Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq241 114 3e-20
seq569 109 1e-18
>seq241
Length=949647
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||||| || || ||||||| ||||||||||| | ||| | ||
Sbjct 166949 TCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACGCCC 166890
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| || || || || || ||||| | ||| || || || ||| ||||||||||
Sbjct 166889 ATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCTTT 166830
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| || || ||| | || || | | ||| || ||||| |||||
Sbjct 166829 ATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAACTTCCAAGGTGAT 166770
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || | || || |||||||||||
Sbjct 166769 GGTTTTACCGGTTAAGGTCTTAACAAAAATTTG 166737
Score = 113 bits (124), Expect = 1e-19
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||||||||| || |||||||||| ||||| |||| | ||| | ||
Sbjct 167177 TCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAAAGAGTGCGCCC 167118
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| || || || ||||||||||| | ||| || || || ||| |||||||||
Sbjct 167117 ATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCCTT 167058
Query 199534 CTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592
||||| || ||| || || || ||| | ||| || | || || || || || || |
Sbjct 167057 ATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCTAAAGTAA 166999
Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
| || || || || | |||||| |||||||| ||
Sbjct 166998 TAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTG 166965
Score = 105 bits (116), Expect = 2e-17
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| | ||||| || | ||||| || || || ||||||| ||| || || | | |||
Sbjct 166727 TCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAAAGAGT 166668
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||||||||| || || || ||||||||||| | ||| || ||||| || || ||
Sbjct 166667 ACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGGATCCC 166608
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCA-CGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586
|||| ||||| || ||| |||| | || ||| | || || | | ||| || ||||
Sbjct 166607 TTCTTTATCCTGGAT-TTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACTTCCA 166549
Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
| ||||| || ||||| || | || || |||||||||||
Sbjct 166548 ATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTG 166509
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | || ||||| || |||||||||| ||||| |||| | ||| | |||
Sbjct 166037 TCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGTACGTCC 165978
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| || ||||| || ||||| | ||| || || || || ||||||||
Sbjct 165977 ATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTT 165918
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| |||||||| || || ||| | |||||| | || || || ||||| || ||
Sbjct 165917 ATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAACTTCCAATGTAAT 165858
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || | |||||| || || || ||
Sbjct 165857 AGTCTTTCCAGTCAAAGTTTTGACGAAGATCTG 165825
Score = 86.0 bits (94), Expect = 1e-11
Identities = 141/201 (70%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
||||| || || || ||||||| |||||| |||| | ||| | |||||||| || ||
Sbjct 167392 TGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGT 167333
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| ||||||||||| | ||| || || || || |||||||| || || || |||
Sbjct 167332 TTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGAT-TTT 167274
Query 199547 TGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
|| || || || | ||| || | || || || ||||| || || || || || ||
Sbjct 167273 AGCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGTAATAGTTTTTCCAGT 167214
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
| |||||| ||||| || ||
Sbjct 167213 CAAAGTTTTGACAAAGATCTG 167193
>seq569
Length=200630
Score = 109 bits (120), Expect = 1e-18
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | ||| || ||||| |||||||| | ||||||||| | | |||
Sbjct 134613 CGAAGACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTG 134554
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||||| || || || |||||||| | ||| || || || || || ||
Sbjct 134553 CGTCCATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCC 134494
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || || ||| ||| || ||||| ||| || | | ||| || || |
Sbjct 134493 TCCTTGTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGG 134434
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || ||||| || || |||||||| ||||||||
Sbjct 134433 GTGATGGTTTTACCGGTTAGGGTTTTCACGAAAATTTG 134396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178814702389159
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |