Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq241 107 1e-18
seq569 105 4e-18
seq412 87.8 1e-12
>seq241
Length=949647
Score = 107 bits (118), Expect = 1e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| |||||||| ||||| |||||||| | || ||| || || || || || || |
Sbjct 165822 TTCCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGG 165763
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
||||| | ||| |||| || | |||||||||||||| || | ||||| |||||| | |
Sbjct 165762 AAAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTG 165703
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | |||||| ||||| || ||| || || | | || | ||| | ||| |
Sbjct 165702 GGATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGA 165643
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | || |||||||| || || | || ||||| || ||||||||
Sbjct 165642 CCTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594
Score = 98.7 bits (108), Expect = 6e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| || ||||| ||||| ||||| |||| || ||| || || || || || || |
Sbjct 166050 TTCCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAG 165991
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | ||| |||| |||| |||||||| ||||| || | ||||| || ||| | |
Sbjct 165990 AAAGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTG 165931
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | || ||||| || |||||| ||| || | |||| | || | |||||
Sbjct 165930 GGATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAA 165871
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | || || || ||||| || | ||| || || |||||||||||
Sbjct 165870 CTTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
||||||| ||||| ||||| ||||| || | || |||||| || ||||| || || |
Sbjct 166278 TTCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAG 166219
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | ||| | || || | ||||| || ||||| |||| |||||| || ||| | |
Sbjct 166218 AAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAG 166159
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | || || || || || || ||| || | | || | ||| | |||||
Sbjct 166158 GAATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAA 166099
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | || || |||||||| || | || || ||||||||||||||
Sbjct 166098 CTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/231 (69%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| || || |||||||| || || || | || |||||| || ||||| || || |
Sbjct 167418 TTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAG 167359
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | || |||| || || ||||| ||||| || || | ||||| || ||| | |
Sbjct 167358 AAAGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTG 167299
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTC 34930
| | || |||||||| || || ||| || || || || | ||| | |||
Sbjct 167298 GGATTCCTTCCTTGTCTTGGATTTTAGCTTTAAC--ATTCTCAATGGTATCAGATGGCTC 167241
Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||| || | || || |||||||| || | ||| || ||||||||||||||
Sbjct 167240 AACTTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| || || |||||||| || || || | || |||||| |||||||| || || |
Sbjct 167646 TTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAG 167587
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | || |||| || | ||||| ||||| || |||| ||||| || ||| | |
Sbjct 167586 AAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTG 167527
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | || |||||||| || || ||| || | | || | ||| | || |
Sbjct 167526 GGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCA 167467
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | ||| ||||||||||| || | || || || ||||| |||||
Sbjct 167466 CTTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418
>seq569
Length=200630
Score = 105 bits (116), Expect = 4e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||||||||| || ||| || |||||||| ||||| ||||| | ||| ||||
Sbjct 134605 CAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGTCCATC 134546
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
||||| ||||| || || || |||| ||||| || ||| | || | |||||||||||
Sbjct 134545 TTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCCTCCTTGTC 134486
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
|| || ||||| | | || | || || ||||| |||| ||| |||||
Sbjct 134485 TTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGGGTGATGGT 134426
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||| || || || || ||||| || || |||||
Sbjct 134425 TTTACCGGTTAGGGTTTTCACGAAAATTTGCAT 134393
>seq412
Length=275653
Score = 87.8 bits (96), Expect = 1e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
|||||||||||| ||||| || ||||| | || |||| || || |||||||| || ||
Sbjct 82980 TTCTTTCTGAATATTATAATCAGAAAGAGTGCGCCCATCTTCGAGTTGTTTTCCCGCGAA 82921
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|||| || || || || | || | ||||| ||||| ||||| |||||
Sbjct 82920 AATTAAACGCTGTTGATCCGGTGGGATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATT 82861
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | || | ||| || || | |||||||| || || || | ||| || ||
Sbjct 82860 TTCGATGGTATCGGAAGGCTCGACCTCAAGAGTTATGGTCTTGCCAGTTAAAGTTTTAAC 82801
Query 34970 AAAGATCTGCATATTCGTAGA 34990
||||||||||||||| || ||
Sbjct 82800 AAAGATCTGCATATTTGTGGA 82780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324605600047656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |