Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq241 145 1e-29 >seq241 Length=949647 Score = 145 bits (160), Expect = 1e-29 Identities = 175/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||||||||| | |||| ||| | || | ||||| || || Sbjct 166286 AATTTGCATTCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTT 166227 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || | || | || ||||||||||| || ||||| ||||||| ||||| Sbjct 166226 GTAATCAGAAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTG 166167 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| |||||||||||||| || ||||| | ||| | |||| ||| ||||| || Sbjct 166166 ATCTGGAGGAATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGA 166107 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | ||||||||| | ||| |||||||| || || | ||||| ||||| || |||||| Sbjct 166106 TGGCTCAACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCATT 166049 Score = 143 bits (158), Expect = 5e-29 Identities = 174/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || |||||||| || | | ||| | ||| | || | ||||| ||| || Sbjct 167653 ATTTGCATTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTG 167594 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | || | | ||| ||||||||||| ||||| || ||||| | |||||| Sbjct 167593 TAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGA 167534 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || |||||||| || ||||| ||||| | ||| | |||| ||| ||||| ||| Sbjct 167533 TCTGGTGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAA 167474 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || |||||||| || || ||||| || |||| |||||||| || ||||||||| Sbjct 167473 GGTTCCACTTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCATT 167417 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||||| | ||||| || | |||| || || ||||| || || Sbjct 167191 ATTCCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCA 167132 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | |||||| ||||| || ||||| | |||||||| ||| Sbjct 167131 GAAAGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGA 167072 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| ||||| || ||||| | ||| | |||| ||| ||||| || | |||| Sbjct 167071 GGAATTCCTTCCTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCA 167012 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||||| ||| |||||||| || || | ||||| ||||| || |||||| Sbjct 167011 ACTTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCATT 166961 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||||| | ||| | ||| | || | ||||| || || ||||| Sbjct 166963 ATTCCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCA 166904 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | |||||| || ||||| ||||| | |||||||| ||| Sbjct 166903 GAAAGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGA 166844 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||||||||| || || || | ||| | |||| ||| ||||| |||| ||| Sbjct 166843 GGAATTCCTTCTTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCA 166784 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | || || |||||||| |||| || || ||||| |||||||| Sbjct 166783 ACTTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734 Score = 132 bits (146), Expect = 9e-26 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||||||||| | ||| | ||| | || | ||||| || || Sbjct 166514 AATTTGCATTCCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTT 166455 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || | || | ||| ||||||||||| || ||||| ||||||| ||||| Sbjct 166454 GTAATCAGAAAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTG 166395 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || |||||||| |||||||| || || | ||| | |||| ||| || ||||| Sbjct 166394 ATCTGGTGGGATTCCTTCCTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGA 166335 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || ||||| | || || |||||||| |||| || || ||||| ||||||||| Sbjct 166334 TGGTTCGACTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166277 Score = 123 bits (136), Expect = 4e-23 Identities = 170/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||| ||||| | || | ||| | || | ||||| || || Sbjct 166742 AATTTGCATACCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTT 166683 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | || | ||| || | |||||| ||||| || ||||| | ||||| Sbjct 166682 ATAATCCGAAAGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTG 166623 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || || ||||||||||| || ||||| | ||| | ||| ||||||||| || Sbjct 166622 GTCTGGTGGGATCCCTTCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGA 166563 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || ||||| | || || |||||||| |||| || || ||||| ||||||||| Sbjct 166562 AGGTTCGACTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166505 Score = 120 bits (132), Expect = 5e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||||| | ||||| ||| | || | || || ||||| || || Sbjct 166051 ATTCCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCA 165992 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || ||||||||||| ||||| || || | |||||||| || Sbjct 165991 GAAAGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGT 165932 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| |||||||| || || | ||| | |||| || || ||||| | |||| Sbjct 165931 GGGATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCA 165872 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| | || ||||| || || || | ||||| || || || |||||| Sbjct 165871 ACTTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCATT 165821 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| ||||||| | ||||| || | || | || || ||||| || ||| Sbjct 165823 ATTCCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCG 165764 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| |||||||||||||||||||| || || | ||||| || || Sbjct 165763 GAAAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGT 165704 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| || || ||||| | || | |||| |||||| || || | ||| Sbjct 165703 GGGATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCG 165644 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||| || || |||||||| || | ||||| || || || ||||| Sbjct 165643 ACCTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899574814322640