Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq241 152 4e-32 seq569 120 2e-22 seq412 116 3e-21 seq62 104 2e-17 >seq241 Length=949647 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || || || |||||||| ||||| || |||||||| ||||||||||| Sbjct 167644 CCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAA 167585 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | |||||||||||||| || ||| | || ||||| ||||| || ||| Sbjct 167584 AGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGG 167525 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||| ||| ||| |||| || ||||| | ||| || Sbjct 167524 ATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACT 167465 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| ||| |||||||| || || | |||||||| || |||||||| Sbjct 167464 TCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418 Score = 145 bits (160), Expect = 5e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||||||||| || || || || ||||| || |||||||| || | | | ||||| Sbjct 167855 AACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGTACGTCCATCTTC 167796 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 |||||||| |||||| | |||||||||||||| || ||| |||||||||||||| Sbjct 167795 CAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCTTG 167736 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||||| ||| ||| |||| |||||||| | ||| || |||||||| |||||||| Sbjct 167735 GATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTTTT 167676 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || | |||||||| || |||||||| Sbjct 167675 TCCAGTTAATGTTTTTACGAAGATTTGCAT 167646 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| |||||| || |||||||||||||| || ||||| || ||||||||||| Sbjct 166504 CCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAA 166445 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | | |||||||||||||| ||||| | || || || ||||| || ||| Sbjct 166444 AGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGG 166385 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || || || ||| ||| |||| || || ||| ||| || Sbjct 166384 ATTCCTTCCTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGACT 166325 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||||||||| || | || || |||||||||||||| Sbjct 166324 TCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166278 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||||||||| || |||||||| ||||| || |||||||| ||||| ||||| Sbjct 166732 CCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAA 166673 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| | |||||| || ||| | || ||||| |||||||| ||| Sbjct 166672 AGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGG 166613 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| || || ||||| ||| || |||| |||||||| | ||| || Sbjct 166612 ATCCCTTCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACT 166553 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||||||||| || | || || |||||||||||||| Sbjct 166552 TCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || |||||||| || || || |||||||| |||||||| || Sbjct 166960 CCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAA 166901 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | | ||||| | |||||| ||||| | || ||||| ||||| || ||| Sbjct 166900 AGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGA 166841 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| || || || || ||| ||| |||| || ||||| | ||| || Sbjct 166840 ATTCCTTCTTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAACT 166781 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || ||||| ||||||||||| || | || || ||||||||||||||| Sbjct 166780 TCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCATA 166733 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || || || ||||| || ||||| || |||||||| Sbjct 167188 CCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAA 167129 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | | ||||| | |||||| || ||| | || ||||| ||||| || ||| Sbjct 167128 AGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGA 167069 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||||| ||| ||| |||| || ||||| || || Sbjct 167068 ATTCCTTCCTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACT 167009 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| ||||| ||||| || |||| |||||| |||||||| ||||| Sbjct 167008 TCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || || || |||||||| ||||| || |||||||| ||||||||||| Sbjct 167416 CCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAA 167357 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| | |||||| || ||| | |||||||| ||||| || ||| Sbjct 167356 AGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGG 167297 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||| ||| ||| | || || ||||| || || Sbjct 167296 ATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCAACT 167237 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| ||||| || |||| |||||| ||||| || ||||| Sbjct 167236 TCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || |||||||| || || || ||||| || |||||||| Sbjct 166048 CCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAA 165989 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| |||||||| ||||| | |||||||| ||||| || ||| Sbjct 165988 AGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGG 165929 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||| || ||| ||| ||||||| || ||| || || Sbjct 165928 ATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAACT 165869 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| || || || |||| |||||| || || || ||||| Sbjct 165868 TCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| |||||| || || ||||| ||||| || |||||||| ||||||||||| Sbjct 166276 CCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAA 166217 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | |||||||||||||||| ||||| | || || || ||||| || ||| Sbjct 166216 AGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGA 166157 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| || || ||||| ||| ||| |||| || ||||| || || Sbjct 166156 ATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACT 166097 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| ||||| || |||| ||||| ||||| || ||||| Sbjct 166096 TCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050 Score = 113 bits (124), Expect = 3e-20 Identities = 172/245 (70%), Gaps = 5/245 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | |||||| || || || || || || || || ||||| || ||||||||| Sbjct 165820 CCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAA 165761 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | |||||||||||||| || || | ||||| || |||||||| ||| Sbjct 165760 AGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGG 165701 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || || ||||| ||||| || ||| |||| ||||| || || || Sbjct 165700 ATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGACC 165641 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCA-----TATTTGAAA 15184 ||||| || ||||||||||| |||| ||||| || ||||| |||| || | |||| Sbjct 165640 TCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCATCTGTTAATCGAAA 165581 Query 15185 TAAAT 15189 ||||| Sbjct 165580 TAAAT 165576 >seq569 Length=200630 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | | || || || ||||| || || || ||||| |||||||| ||| Sbjct 134621 TGCCACCACGAAGACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGG 134562 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | | ||||| | |||||| |||||| | || ||||| ||||| || || Sbjct 134561 AAAGAGTGCGTCCATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTG 134502 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || || |||||||| ||||| || ||| |||| || |||||| ||| | Sbjct 134501 GGATACCCTCCTTGTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAA 134442 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||||||||| || || ||||| || ||||||||||| Sbjct 134441 CCTCGAGGGTGATGGTTTTACCGGTTAGGGTTTTCACGAAAATTTGCAT 134393 >seq412 Length=275653 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||||||||| |||||||| | || || ||||| || || || ||||| Sbjct 83015 CCACCACGCAATCTTAGGACTAAATGCAACGTTGATTCTTTCTGAATATTATAATCAGAA 82956 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | | ||||| | |||||| || ||| | || ||||||||||| || ||| Sbjct 82955 AGAGTGCGCCCATCTTCGAGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGGG 82896 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| || ||||| || || || ||| |||| || |||||| | || || Sbjct 82895 ATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATTTTCGATGGTATCGGAAGGCTCGACC 82836 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15181 || | || ||||| || || || | |||||| ||||| || |||||||||| Sbjct 82835 TCAAGAGTTATGGTCTTGCCAGTTAAAGTTTTAACAAAGATCTGCATATTTG 82784 >seq62 Length=648032 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 |||||||| || ||||| | || | || |||||||| || | | | ||||| Sbjct 445738 AACTAAATACAGAGTAGATTTCTTATAGATATTGTAATCTGAAAGGGTACGTCCATCTTC 445679 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 |||| ||| | | | | || ||||||||||| || |||||| | ||||||||| Sbjct 445678 CAATTCTTTACGATGGAAAATTAAACGCTGTTGATCCGGTGGAATCCTTTCCTTGTCTTG 445619 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| || ||||||| || | |||||||| || ||| || || ||||| |||||||| Sbjct 445618 AATCTTAACTTTTACATTTCCAATAGTATCAGTAGGTTCCACTTCCAAGGTGATGGTTTT 445559 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || | | ||||||| || |||||||| Sbjct 445558 TCCAGTTAAACTTTTTACGAAGATTTGCAT 445529 Score = 102 bits (112), Expect = 6e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 14957 GCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTC 15016 ||| ||||| || || || ||||| || |||||||| ||||||||||| ||| | | Sbjct 445532 GCATTCTTATTACCAACTGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTAC 445473 Query 15017 TCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTT 15076 | ||||| | |||||| |||| | | || ||||| |||| || ||| ||||||| Sbjct 445472 GACCATCTTCAAGTTGTTTACCAGAGAAGATTAAACGTTGTTCATCTGGTGGGATTCCTT 445413 Query 15077 CCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGG 15136 || | || ||||| ||| ||| |||| || ||||| | ||| || |||||| Sbjct 445412 CCGTATCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTCCTAAGG 445353 Query 15137 TAATGGTTTTACCTGTCAGAGTTTTTACAAAAAT 15170 | ||| ||| || || | ||||||||| || || Sbjct 445352 TGATGATTTCTCCAGTTAAAGTTTTTACGAAGAT 445319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357361174604945