Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq78 125 8e-24 >seq78 Length=1060011 Score = 125 bits (138), Expect = 8e-24 Identities = 169/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 159550 ATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT--A 159607 ||||| ||||| ||||| || | || || |||||| ||||| | ||||| | | | Sbjct 59770 ATGATAACATACCCATCAACTAACGGAGTTTTTGAAG-AAACAGTTG-CAGATGTCTGCA 59827 Query 159608 AGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGG 159667 | ||| ||||||| || || ||||| || ||| | |||||||| || | ||||| || | Sbjct 59828 AAATTATTCATGAAAACGGCGGTCAAGTTTATTTAGATGGTGCTAACATGAATGCTCAAG 59887 Query 159668 TAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGA 159727 | || || | ||| |||| || || ||||||| |||| |||| |||||||| | Sbjct 59888 TTGGATTATGCAGACCTGGTGATTACGGAAGCGATGTATCTCATTTAAATTTACATAAAA 59947 Query 159728 CATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 | || || ||||| ||||| ||||| || || || | |||||||||||||| Sbjct 59948 CGTTTTGCATTCCTCATGGTGGTGGTGGCCCAGGAATGGGTCCTATTGGTGT 59999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587999179520720