Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1159 358 8e-94
>seq1159
Length=103958
Score = 358 bits (396), Expect = 8e-94
Identities = 593/853 (70%), Gaps = 6/853 (1%)
Strand=Plus/Plus
Query 36884 TTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATT 36943
|||||| || || ||||| | | || || ||||| || || || ||||||
Sbjct 49831 TTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATCAGATATAAG 49890
Query 36944 TTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAG 37003
| |||||||||||||||||||| || ||| |||| | ||| | ||| | |
Sbjct 49891 ATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAGTTCAGTTAA 49950
Query 37004 AAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAG 37063
| | ||| |||||||| || ||||| | |||||| | | || || || ||||
Sbjct 49951 TAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCATCCCGATTAA 50010
Query 37064 TTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTAT 37123
| || |||| ||||| | |||| | ||| ||| || ||||| || ||
Sbjct 50011 ACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATCGCGAATAAT 50070
Query 37124 ATTAACAATAACTTCTTCAGTTGGGGGATATTT--TAA-ATATTTAAACAATAAACATGC 37180
| | ||| ||| | ||| || | || ||| |||| ||||||||||||| ||
Sbjct 50071 ACTCGTTATACGTTCCT---TTGACGGCTTTTGAATAAGATATGTAAACAATAAACAAGC 50127
Query 37181 AAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGG 37240
||| || |||||||||||||||| | || |||||||||||||| ||||| || ||
Sbjct 50128 AAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTTAAACCGGG 50187
Query 37241 CATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACC 37300
||||||||| | ||||| | |||||| || ||||||||| ||| ||||||||||||||
Sbjct 50188 CATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAGAAAATACC 50247
Query 37301 TTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCA 37360
||||| || ||||| || || | |||| || ||||| | | | | | ||||||
Sbjct 50248 CTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTACTAATCCA 50307
Query 37361 tttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAG 37420
||| | |||||| || || ||||||||| || ||||| || || || || |
Sbjct 50308 ATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCGTTAAATAA 50367
Query 37421 AAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGA 37480
||| | ||||| || ||| | |||||||| ||||||| | || |||||||||||
Sbjct 50368 AAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTACATTTCAGA 50427
Query 37481 GTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAAC 37540
|||||||||||||||||| || |||||||| |||||||| | ||||| | || |||||
Sbjct 50428 GTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTTACCTGAAC 50487
Query 37541 ATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAA 37600
|| | | ||| | | | |||| ||||| || || || |||||| ||| ||||| ||
Sbjct 50488 TTCTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCAGCAAAAAA 50547
Query 37601 AGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAAT 37660
|| | ||||| |||||||| | ||| | || | |||| ||| ||||| ||| |
Sbjct 50548 GGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTTGCCAATGATTGAG 50607
Query 37661 ATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACAT 37720
|||||| || | ||| ||||| ||| ||||||||| || || |||| || |
Sbjct 50608 ATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCGCCTGTTTGTATTT 50667
Query 37721 CGTCCAAATATCA 37733
|| ||||||||||
Sbjct 50668 CGCCCAAATATCA 50680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592264402175080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |