Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq569 131 2e-25
seq241 118 1e-21
seq1284 82.4 7e-11
>seq569
Length=200630
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | ||||||||||| || | ||| || || |||||||| ||||| |||
Sbjct 134619 CCACCACGAAGACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAA 134560
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || || ||||| |||||| |||| || || || ||||| || ||
Sbjct 134559 AGAGTGCGTCCATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGG 134500
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||||||||| |||||| ||||| | ||||| ||| || | || ||
Sbjct 134499 ATACCCTCCTTGTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACC 134440
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116
|||| ||| | ||||| ||||| || ||||| || ||||| ||||| ||
Sbjct 134439 TCGAGGGTGATGGTTTTACCGGTTAGGGTTTTCACGAAAATTTGCATTGC 134390
>seq241
Length=949647
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| | |||| ||| ||||| || | ||||| || ||||| |||||||||||
Sbjct 167189 TCCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGA 167130
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| ||||| ||| || || ||||| || ||| |||| || || || ||||| |||||
Sbjct 167129 AAGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGG 167070
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || ||||| ||| |||||| || | | ||| | ||| || | ||| ||
Sbjct 167069 AATTCCTTCCTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAAC 167010
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | ||||| || |||| |||||| ||||||||||||||
Sbjct 167009 TTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| | |||| ||| ||||| || | || || || ||||| ||||||||||||
Sbjct 165821 TCCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGA 165762
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || || ||| |||| |||||||| || ||||||| || || || || || ||
Sbjct 165761 AAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGG 165702
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| ||||| |||||| ||||||| ||| | | ||| | ||||| | ||||||
Sbjct 165701 GATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGAC 165642
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||||| || |||| ||||| || |||||||||||
Sbjct 165641 CTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955
|||| |||||||||||| | || || |||||||| || |||||||| | |||||
Sbjct 166267 AATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGT 166208
Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015
|| |||| ||||| ||||| |||| ||||| || ||||| ||||| || || ||
Sbjct 166207 CCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGAATTCCTTCT 166148
Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075
|| ||| |||||| || | | ||| | ||| || | ||| ||||| | ||
Sbjct 166147 TTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCCAAAGTA 166088
Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| ||||| || |||| ||||| ||||| ||||||||
Sbjct 166087 ATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| | ||| | ||| || ||||| | || || ||||||||||| ||||||||
Sbjct 167645 TCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGA 167586
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || ||| ||| |||| ||||| || ||| |||| || || || ||||| || ||
Sbjct 167585 AAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGG 167526
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || |||||||| |||||| || | | ||| | ||| || | | || ||
Sbjct 167525 GATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCAC 167466
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | ||| | ||||| || || | |||||||| || || |||||
Sbjct 167465 TTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| | |||| ||| |||||||| | || || || ||||| |||||||||||
Sbjct 166049 TCCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGA 165990
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || || ||| || | ||||||||||| ||||||| || || ||||| || ||
Sbjct 165989 AAGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGG 165930
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064
|| || ||||| | | ||| | | || || | | ||| | |||||| | ||| |
Sbjct 165929 GATTCCTTCCTTAT-CTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAA 165871
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| | || | || || || |||| |||||| || || ||||||||
Sbjct 165870 CTTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| |||| || | || ||||| | || || || ||||| |||||||||||
Sbjct 167873 TCCACCACGTAGGCGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGA 167814
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || || ||| || | ||||| |||||| | ||||| ||||| ||||| || ||
Sbjct 167813 AAGGGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGG 167754
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || |||||||| |||||| || | | ||| | || || | | || ||
Sbjct 167753 GATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCAC 167694
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | ||| | ||||| || || | |||||||| || || |||||
Sbjct 167693 TTCTAAGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167646
>seq1284
Length=72753
Score = 82.4 bits (90), Expect = 7e-11
Identities = 152/221 (69%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 145720 TCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGTC 145779
||||||||||| || | | |||||| || ||||| || | | ||| ||||| || ||
Sbjct 54611 TCGACGGTGAATTGAATGGGTTGAGCTGCGGGTTTCGTTCTTAAATAATACATTCCTGTT 54552
Query 145780 TTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACATGACCGAGTACGTGGGTTCG 145839
|| || || |||| |||||| || || | | || ||||| || |||| |
Sbjct 54551 TTAAGTCCTTGTCGCCAGCCGTAAAAATGAATTGATGTTAAAACGGAGTAAGTCGGTTTG 54492
Query 145840 GCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCCATG 145899
|| || | | ||||| ||||||||| ||||| ||||||| | || | |||||
Sbjct 54491 GCTACGTAAAGATTTAAAGATTGGCTTTGATCGATGAAAGCCCCTCGAGCCGCGGCTTGA 54432
Query 145900 TCTATCATGCACTTTGATTT--AATTTCCCATGCGGTTTTA 145938
| ||| ||||| || |||| ||||||||| | ||||||
Sbjct 54431 TTTATGATGCA--TTTATTTGAAATTTCCCAAACTGTTTTA 54393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475458736010480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |