Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq78 132 6e-26 >seq78 Length=1060011 Score = 132 bits (146), Expect = 6e-26 Identities = 452/694 (65%), Gaps = 14/694 (2%) Strand=Plus/Plus Query 154418 TAAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAA 154477 ||||||| | || ||||| || ||| | ||| | || |||||| |||||||| || Sbjct 59313 TAAAGATATTTCTTTAGTTCATTCCATGATACCATTGGGATCTTGCACCATGAAATTGAA 59372 Query 154478 TGCAGCAGCAGAACTAATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATAC 154537 | | | ||| | |||||| |||| | | || | | | |||||| | Sbjct 59373 CTCTACCACTGAAATGATGCCTTGCTCATTGAGGCATTTCACCGAATTACATCCATTCGC 59432 Query 154538 ACCTATGATACAGACCATGGGTTATCAGAAAATTATAGATGACTTACAGAAATGGTTATG 154597 |||| | ||| || | |||||||| |||| | | || | | ||| ||||| Sbjct 59433 ACCTCTTGAACAAACGAAAGGTTATCACCAAATGTTTGCGGAGCTTGAAAAAGATTTATG 59492 Query 154598 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 154657 ||| || ||||||| |||| || || ||||||||| || | || || || || Sbjct 59493 TGAGATTACAGGGTATGATAAAATTAGTTTCCAACCTAACAGTGGTGCTCAAGGAGAATA 59552 Query 154658 TGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGT 154717 ||||| || || || ||| || ||| ||| |||| || | ||| |||| Sbjct 59553 CGCAGGGCTTCGCGCCATACAATGTTATCATGAAGCGCAAGGAAATCCAGATAGAGATGT 59612 Query 154718 ATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGG 154775 || || ||||| ||| || ||||| |||||||| || |||||| ||||| || Sbjct 59613 TTGCTTAATACCTATTAGT--GCGCATGGTACTAATCCGGCGAGTGCTCAAATGGCTGGA 59670 Query 154776 ATGAAAGTTGTAGGTGTCAAGTGTGATGATG-ATGGTAACATAGACATCAAAGATCTAGA 154834 ||| || | | || || || | ||| |||| || || | ||| || | Sbjct 59671 ATGCGTGTGGAGGCGGTTAAA-GTAAAAATGGATGGATCAATTGATGTTGCCGATTTAAA 59729 Query 154835 GAAGAAAGCAATCATGAATAC--ATTTGAACTGTCATGTATTATGATTACATACCCATCT 154892 |||||||| | ||| | || | | || || | ||||| ||||||||||| Sbjct 59730 AGAGAAAGCAGAAA--AATTCCAATCTCGTTTATCTTGCTTAATGATAACATACCCATCA 59787 Query 154893 ACACATGGTGTATTTGAAACTAACATTAGACAGATATGT--AAGATCGTTCATGACAATG 154950 || | || || |||||| |||| | | ||||| | | || || ||||||| || | Sbjct 59788 ACTAACGGAGTTTTTGAAGA-AACAGTTG-CAGATGTCTGCAAAATTATTCATGAAAACG 59845 Query 154951 GTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCAT 155010 | ||||| || ||| | ||||| || || | ||||| || || ||| || | ||| Sbjct 59846 GCGGTCAAGTTTATTTAGATGGTGCTAACATGAATGCTCAAGTTGGATTATGCAGACCTG 59905 Query 155011 GTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATG 155070 |||| || || ||||||| |||| |||| ||||||||||| || || ||||| |||| Sbjct 59906 GTGATTACGGAAGCGATGTATCTCATTTAAATTTACATAAAACGTTTTGCATTCCTCATG 59965 Query 155071 GAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | ||||| || || || | |||||||| ||||| Sbjct 59966 GTGGTGGTGGCCCAGGAATGGGTCCTATTGGTGT 59999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579161561387680