACGTGACGCTCT--ATCGAATTGGGTGCGCCATGATTGCGACCAAAAGGATTGA 43909 || ||||| ||||| ||| | || | ||| | ||||| | ||| |||||| || Sbjct 66769 TCACCGACATGACGGTCTGAAACGTCTGGGG--CTCCATGCTCTTTTCCATAAGGATCGA 66712 Query 43910 AATGTTCGCCGGCGGACGTACATCCGTTACTGGTGTCGCCGAATTCGTGCACGTGAAATC 43969 |||| | || ||||| | || || || || | |||||||||| || ||||| || | Sbjct 66711 AATGAGCCCCAGCGGAGATGCAACCATTCGTGTTATCGCCGAATTGATGAACGTGGAAAC 66652 Query 43970 CATGAAGACCTTT 43982 | ||||||||||| Sbjct 66651 CGTGAAGACCTTT 66639 >seq62 Length=648032 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct 445509 GTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGTTTACCA 445450 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 | | |||| | ||| |||| || || || || ||||| | || || ||| | ||| Sbjct 445449 GAGAAGATTAAACGTTGTTCATCTGGTGGGATTCCTTCCGTATCTTGGAT-TTTAGCTTT 445391 Query 114306 AGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | | ||||| ||| || | | ||| || | | ||| | ||| || || | ||| Sbjct 445390 AACATTTTCAATGGTATCAGAAGGTTCCACTCCTAAGGTGATGATTTCTCCAGTTAAAGT 445331 Query 114365 TTTTACAAAAAT 114376 |||||| || || Sbjct 445330 TTTTACGAAGAT 445319 Score = 91.5 bits (100), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 3/106 (3%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct 445311 GTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGTTTACCA 445252 Query 114246 GCGTAGATGAGAC---GCTGTTGGTCCGGAGGAATGCCTTCTTTGT 114288 ||| |||| | || ||||| || || || || ||||| |||| Sbjct 445251 GCGAAGATTAAACTTGTTTGTTGATCTGGTGGGATTCCTTCCTTGT 445206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420098163014124