Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq78 132 6e-26
>seq78
Length=1060011
Score = 132 bits (146), Expect = 6e-26
Identities = 452/694 (65%), Gaps = 14/694 (2%)
Strand=Plus/Plus
Query 154418 TAAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAA 154477
||||||| | || ||||| || ||| | ||| | || |||||| |||||||| ||
Sbjct 59313 TAAAGATATTTCTTTAGTTCATTCCATGATACCATTGGGATCTTGCACCATGAAATTGAA 59372
Query 154478 TGCAGCAGCAGAACTAATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATAC 154537
| | | ||| | |||||| |||| | | || | | | |||||| |
Sbjct 59373 CTCTACCACTGAAATGATGCCTTGCTCATTGAGGCATTTCACCGAATTACATCCATTCGC 59432
Query 154538 ACCTATGATACAGACCATGGGTTATCAGAAAATTATAGATGACTTACAGAAATGGTTATG 154597
|||| | ||| || | |||||||| |||| | | || | | ||| |||||
Sbjct 59433 ACCTCTTGAACAAACGAAAGGTTATCACCAAATGTTTGCGGAGCTTGAAAAAGATTTATG 59492
Query 154598 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 154657
||| || ||||||| |||| || || ||||||||| || | || || || ||
Sbjct 59493 TGAGATTACAGGGTATGATAAAATTAGTTTCCAACCTAACAGTGGTGCTCAAGGAGAATA 59552
Query 154658 TGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGT 154717
||||| || || || ||| || ||| ||| |||| || | ||| ||||
Sbjct 59553 CGCAGGGCTTCGCGCCATACAATGTTATCATGAAGCGCAAGGAAATCCAGATAGAGATGT 59612
Query 154718 ATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGG 154775
|| || ||||| ||| || ||||| |||||||| || |||||| ||||| ||
Sbjct 59613 TTGCTTAATACCTATTAGT--GCGCATGGTACTAATCCGGCGAGTGCTCAAATGGCTGGA 59670
Query 154776 ATGAAAGTTGTAGGTGTCAAGTGTGATGATG-ATGGTAACATAGACATCAAAGATCTAGA 154834
||| || | | || || || | ||| |||| || || | ||| || |
Sbjct 59671 ATGCGTGTGGAGGCGGTTAAA-GTAAAAATGGATGGATCAATTGATGTTGCCGATTTAAA 59729
Query 154835 GAAGAAAGCAATCATGAATAC--ATTTGAACTGTCATGTATTATGATTACATACCCATCT 154892
|||||||| | ||| | || | | || || | ||||| |||||||||||
Sbjct 59730 AGAGAAAGCAGAAA--AATTCCAATCTCGTTTATCTTGCTTAATGATAACATACCCATCA 59787
Query 154893 ACACATGGTGTATTTGAAACTAACATTAGACAGATATGT--AAGATCGTTCATGACAATG 154950
|| | || || |||||| |||| | | ||||| | | || || ||||||| || |
Sbjct 59788 ACTAACGGAGTTTTTGAAGA-AACAGTTG-CAGATGTCTGCAAAATTATTCATGAAAACG 59845
Query 154951 GTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCAT 155010
| ||||| || ||| | ||||| || || | ||||| || || ||| || | |||
Sbjct 59846 GCGGTCAAGTTTATTTAGATGGTGCTAACATGAATGCTCAAGTTGGATTATGCAGACCTG 59905
Query 155011 GTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATG 155070
|||| || || ||||||| |||| |||| ||||||||||| || || ||||| ||||
Sbjct 59906 GTGATTACGGAAGCGATGTATCTCATTTAAATTTACATAAAACGTTTTGCATTCCTCATG 59965
Query 155071 GAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
| ||||| || || || | |||||||| |||||
Sbjct 59966 GTGGTGGTGGCCCAGGAATGGGTCCTATTGGTGT 59999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579161561387680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |