Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq241 114 3e-20 seq569 109 1e-18 >seq241 Length=949647 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | |||||||| || || ||||||| ||||||||||| | ||| | || Sbjct 166949 TCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACGCCC 166890 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| || || || || || ||||| | ||| || || || ||| |||||||||| Sbjct 166889 ATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCTTT 166830 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| || || ||| | || || | | ||| || ||||| ||||| Sbjct 166829 ATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAACTTCCAAGGTGAT 166770 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | || || ||||||||||| Sbjct 166769 GGTTTTACCGGTTAAGGTCTTAACAAAAATTTG 166737 Score = 113 bits (124), Expect = 1e-19 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||||||||| || |||||||||| ||||| |||| | ||| | || Sbjct 167177 TCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAAAGAGTGCGCCC 167118 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| || || || ||||||||||| | ||| || || || ||| ||||||||| Sbjct 167117 ATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCCTT 167058 Query 199534 CTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592 ||||| || ||| || || || ||| | ||| || | || || || || || || | Sbjct 167057 ATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCTAAAGTAA 166999 Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || || || || | |||||| |||||||| || Sbjct 166998 TAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTG 166965 Score = 105 bits (116), Expect = 2e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| | ||||| || | ||||| || || || ||||||| ||| || || | | ||| Sbjct 166727 TCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAAAGAGT 166668 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||||||| || || || ||||||||||| | ||| || ||||| || || || Sbjct 166667 ACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGGATCCC 166608 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCA-CGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 |||| ||||| || ||| |||| | || ||| | || || | | ||| || |||| Sbjct 166607 TTCTTTATCCTGGAT-TTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACTTCCA 166549 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| || ||||| || | || || ||||||||||| Sbjct 166548 ATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTG 166509 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | || ||||| || |||||||||| ||||| |||| | ||| | ||| Sbjct 166037 TCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGTACGTCC 165978 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| || ||||| || ||||| | ||| || || || || |||||||| Sbjct 165977 ATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTT 165918 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| || || ||| | |||||| | || || || ||||| || || Sbjct 165917 ATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAACTTCCAATGTAAT 165858 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || | |||||| || || || || Sbjct 165857 AGTCTTTCCAGTCAAAGTTTTGACGAAGATCTG 165825 Score = 86.0 bits (94), Expect = 1e-11 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || || || ||||||| |||||| |||| | ||| | |||||||| || || Sbjct 167392 TGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGT 167333 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||||||||| | ||| || || || || |||||||| || || || ||| Sbjct 167332 TTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGAT-TTT 167274 Query 199547 TGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || || || | ||| || | || || || ||||| || || || || || || Sbjct 167273 AGCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGTAATAGTTTTTCCAGT 167214 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | |||||| ||||| || || Sbjct 167213 CAAAGTTTTGACAAAGATCTG 167193 >seq569 Length=200630 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || ||||| |||||||| | ||||||||| | | ||| Sbjct 134613 CGAAGACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTG 134554 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| || || || |||||||| | ||| || || || || || || Sbjct 134553 CGTCCATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCC 134494 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || || ||| ||| || ||||| ||| || | | ||| || || | Sbjct 134493 TCCTTGTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGG 134434 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || || |||||||| |||||||| Sbjct 134433 GTGATGGTTTTACCGGTTAGGGTTTTCACGAAAATTTG 134396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178814702389159