Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq241 111 1e-19
seq412 89.7 4e-13
>seq241
Length=949647
Score = 111 bits (122), Expect = 1e-19
Identities = 156/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACG--CGTT 39562
|| || || ||||||| |||| ||| ||||| ||||| ||||| | ||| | |||
Sbjct 167860 CGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTG--AAAGGGTACGTC 167803
Query 39563 CATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTT 39622
|||| ||||||||||| || | ||||| |||||||| ||||| | || | ||||| |
Sbjct 167802 CATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCT 167743
Query 39623 TGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAA 39682
|||| ||||| ||||| | | | || || | |||||| || || || |
Sbjct 167742 TGTCTTGGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGA 167683
Query 39683 TTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| ||||| || ||||| |||||||||||||| |||||
Sbjct 167682 TGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167646
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||| | || ||||||||| | ||| ||| ||||| ||||| ||||| |
Sbjct 166048 CCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAA 165989
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | ||| |||| ||||||||||| || |||| || ||||| || ||||| | ||
Sbjct 165988 AGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGG 165929
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||| || || || || ||||| | ||| ||||| | || ||
Sbjct 165928 ATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAACT 165869
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| ||||| || || || || |||||||| ||||||||||||||
Sbjct 165868 TCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||| | || |||||||| | || ||||||||| || || ||||| |
Sbjct 166276 CCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAA 166217
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | |||| | || || |||||||| || |||| ||||| || || ||||| | ||
Sbjct 166216 AGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGA 166157
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||||| || ||||| ||||| | | | || || | || ||
Sbjct 166156 ATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACT 166097
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||||||||| ||||| || || || ||||| || |||||||||||
Sbjct 166096 TCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| || | || ||| ||||| | || ||||||||| || || ||||| |
Sbjct 167644 CCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAA 167585
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | || |||| || |||||||| ||| | || |||||||| || ||||| | ||
Sbjct 167584 AGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGG 167525
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||| ||||| ||||| ||||| | | | || || | ||||||
Sbjct 167524 ATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACT 167465
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | || || ||||| || ||||| |||||||||||||| |||||
Sbjct 167464 TCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| || | || ||| ||||| | || ||||||||| || || ||||| |
Sbjct 167416 CCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAA 167357
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | || |||| || | |||||| ||| | || || ||||| || ||||| | ||
Sbjct 167356 AGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGG 167297
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||| ||||| ||||| ||||| || | | || || | || ||
Sbjct 167296 ATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCAACT 167237
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| ||||| ||||| || || |||||||| || |||||||||||
Sbjct 167236 TCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190
>seq412
Length=275653
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || ||||| | || || |||||||| || |||||| || ||||||||||| |
Sbjct 83015 CCACCACGCAATCTTAGGACTAAATGCAACGTTGATTCTTTCTGAATATTATAATCAGAA 82956
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | ||| |||| || | |||||| || | |||||||||||||| ||||||| ||
Sbjct 82955 AGAGTGCGCCCATCTTCGAGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGGG 82896
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| || |||||||| || || || | | | | || || | || ||
Sbjct 82895 ATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATTTTCGATGGTATCGGAAGGCTCGACC 82836
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | ||| || || || || ||||||||||| || |||||||||||
Sbjct 82835 TCAAGAGTTATGGTCTTGCCAGTTAAAGTTTTAACAAAGATCTGCAT 82789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347339639046341
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |