Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1159 358 8e-94 >seq1159 Length=103958 Score = 358 bits (396), Expect = 8e-94 Identities = 593/853 (70%), Gaps = 6/853 (1%) Strand=Plus/Plus Query 36884 TTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATT 36943 |||||| || || ||||| | | || || ||||| || || || |||||| Sbjct 49831 TTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATCAGATATAAG 49890 Query 36944 TTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAG 37003 | |||||||||||||||||||| || ||| |||| | ||| | ||| | | Sbjct 49891 ATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAGTTCAGTTAA 49950 Query 37004 AAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAG 37063 | | ||| |||||||| || ||||| | |||||| | | || || || |||| Sbjct 49951 TAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCATCCCGATTAA 50010 Query 37064 TTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTAT 37123 | || |||| ||||| | |||| | ||| ||| || ||||| || || Sbjct 50011 ACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATCGCGAATAAT 50070 Query 37124 ATTAACAATAACTTCTTCAGTTGGGGGATATTT--TAA-ATATTTAAACAATAAACATGC 37180 | | ||| ||| | ||| || | || ||| |||| ||||||||||||| || Sbjct 50071 ACTCGTTATACGTTCCT---TTGACGGCTTTTGAATAAGATATGTAAACAATAAACAAGC 50127 Query 37181 AAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGG 37240 ||| || |||||||||||||||| | || |||||||||||||| ||||| || || Sbjct 50128 AAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTTAAACCGGG 50187 Query 37241 CATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACC 37300 ||||||||| | ||||| | |||||| || ||||||||| ||| |||||||||||||| Sbjct 50188 CATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAGAAAATACC 50247 Query 37301 TTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCA 37360 ||||| || ||||| || || | |||| || ||||| | | | | | |||||| Sbjct 50248 CTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTACTAATCCA 50307 Query 37361 tttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAG 37420 ||| | |||||| || || ||||||||| || ||||| || || || || | Sbjct 50308 ATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCGTTAAATAA 50367 Query 37421 AAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGA 37480 ||| | ||||| || ||| | |||||||| ||||||| | || ||||||||||| Sbjct 50368 AAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTACATTTCAGA 50427 Query 37481 GTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAAC 37540 |||||||||||||||||| || |||||||| |||||||| | ||||| | || ||||| Sbjct 50428 GTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTTACCTGAAC 50487 Query 37541 ATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAA 37600 || | | ||| | | | |||| ||||| || || || |||||| ||| ||||| || Sbjct 50488 TTCTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCAGCAAAAAA 50547 Query 37601 AGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAAT 37660 || | ||||| |||||||| | ||| | || | |||| ||| ||||| ||| | Sbjct 50548 GGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTTGCCAATGATTGAG 50607 Query 37661 ATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACAT 37720 |||||| || | ||| ||||| ||| ||||||||| || || |||| || | Sbjct 50608 ATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCGCCTGTTTGTATTT 50667 Query 37721 CGTCCAAATATCA 37733 || |||||||||| Sbjct 50668 CGCCCAAATATCA 50680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592264402175080