Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq241 152 1e-31 seq62 87.8 4e-12 >seq241 Length=949647 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | | ||| | ||| | ||||| || ||| ||||||||||| || || | Sbjct 166049 TCCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGA 165990 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || ||||| ||||| ||||||||||| || ||||||| ||| |||||| ||| Sbjct 165989 AAGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGG 165930 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||| ||||| || || || ||||| || |||||||| | ||| | || || Sbjct 165929 GATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAAC 165870 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| | || || ||||| || |||| ||| |||||||| ||||||||| Sbjct 165869 TTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCATT 165821 Score = 149 bits (164), Expect = 1e-30 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302 || |||||| || || | ||| || | ||| | ||| ||| ||||||||||| || || Sbjct 167876 ATTTCCACCACGTAGGCGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATC 167817 Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362 | || || ||||| ||||| |||||||| || ||||| |||| |||||||||| Sbjct 167816 TGAAAGGGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGG 167757 Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||||||||||| || || |||||||| ||||| || ||||| |||| ||| | ||| Sbjct 167756 TGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTC 167697 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | ||||| || || || || | || || ||||| || |||||| Sbjct 167696 CACTTCTAAGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCATT 167645 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | ||| | || | ||| | ||| |||||||||||| ||||| || | Sbjct 166732 CCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAA 166673 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||| ||||| | |||||| || |||||||| | ||| ||||| |||| Sbjct 166672 AGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGG 166613 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||||||||||||||| ||||| |||||||| |||| ||| | ||| ||| Sbjct 166612 ATCCCTTCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACT 166553 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | ||||| || || || || | ||||| || || || |||||| Sbjct 166552 TCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166505 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||| || |||| || || ||||| ||||||||||||||||| || || Sbjct 165785 TTCCTTTTGGATATTGTAATCGGAAAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAA 165726 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| || ||||| |||||| || ||||| |||||||||||||| ||||| || Sbjct 165725 GATCAACCGTTGTTGGTCTGGTGGGATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATT 165666 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| |||| || | || || || | |||||| || || || |||| || || || Sbjct 165665 TTCAATAGTGTCAGATGGCTCGACCTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCAC 165606 Query 288462 GAATATCTGCATTATGTTATTCTAA 288486 ||| ||||||| | ||||| || || Sbjct 165605 GAAAATCTGCA-TCTGTTAATCGAA 165582 Score = 138 bits (152), Expect = 3e-27 Identities = 149/196 (76%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || || || | || ||||||||||||||||||||||| || || || Sbjct 166241 TTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAA 166182 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| | || |||||| ||||| ||||||||||||||||||||||| ||||| || Sbjct 166181 GATTAATCGTTGTTGA---TCTGGAGGAATTCCTTCTTTATCCTGGATTTTAGCTTTAAC 166125 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | ||| | || ||||| | || || || || || |||| || || Sbjct 166124 ATTTTCAATGGTATCAGATGGCTCAACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTT 166065 Query 288459 GACGAATATCTGCATT 288474 ||| || ||||||||| Sbjct 166064 GACAAAGATCTGCATT 166049 Score = 129 bits (142), Expect = 1e-24 Identities = 147/196 (75%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||| || || | || ||||| || ||||| | |||||| || ||||| Sbjct 167153 TTCCTTTTGGATATTGTAATCAGAAAGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAA 167094 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| | ||| |||||| ||||| |||||||| |||||||||||||| ||||| || Sbjct 167093 GATTAAACGTTGTTGA---TCTGGAGGAATTCCTTCCTTATCCTGGATTTTAGCTTTAAC 167037 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | ||| | || ||||| | || || || || || |||| ||| || Sbjct 167036 ATTTTCAATGGTATCAGATGGCTCAACTTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTT 166977 Query 288459 GACGAATATCTGCATT 288474 ||| || ||||||||| Sbjct 166976 GACAAAAATCTGCATT 166961 Score = 127 bits (140), Expect = 5e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || || || | || || || || |||||||||||||| || ||||| Sbjct 167609 TTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAA 167550 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | ||| |||||| |||||||||||| || || |||||||| ||||| || || Sbjct 167549 GATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATT 167490 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | ||| | ||| ||||| || ||||| || || || || | || || || Sbjct 167489 TTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTAC 167430 Query 288462 GAATATCTGCATT 288474 ||| || |||||| Sbjct 167429 GAAGATTTGCATT 167417 Score = 125 bits (138), Expect = 2e-23 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 ||| | ||| | ||||| ||| |||||| ||||| || || || | || ||||| || Sbjct 166493 TCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGCCC 166434 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 |||||||||||||| || || ||||| | || |||||| |||||||||||| || Sbjct 166433 ATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGGATTCCTTCCTT 166374 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 ||| ||||| || ||||| || ||||| || | ||| | ||| ||||| | ||||| Sbjct 166373 ATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGACTTCCAATGTGAT 166314 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || | ||||| || || || |||||| Sbjct 166313 GGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166277 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | | ||| | ||| | ||| | || |||||||||||| || ||||| | Sbjct 166961 TCCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGA 166902 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| | |||||| || || ||||| | ||| |||||| ||||| Sbjct 166901 AAGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGA---TCTGG 166845 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||||||||||||||||||| || ||||| || ||||| || | ||| | ||| Sbjct 166844 AGGAATTCCTTCTTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTC 166785 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| || || ||||| | ||||| || || || ||||| Sbjct 166784 AACTTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734 Score = 123 bits (136), Expect = 6e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || || || | || || || || ||||| | |||||| || ||||| Sbjct 167381 TTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGTTTACCGGCGAA 167322 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| ||| |||||| |||||||||||| || || |||||||| ||||| || || Sbjct 167321 GATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATT 167262 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| | || ||||| | || || || || || |||| ||| ||||| Sbjct 167261 CTCAATGGTATCAGATGGCTCAACTTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGAC 167202 Query 288462 GAATATCTGCATT 288474 || ||||||||| Sbjct 167201 AAAGATCTGCATT 167189 >seq62 Length=648032 Score = 87.8 bits (96), Expect = 4e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || || || | || || || || ||||| | |||||| || | ||| Sbjct 445504 TTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGTTTACCAGAGAA 445445 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | ||| |||| | |||||||||||| |||| |||||||| ||||| || || Sbjct 445444 GATTAAACGTTGTTCATCTGGTGGGATTCCTTCCGTATCTTGGATTTTAGCTTTAACATT 445385 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | ||| | ||| ||| | | ||||| | | || || | ||| || || Sbjct 445384 TTCAATGGTATCAGAAGGTTCCACTCCTAAGGTGATGATTTCTCCAGTTAAAGTTTTTAC 445325 Query 288462 GAATAT 288467 ||| || Sbjct 445324 GAAGAT 445319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179547435943206