Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq241 168 1e-36 seq412 131 4e-25 seq62 129 1e-24 >seq241 Length=949647 Score = 168 bits (186), Expect = 1e-36 Identities = 167/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| || | || || || || ||||||||||| |||||||| | |||||| | ||| Sbjct 167632 CTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCA 167573 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| | || ||||| |||||||| | |||||||| ||||| || || ||||| ||| Sbjct 167572 TCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTG 167513 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 ||||| ||||| || || || |||||||| || ||| ||||||||| ||||| | Sbjct 167512 TCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGATG 167453 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || ||||| || || ||||||||||| | ||||||| Sbjct 167452 GTTTTTCCAGTTAATGTTTTTACGAAGATTTGCATT 167417 Score = 163 bits (180), Expect = 6e-35 Identities = 170/223 (76%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||| ||||| || || ||||| ||||||||||| | |||||| Sbjct 167183 TCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAAAGAGT 167124 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||||||| || || ||||| |||||||| | |||||||| ||||||||||| || Sbjct 167123 GCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATTCC 167064 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || || || ||||| || || || |||||||| || || || ||||| | Sbjct 167063 TTCCTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCTAA 167004 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| || ||||| ||||||||||| || || | |||||| Sbjct 167003 AGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCATT 166961 Score = 150 bits (166), Expect = 4e-31 Identities = 167/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | |||||||| || || ||||| ||||||||||| | |||||| Sbjct 166043 TCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGT 165984 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | || || || || ||||| | |||||||| ||||| || || || Sbjct 165983 ACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCC 165924 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || |||||||| || || || || || |||||||| || || ||||| | Sbjct 165923 TTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAACTTCCAA 165864 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| |||||||| ||||||||||| ||||| | |||||| Sbjct 165863 TGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCATT 165821 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| || | || || || || |||||||| || |||||||| | |||||| | ||| Sbjct 167404 CTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCA 167345 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| || || ||||| |||||||| | |||||||| ||||| || || ||||| ||| Sbjct 167344 TCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTG 167285 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 ||||| ||||| || || ||||||||||| || || || ||||| | |||| Sbjct 167284 TCTTGGATTTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGTAATA 167225 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || ||||| ||||||||||| || || | |||||| Sbjct 167224 GTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCATT 167189 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || |||||||| || ||||| ||||||||||| | ||| || | |||||||| | || Sbjct 167848 TGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGTACGTCCATCTTCCAATTGT 167789 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| ||||| || | || ||||| ||||| || || ||||| |||||||| ||||| Sbjct 167788 TTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTA 167729 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || || ||||| || || ||| ||||||||| | ||| | || ||||| || Sbjct 167728 GCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTTTTTCCAGTT 167669 Query 195118 AAAGTTTTTACGAACACTTGCATT 195141 || ||||||||||| | ||||||| Sbjct 167668 AATGTTTTTACGAAGATTTGCATT 167645 Score = 141 bits (156), Expect = 2e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || || || || |||||||| || |||||||| | |||||| Sbjct 166271 TCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGT 166212 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| | || ||||| || ||||| | ||||||||| ||||||||||| || Sbjct 166211 GCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGAATTCC 166152 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| || || ||||| || || || |||||||| || || || ||||| | Sbjct 166151 TTCTTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCCAA 166092 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| || ||||| ||||| ||||| || || | |||||| Sbjct 166091 AGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCATT 166049 Score = 140 bits (154), Expect = 7e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 |||||| || | || || ||||| |||||||| || || ||||| | |||||| | || Sbjct 166721 TCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAAAGAGTACGTCC 166662 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| || || ||||| |||||||| | |||||||||||||| || || |||||||| Sbjct 166661 ATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGGATCCCTTCTTT 166602 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 || || ||||| || ||||| ||||| || || ||| ||| ||||| | || | Sbjct 166601 ATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACTTCCAATGTGAT 166542 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || || || || || || || | ||||||| Sbjct 166541 GGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166505 Score = 140 bits (154), Expect = 7e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || ||||| || |||||||| || ||||| || | |||||| Sbjct 166955 TCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGT 166896 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||||||| || || ||||| || ||||| | |||||||| ||||||||||| || Sbjct 166895 ACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATTCC 166836 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| || || || || || || || ||||| || || ||| ||| ||||| | Sbjct 166835 TTCTTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAACTTCCAA 166776 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | || || || || || || || || || | |||||| Sbjct 166775 GGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734 Score = 136 bits (150), Expect = 9e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||||| ||||| ||||| || || |||||||| | |||||| Sbjct 166499 TCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAAAGAGT 166440 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||||||| | || ||||| || ||||| | ||||||||| ||||| || || || Sbjct 166439 GCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGGATTCC 166380 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || ||||| || || || || || ||||||||||| || ||| ||||| | Sbjct 166379 TTCCTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGACTTCCAA 166320 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | || || || || || || || || || | ||||||| Sbjct 166319 TGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166277 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 |||||| || | ||| ||||| || || ||||| ||||||||||||| ||| || | || Sbjct 165809 TCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAAAGGGTACGTCC 165750 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | || || || || ||||| | |||||||||||||| || || || ||||| Sbjct 165749 ATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGGATCCCCTCTTT 165690 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||| || ||||| ||| || || ||||| ||||| || || || || | || | Sbjct 165689 GTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGACCTCTAACGTGAT 165630 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| ||||| ||||| | ||||| Sbjct 165629 GGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594 >seq412 Length=275653 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || ||||| |||||||| ||||| | |||||| | |||||||||||| || || || Sbjct 82985 GTTGATTCTTTCTGAATATTATAATCAGAAAGAGTGCGCCCATCTTCGAGTTGTTTTCCC 82926 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 ||||| || | || ||||| || || || || || ||||||||||| || || |||| Sbjct 82925 GCGAAAATTAAACGCTGTTGATCCGGTGGGATTCCCTCTTTGTCTTGGATCTTAGCCTTG 82866 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || || ||||| || ||| || || ||||| || | ||||| || || |||||| Sbjct 82865 ACATTTTCGATGGTATCGGAAGGCTCGACCTCAAGAGTTATGGTCTTGCCAGTTAAAGTT 82806 Query 195124 TTTACGAACACTTGCAT 195140 || || || | ||||| Sbjct 82805 TTAACAAAGATCTGCAT 82789 >seq62 Length=648032 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || || ||||||||||| |||||||| | |||||| | |||||||| || || Sbjct 445515 TGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGT 445456 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| | |||||| | ||||||| ||||| || || ||||| | ||||| ||||| Sbjct 445455 TTACCAGAGAAGATTAAACGTTGTTCATCTGGTGGGATTCCTTCCGTATCTTGGATTTTA 445396 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || || |||||||| || ||| ||||||| | | ||| | | | ||| || Sbjct 445395 GCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTCCTAAGGTGATGATTTCTCCAGTT 445336 Query 195118 AAAGTTTTTACGAA 195131 |||||||||||||| Sbjct 445335 AAAGTTTTTACGAA 445322 Score = 96.9 bits (106), Expect = 8e-15 Identities = 94/119 (79%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 194941 AGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTA 195000 || || || ||||||||||| |||||||| | |||||| | |||||||| || || ||| Sbjct 445314 AGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGTTTA 445255 Query 195001 CCTGCGAAGAT--AAGTCG-TTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || |||||||| || | | |||||| ||||| || || ||||| |||| ||| ||||| Sbjct 445254 CCAGCGAAGATTAAACTTGTTTGTTGATCTGGTGGGATTCCTTCCTTGTATTGGATTTT 445196 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 194941 AGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTA 195000 ||||| || | || | ||||||||||| | ||| || | |||||||| | | ||| Sbjct 445728 AGAGTAGATTTCTTATAGATATTGTAATCTGAAAGGGTACGTCCATCTTCCAATTCTTTA 445669 Query 195001 CCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGC 195060 | ||| || | || ||||| || || ||||| | ||| ||||||||||| || Sbjct 445668 CGATGGAAAATTAAACGCTGTTGATCCGGTGGAATCCTTTCCTTGTCTTGAATCTTAACT 445609 Query 195061 TTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAA 195120 || || || |||| || || | | ||||||||| | ||| | || ||||| || ||| Sbjct 445608 TTTACATTTCCAATAGTATCAGTAGGTTCCACTTCCAAGGTGATGGTTTTTCCAGTTAAA 445549 Query 195121 GTTTTTACGAACACTTGCATT 195141 |||||||||| | ||||||| Sbjct 445548 CTTTTTACGAAGATTTGCATT 445528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109380998796059