Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq241 152 1e-31
seq62 87.8 4e-12
>seq241
Length=949647
Score = 152 bits (168), Expect = 1e-31
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| | | ||| | ||| | ||||| || ||| ||||||||||| || || |
Sbjct 166049 TCCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGA 165990
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || ||||| ||||| ||||||||||| || ||||||| ||| |||||| |||
Sbjct 165989 AAGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGG 165930
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
||||||||| ||||| || || || ||||| || |||||||| | ||| | || ||
Sbjct 165929 GATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAAC 165870
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||| | || || ||||| || |||| ||| |||||||| |||||||||
Sbjct 165869 TTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCATT 165821
Score = 149 bits (164), Expect = 1e-30
Identities = 172/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302
|| |||||| || || | ||| || | ||| | ||| ||| ||||||||||| || ||
Sbjct 167876 ATTTCCACCACGTAGGCGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATC 167817
Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362
| || || ||||| ||||| |||||||| || ||||| |||| ||||||||||
Sbjct 167816 TGAAAGGGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGG 167757
Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
|||||||||||| || || |||||||| ||||| || ||||| |||| ||| | |||
Sbjct 167756 TGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTC 167697
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| | ||||| || || || || | || || ||||| || ||||||
Sbjct 167696 CACTTCTAAGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCATT 167645
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | ||| | || | ||| | ||| |||||||||||| ||||| || |
Sbjct 166732 CCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAA 166673
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||| ||||| | |||||| || |||||||| | ||| ||||| ||||
Sbjct 166672 AGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGG 166613
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| |||||||||||||||||||| ||||| |||||||| |||| ||| | ||| |||
Sbjct 166612 ATCCCTTCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACT 166553
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| | ||||| || || || || | ||||| || || || ||||||
Sbjct 166552 TCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166505
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||||||||| || |||| || || ||||| ||||||||||||||||| || ||
Sbjct 165785 TTCCTTTTGGATATTGTAATCGGAAAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAA 165726
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| || ||||| |||||| || ||||| |||||||||||||| ||||| ||
Sbjct 165725 GATCAACCGTTGTTGGTCTGGTGGGATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATT 165666
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| |||| || | || || || | |||||| || || || |||| || || ||
Sbjct 165665 TTCAATAGTGTCAGATGGCTCGACCTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCAC 165606
Query 288462 GAATATCTGCATTATGTTATTCTAA 288486
||| ||||||| | ||||| || ||
Sbjct 165605 GAAAATCTGCA-TCTGTTAATCGAA 165582
Score = 138 bits (152), Expect = 3e-27
Identities = 149/196 (76%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||| || || || | || ||||||||||||||||||||||| || || ||
Sbjct 166241 TTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAA 166182
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||| | || |||||| ||||| ||||||||||||||||||||||| ||||| ||
Sbjct 166181 GATTAATCGTTGTTGA---TCTGGAGGAATTCCTTCTTTATCCTGGATTTTAGCTTTAAC 166125
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||||| || | ||| | || ||||| | || || || || || |||| || ||
Sbjct 166124 ATTTTCAATGGTATCAGATGGCTCAACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTT 166065
Query 288459 GACGAATATCTGCATT 288474
||| || |||||||||
Sbjct 166064 GACAAAGATCTGCATT 166049
Score = 129 bits (142), Expect = 1e-24
Identities = 147/196 (75%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||||||||| || || | || ||||| || ||||| | |||||| || |||||
Sbjct 167153 TTCCTTTTGGATATTGTAATCAGAAAGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAA 167094
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||| | ||| |||||| ||||| |||||||| |||||||||||||| ||||| ||
Sbjct 167093 GATTAAACGTTGTTGA---TCTGGAGGAATTCCTTCCTTATCCTGGATTTTAGCTTTAAC 167037
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||||| || | ||| | || ||||| | || || || || || |||| ||| ||
Sbjct 167036 ATTTTCAATGGTATCAGATGGCTCAACTTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTT 166977
Query 288459 GACGAATATCTGCATT 288474
||| || |||||||||
Sbjct 166976 GACAAAAATCTGCATT 166961
Score = 127 bits (140), Expect = 5e-24
Identities = 144/193 (75%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||||||| || || || || | || || || || |||||||||||||| || |||||
Sbjct 167609 TTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAA 167550
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| | ||| |||||| |||||||||||| || || |||||||| ||||| || ||
Sbjct 167549 GATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATT 167490
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | ||| | ||| ||||| || ||||| || || || || | || || ||
Sbjct 167489 TTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTAC 167430
Query 288462 GAATATCTGCATT 288474
||| || ||||||
Sbjct 167429 GAAGATTTGCATT 167417
Score = 125 bits (138), Expect = 2e-23
Identities = 158/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317
||| | ||| | ||||| ||| |||||| ||||| || || || | || ||||| ||
Sbjct 166493 TCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGCCC 166434
Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377
|||||||||||||| || || ||||| | || |||||| |||||||||||| ||
Sbjct 166433 ATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGGATTCCTTCCTT 166374
Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437
||| ||||| || ||||| || ||||| || | ||| | ||| ||||| | |||||
Sbjct 166373 ATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGACTTCCAATGTGAT 166314
Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || || | ||||| || || || ||||||
Sbjct 166313 GGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166277
Score = 125 bits (138), Expect = 2e-23
Identities = 167/231 (72%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| | | ||| | ||| | ||| | || |||||||||||| || ||||| |
Sbjct 166961 TCCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGA 166902
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || || || ||||| | |||||| || || ||||| | ||| |||||| |||||
Sbjct 166901 AAGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGA---TCTGG 166845
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
|||||||||||||||||||| || ||||| || ||||| || | ||| | |||
Sbjct 166844 AGGAATTCCTTCTTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTC 166785
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | ||||| || || ||||| | ||||| || || || |||||
Sbjct 166784 AACTTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734
Score = 123 bits (136), Expect = 6e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||| || || || | || || || || ||||| | |||||| || |||||
Sbjct 167381 TTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGTTTACCGGCGAA 167322
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| ||| |||||| |||||||||||| || || |||||||| ||||| || ||
Sbjct 167321 GATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATT 167262
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||| | || ||||| | || || || || || |||| ||| |||||
Sbjct 167261 CTCAATGGTATCAGATGGCTCAACTTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGAC 167202
Query 288462 GAATATCTGCATT 288474
|| |||||||||
Sbjct 167201 AAAGATCTGCATT 167189
>seq62
Length=648032
Score = 87.8 bits (96), Expect = 4e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||||||| || || || || | || || || || ||||| | |||||| || | |||
Sbjct 445504 TTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGTTTACCAGAGAA 445445
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| | ||| |||| | |||||||||||| |||| |||||||| ||||| || ||
Sbjct 445444 GATTAAACGTTGTTCATCTGGTGGGATTCCTTCCGTATCTTGGATTTTAGCTTTAACATT 445385
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | ||| | ||| ||| | | ||||| | | || || | ||| || ||
Sbjct 445384 TTCAATGGTATCAGAAGGTTCCACTCCTAAGGTGATGATTTCTCCAGTTAAAGTTTTTAC 445325
Query 288462 GAATAT 288467
||| ||
Sbjct 445324 GAAGAT 445319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179547435943206
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