Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1284 165 4e-36 >seq1284 Length=72753 Score = 165 bits (182), Expect = 4e-36 Identities = 315/462 (68%), Gaps = 8/462 (2%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||||||||| |||||||| | |||||||||||||||||||| || | |||||| Sbjct 53367 CATAAATAAATCAGGAATCCATAAAGCATAAAATAAATCTCTCGCCCTAACTTCTTCAGC 53308 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || ||| ||||||| || ||| ||||||| || ||| | ||||| ||||||||||| Sbjct 53307 CCCAGTATTTTTTTTTAAATTTAAAAAATCAACAACATCCGCATGCCACGGTTCTAAATA 53248 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || ||||| || |||||| || |||||||| || |||| || || | ||| Sbjct 53247 AATTGCAAACGCTCCAGGTCTTTTATTACCCCCTTGATCGACATATCGAGCTGTATTATT 53188 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 ||||| |||||||| ||||| || |||||| || || || | | ||| | | Sbjct 53187 AAAAACCCGTAACATTGGTACTAAACCGTTTGAAATACCATTAGTTCCAGCAATAATCGT 53128 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 ||| | || ||||| || | | || || ||||| || || | |||||| ||| Sbjct 53127 GCCTTGTGCTCGAATATTATGGACGTTAACTCCAATTCCTCCCGCACTTTTTGATATAAT 53068 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 ||||| | ||| | | ||||| |||| || ||| | ||| || ||| Sbjct 53067 AGCACATTGTGAGATACATTTAAAAATGCCTTGGATTGAATCCTCCGGCATCATTACTAA 53008 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 ||||| || || | ||| | ||| ||| ||| |||||| ||||| | || || Sbjct 53007 GAAACATGACGACATTTGTGGGCGAGGTGTCGCTGCGGCAAATAAAGTCGGACTCGCGTG 52948 Query 26353 AGTATAATATCCTTCACTCAAAGCTGTA----TAAGTTTCAA 26390 |||| |||| ||| |||| | |||| |||||||||| Sbjct 52947 AGTAAAATA--CTT--CTCAGACATGTAATTGTAAGTTTCAA 52910 Score = 91.5 bits (100), Expect = 7e-14 Identities = 121/166 (73%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 25016 AATTCTCCAGACAAAACTCTTCT--TATTGATAAGTTTGAAGTGAATGGTTCAAAACATT 25073 || || ||||| | ||||||| ||| ||| || || ||| | ||||||||| ||| Sbjct 54254 AAATCCCCAGAAAGTACTCTTCGCGTATAAATA--TTCGATGTGTAAGGTTCAAAAGATT 54197 Query 25074 CATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAAT 25133 | |||||||||| ||||||| || || |||||||||||| |||| | || |||| Sbjct 54196 CGTTATTTCCTAGAATTTGAGCTGTTGAAGCTGTTGGCATTGGGGCTAAGAGTAAAGAAT 54137 Query 25134 TTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 |||| | || | |||| ||| | || |||||||| | |||||| Sbjct 54136 TTCTTATTCCGTGTTTATTAATTTTTTCTTTTAATTCTTTCCAATC 54091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253018175062775