Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq295 107 3e-18
>seq295
Length=373786
Score = 107 bits (118), Expect = 3e-18
Identities = 184/261 (70%), Gaps = 12/261 (5%)
Strand=Plus/Plus
Query 104959 tttAGATTCTTGTGGATTTCACTT-TCGAAAAGAAGGTGATTTAGGACCAATTTATGGAT 105017
|||||| || ||| ||| ||| ||| ||||||| ||||| ||||| |||||||| |
Sbjct 5425 TTTAGACTCAATTGG-TTTAACTGATCGTGAAGAAGGCGATTTGGGACCTATTTATGGTT 5483
Query 105018 TTCAATGGAGACATGCTGGAGCTCAATATATCGACTGTG-ATACCGACTATACCGGCCAA 105076
|||||||||||||| ||||||| ||||| | | || | || || ||||| ||
Sbjct 5484 TTCAATGGAGACATTATGGAGCTGAATAT-GGTAATATGCACACTGATTATACTAATAAA 5542
Query 105077 GGTATAGACCAATTAAGTCAAGTTATAGAAACTATAAAAAATAACCCCGGGTGTCGAAGA 105136
||||| || ||||||| | ||||| | ||||| |||||||| || ||||||
Sbjct 5543 GGTATTGATCAATTAATGGATGTTATTAATACTATTAAAAATAAACCAACTGATCGAAGG 5602
Query 105137 ATAATTATAGATAGTTGGAATGTGTCACAATTAT----CAGATATGGCTCTTCCACCGTG 105192
|||||||| | |||||| | || | || | | ||||| | || || ||
Sbjct 5603 ATAATTATGTGTGCTTGGAA----CCCCATTGATATCCCTAAAATGGCATTACCTCCTTG 5658
Query 105193 TCATTGTTTGGTACAATTTTA 105213
||||||||| || ||||||||
Sbjct 5659 TCATTGTTTAGTTCAATTTTA 5679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658344956006920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |