Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq295 107 3e-18 >seq295 Length=373786 Score = 107 bits (118), Expect = 3e-18 Identities = 184/261 (70%), Gaps = 12/261 (5%) Strand=Plus/Plus Query 104959 tttAGATTCTTGTGGATTTCACTT-TCGAAAAGAAGGTGATTTAGGACCAATTTATGGAT 105017 |||||| || ||| ||| ||| ||| ||||||| ||||| ||||| |||||||| | Sbjct 5425 TTTAGACTCAATTGG-TTTAACTGATCGTGAAGAAGGCGATTTGGGACCTATTTATGGTT 5483 Query 105018 TTCAATGGAGACATGCTGGAGCTCAATATATCGACTGTG-ATACCGACTATACCGGCCAA 105076 |||||||||||||| ||||||| ||||| | | || | || || ||||| || Sbjct 5484 TTCAATGGAGACATTATGGAGCTGAATAT-GGTAATATGCACACTGATTATACTAATAAA 5542 Query 105077 GGTATAGACCAATTAAGTCAAGTTATAGAAACTATAAAAAATAACCCCGGGTGTCGAAGA 105136 ||||| || ||||||| | ||||| | ||||| |||||||| || |||||| Sbjct 5543 GGTATTGATCAATTAATGGATGTTATTAATACTATTAAAAATAAACCAACTGATCGAAGG 5602 Query 105137 ATAATTATAGATAGTTGGAATGTGTCACAATTAT----CAGATATGGCTCTTCCACCGTG 105192 |||||||| | |||||| | || | || | | ||||| | || || || Sbjct 5603 ATAATTATGTGTGCTTGGAA----CCCCATTGATATCCCTAAAATGGCATTACCTCCTTG 5658 Query 105193 TCATTGTTTGGTACAATTTTA 105213 ||||||||| || |||||||| Sbjct 5659 TCATTGTTTAGTTCAATTTTA 5679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658344956006920