Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq241 174 1e-38 seq62 134 1e-26 seq412 129 5e-25 >seq241 Length=949647 Score = 174 bits (192), Expect = 1e-38 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| |||||||| | || |||||||| ||||| ||||||||||| || |||||||| | Sbjct 167646 TTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAG 167587 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | |||| || ||||| ||||| || || || ||||| |||||||| || | Sbjct 167586 AAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTG 167527 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || ||||| || ||||| ||||| ||| ||| |||| | || ||||| | ||||| Sbjct 167526 GGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCA 167467 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| || |||| ||||| || ||||| |||||||| || || ||||| Sbjct 167466 CTTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418 Score = 174 bits (192), Expect = 1e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298 |||||| || | || || | ||||||||| || || ||||| ||||| ||||||||||| Sbjct 167876 ATTTCCACCACGTAGGCGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATC 167817 Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 | | || | |||| |||||||| ||||| || || ||||||||||||||||| || Sbjct 167816 TGAAAGGGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGG 167757 Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418 || || ||||| || ||||| ||||| ||| ||| |||| | ||| ||||| | ||| Sbjct 167756 TGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTC 167697 Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||| | |||| ||||| || ||||| |||||||| || || ||||| Sbjct 167696 CACTTCTAAGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167646 Score = 161 bits (178), Expect = 8e-35 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | || || |||||||| || ||||| ||||| ||||||||||| | Sbjct 166050 TTCCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAG 165991 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | |||| |||||||| || || ||||| |||||||| |||||||| || | Sbjct 165990 AAAGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTG 165931 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || ||||| ||||||||||| || ||| ||| |||||| ||||| || | || | Sbjct 165930 GGATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAA 165871 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | || | || || || || |||||||| || || |||||||| Sbjct 165870 CTTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822 Score = 161 bits (178), Expect = 8e-35 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| || | || || ||||| ||||| ||||||||||| || |||||||| | Sbjct 166278 TTCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAG 166219 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | || || ||||| ||||| ||||| || || || |||||||| || | Sbjct 166218 AAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAG 166159 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| ||||||||||| || ||||| ||| ||| |||| | || ||||| | || | Sbjct 166158 GAATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAA 166099 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | ||| | ||||| || || || ||||| ||||| |||||||| Sbjct 166098 CTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050 Score = 161 bits (178), Expect = 8e-35 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| || | || |||||||||||||| |||||||| || || |||||||| | Sbjct 166506 TTCCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAG 166447 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | |||| || ||||| ||||| ||||| || || || |||||||| || | Sbjct 166446 AAAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTG 166387 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || ||||| |||||||| || || ||| ||| |||| | ||||| || | ||| | Sbjct 166386 GGATTCCTTCCTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGA 166327 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | |||| ||||| || ||||| || || ||||| || ||||| Sbjct 166326 CTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166278 Score = 156 bits (172), Expect = 3e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | || |||||||| || || ||||||||||| || ||||| || | Sbjct 166962 TTCCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAG 166903 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | |||| || | ||| ||||| ||||| || ||||| |||||||| || | Sbjct 166902 AAAGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAG 166843 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| ||||||||||| || || || ||| ||| |||| | || ||||| | ||| | Sbjct 166842 GAATTCCTTCTTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAA 166783 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | |||| ||||| |||||||| || || ||||| || ||||| Sbjct 166782 CTTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734 Score = 156 bits (172), Expect = 3e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| |||||||| | || |||||||| ||||| ||||||||||| || |||||||| | Sbjct 167418 TTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAG 167359 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | |||| || | ||| ||||| || || |||||||| |||||||| || | Sbjct 167358 AAAGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTG 167299 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || ||||| || ||||| ||||| ||| ||| | || | || ||||| | || | Sbjct 167298 GGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCAA 167239 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | || | ||||| || || |||||||| ||||| |||||||| Sbjct 167238 CTTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190 Score = 152 bits (168), Expect = 4e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | || || || || || |||||||| ||||| ||||||||||| | Sbjct 167190 TTCCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAG 167131 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | |||| || | ||| ||||| || || || ||||| |||||||| || | Sbjct 167130 AAAGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAG 167071 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| ||||| ||||| || ||||| ||| ||| |||| | || ||||| | || | Sbjct 167070 GAATTCCTTCCTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAA 167011 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | ||| | ||||| || || |||||||| ||||| |||||||| Sbjct 167010 CTTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || |||||||| ||||| ||||||||||| || || ||||| | | ||| | |||| Sbjct 166717 AACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAAAGAGTACGTCCATCT 166658 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | ||| ||||| || || || ||||| ||||| || || || || ||||||||||| Sbjct 166657 TCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGGATCCCTTCTTTATCC 166598 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || ||||| ||| || |||| | ||| ||||| | ||| ||||| | |||| ||| Sbjct 166597 TGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACTTCCAATGTGATGGTT 166538 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| || || ||||| || ||||| Sbjct 166537 TTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || || || | || || || || || || ||||| ||||| ||||||||||||| Sbjct 165822 TTCCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGG 165763 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | |||| || ||||| || || ||||| ||||| || ||||| || || | Sbjct 165762 AAAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTG 165703 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || || ||||| || || ||||| || ||| |||| | ||||||||| | || | Sbjct 165702 GGATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGA 165643 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | |||| ||||| || || || ||||| || || |||||||| Sbjct 165642 CCTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594 >seq62 Length=648032 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 101240 TTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299 ||||| || | || || | |||||||| || ||||||| || | ||||||||||| Sbjct 445758 TTTCCACCACGTAGGCGAATAACTAAATACAGAGTAGATTTCTTATAGATATTGTAATCT 445699 Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACC-TGCAAATATCAAACGCTGTTGATCGGG 101358 | | || | |||| ||||||| |||| || ||| || |||||||||||||| || Sbjct 445698 GAAAGGGTACGTCCATCTTCCAATTCTTTACGATGGAAA-ATTAAACGCTGTTGATCCGG 445640 Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418 ||||| | ||| || |||||||| || ||||||| || | | ||| |||| | ||| Sbjct 445639 TGGAATCCTTTCCTTGTCTTGAATCTTAACTTTTACATTTCCAATAGTATCAGTAGGTTC 445580 Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||| | |||| ||||| || |||||| ||||||| || || ||||| Sbjct 445579 CACTTCCAAGGTGATGGTTTTTCCAGTTAAACTTTTTACGAAGATTTGCAT 445529 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || ||||| ||||||||||| || |||||||| | | ||| | |||| || Sbjct 445521 ACCAACTGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCA 445462 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| ||||| | || || ||||| |||| ||| || || || ||||| ||||||| Sbjct 445461 AGTTGTTTACCAGAGAAGATTAAACGTTGTTCATCTGGTGGGATTCCTTCCGTATCTTGG 445402 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||| ||| |||| | || ||||| | ||||||| | | |||| ||| Sbjct 445401 ATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTCCTAAGGTGATGATTTCT 445342 Query 101441 CCGGTTAAAGTTTTTACAAATAT 101463 || |||||||||||||| || || Sbjct 445341 CCAGTTAAAGTTTTTACGAAGAT 445319 >seq412 Length=275653 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 |||||||| | || |||||||| || ||||| ||||| | | ||| | |||| || Sbjct 82997 ACTAAATGCAACGTTGATTCTTTCTGAATATTATAATCAGAAAGAGTGCGCCCATCTTCG 82938 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| || || || || || |||||||||||||| || || || || ||||| ||||| Sbjct 82937 AGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGGGATTCCCTCTTTGTCTTGG 82878 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| |||| | || || || | || || |||||||| | || ||| Sbjct 82877 ATCTTAGCCTTGACATTTTCGATGGTATCGGAAGGCTCGACCTCAAGAGTTATGGTCTTG 82818 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||||||||| ||||| |||||||| Sbjct 82817 CCAGTTAAAGTTTTAACAAAGATCTGCAT 82789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396244220616489