Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_011588.1
Length=127615
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
seq405 89.7 4e-13
>seq1
Length=3368518
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 69543 tttttCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAGACCATTTATTCG 69602
|| ||||||||||||||| ||| || ||| | || || || ||||| || ||||||
Sbjct 2423050 TTCTTCTTTTACCGAGAAACGGCGGTTGAGTACATAAATTGTGGAAAAGTAATATATTCG 2422991
Query 69603 AGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGTACTCG-GATAAATG 69661
| || || | || || || ||||| | || || || | | | ||| || |||||
Sbjct 2422990 CGCGTGGCGAGGGTTTGTAAGGATGATAAAGGTGGGCCGCGGCAATT-TCGTGAGAAATG 2422932
Query 69662 GACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAATTCCCCTTTTACTT 69721
|||||| ||||| ||| || || |||||||||| || || || |||| ||||| || ||
Sbjct 2422931 GACGTCGTTTTTGAAGGCTAGATTAAATTGTTCAGTTCCTGGAGAATATCCCTTCTATTT 2422872
Query 69722 TGACGA 69727
||| ||
Sbjct 2422871 TGATGA 2422866
>seq405
Length=75446
Score = 89.7 bits (98), Expect = 4e-13
Identities = 129/179 (72%), Gaps = 10/179 (6%)
Strand=Plus/Minus
Query 69555 CGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAGACCATTTATTCGAGAGTCGCTCGT 69614
|| |||| || || || | || || |||||||| | || |||||| || ||||| |
Sbjct 10197 CGCGAAGCAGCTGTTGAATACATAAATTGCGGAAAAGCAATCTATTCGCGAATCGCTAGA 10138
Query 69615 GTCTGCAAAAATGATCACGGCGGCCCACATCGGTACT-CG----GATAAATGGACGTCAT 69669
|| || ||||||||| |||| || | || |||| || ||||| |||||| | |
Sbjct 10137 GTTTGTAAAAATGATAACGGAGGT--AAAT---TACTTCGAAGAGATAATTGGACGACGT 10083
Query 69670 TTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAATTCCCCTTTTACTTTGACGAA 69728
|| ||||| |||| ||||||||||| | ||||| || | ||| ||||| || |||||
Sbjct 10082 TTCTAAAGGCTCGTTTAAATTGTTCGATACCCGGGGAGTACCCTTTTTATTTCAACGAA 10024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408207988641272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |