Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq1284 165 4e-36
>seq1284
Length=72753
Score = 165 bits (182), Expect = 4e-36
Identities = 315/462 (68%), Gaps = 8/462 (2%)
Strand=Plus/Minus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||||||||| |||||||| | |||||||||||||||||||| || | ||||||
Sbjct 53367 CATAAATAAATCAGGAATCCATAAAGCATAAAATAAATCTCTCGCCCTAACTTCTTCAGC 53308
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
|| ||| ||||||| || ||| ||||||| || ||| | ||||| |||||||||||
Sbjct 53307 CCCAGTATTTTTTTTTAAATTTAAAAAATCAACAACATCCGCATGCCACGGTTCTAAATA 53248
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
|| ||||| || |||||| || |||||||| || |||| || || | |||
Sbjct 53247 AATTGCAAACGCTCCAGGTCTTTTATTACCCCCTTGATCGACATATCGAGCTGTATTATT 53188
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172
||||| |||||||| ||||| || |||||| || || || | | ||| | |
Sbjct 53187 AAAAACCCGTAACATTGGTACTAAACCGTTTGAAATACCATTAGTTCCAGCAATAATCGT 53128
Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232
||| | || ||||| || | | || || ||||| || || | |||||| |||
Sbjct 53127 GCCTTGTGCTCGAATATTATGGACGTTAACTCCAATTCCTCCCGCACTTTTTGATATAAT 53068
Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292
||||| | ||| | | ||||| |||| || ||| | ||| || |||
Sbjct 53067 AGCACATTGTGAGATACATTTAAAAATGCCTTGGATTGAATCCTCCGGCATCATTACTAA 53008
Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352
||||| || || | ||| | ||| ||| ||| |||||| ||||| | || ||
Sbjct 53007 GAAACATGACGACATTTGTGGGCGAGGTGTCGCTGCGGCAAATAAAGTCGGACTCGCGTG 52948
Query 26353 AGTATAATATCCTTCACTCAAAGCTGTA----TAAGTTTCAA 26390
|||| |||| ||| |||| | |||| ||||||||||
Sbjct 52947 AGTAAAATA--CTT--CTCAGACATGTAATTGTAAGTTTCAA 52910
Score = 91.5 bits (100), Expect = 7e-14
Identities = 121/166 (73%), Gaps = 4/166 (2%)
Strand=Plus/Minus
Query 25016 AATTCTCCAGACAAAACTCTTCT--TATTGATAAGTTTGAAGTGAATGGTTCAAAACATT 25073
|| || ||||| | ||||||| ||| ||| || || ||| | ||||||||| |||
Sbjct 54254 AAATCCCCAGAAAGTACTCTTCGCGTATAAATA--TTCGATGTGTAAGGTTCAAAAGATT 54197
Query 25074 CATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAAT 25133
| |||||||||| ||||||| || || |||||||||||| |||| | || ||||
Sbjct 54196 CGTTATTTCCTAGAATTTGAGCTGTTGAAGCTGTTGGCATTGGGGCTAAGAGTAAAGAAT 54137
Query 25134 TTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179
|||| | || | |||| ||| | || |||||||| | ||||||
Sbjct 54136 TTCTTATTCCGTGTTTATTAATTTTTTCTTTTAATTCTTTCCAATC 54091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253018175062775
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |