Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq241 145 1e-29
>seq241
Length=949647
Score = 145 bits (160), Expect = 1e-29
Identities = 175/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| || || |||||||||| | |||| ||| | || | ||||| || ||
Sbjct 166286 AATTTGCATTCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTT 166227
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|| || || | || | || ||||||||||| || ||||| ||||||| |||||
Sbjct 166226 GTAATCAGAAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTG 166167
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| |||||||||||||| || ||||| | ||| | |||| ||| ||||| ||
Sbjct 166166 ATCTGGAGGAATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGA 166107
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
| ||||||||| | ||| |||||||| || || | ||||| ||||| || ||||||
Sbjct 166106 TGGCTCAACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCATT 166049
Score = 143 bits (158), Expect = 5e-29
Identities = 174/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| || |||||||| || | | ||| | ||| | || | ||||| ||| ||
Sbjct 167653 ATTTGCATTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTG 167594
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|| || || | || | | ||| ||||||||||| ||||| || ||||| | ||||||
Sbjct 167593 TAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGA 167534
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || |||||||| || ||||| ||||| | ||| | |||| ||| ||||| |||
Sbjct 167533 TCTGGTGGGATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAA 167474
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
| || |||||||| || || ||||| || |||| |||||||| || |||||||||
Sbjct 167473 GGTTCCACTTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCATT 167417
Score = 141 bits (156), Expect = 2e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| ||||||||||||| | ||||| || | |||| || || ||||| || ||
Sbjct 167191 ATTCCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCA 167132
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | |||||| ||||| || ||||| | |||||||| |||
Sbjct 167131 GAAAGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGA 167072
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| ||||| || ||||| | ||| | |||| ||| ||||| || | ||||
Sbjct 167071 GGAATTCCTTCCTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCA 167012
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||||| ||| |||||||| || || | ||||| ||||| || ||||||
Sbjct 167011 ACTTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCATT 166961
Score = 136 bits (150), Expect = 7e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| ||||||||||||| | ||| | ||| | || | ||||| || || |||||
Sbjct 166963 ATTCCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCA 166904
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | |||||| || ||||| ||||| | |||||||| |||
Sbjct 166903 GAAAGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGA 166844
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||||||||| || || || | ||| | |||| ||| ||||| |||| |||
Sbjct 166843 GGAATTCCTTCTTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCA 166784
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | || || |||||||| |||| || || ||||| ||||||||
Sbjct 166783 ACTTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734
Score = 132 bits (146), Expect = 9e-26
Identities = 172/238 (72%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| || || |||||||||| | ||| | ||| | || | ||||| || ||
Sbjct 166514 AATTTGCATTCCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTT 166455
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|| || || | || | ||| ||||||||||| || ||||| ||||||| |||||
Sbjct 166454 GTAATCAGAAAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTG 166395
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || |||||||| |||||||| || || | ||| | |||| ||| || |||||
Sbjct 166394 ATCTGGTGGGATTCCTTCCTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGA 166335
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
| || ||||| | || || |||||||| |||| || || ||||| |||||||||
Sbjct 166334 TGGTTCGACTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166277
Score = 123 bits (136), Expect = 4e-23
Identities = 170/238 (71%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||| ||||| | || | ||| | || | ||||| || ||
Sbjct 166742 AATTTGCATACCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTT 166683
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||| || || | || | ||| || | |||||| ||||| || ||||| | |||||
Sbjct 166682 ATAATCCGAAAGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTG 166623
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
|| || || || ||||||||||| || ||||| | ||| | ||| ||||||||| ||
Sbjct 166622 GTCTGGTGGGATCCCTTCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGA 166563
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
|| || ||||| | || || |||||||| |||| || || ||||| |||||||||
Sbjct 166562 AGGTTCGACTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166505
Score = 120 bits (132), Expect = 5e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| ||||||||||||| | ||||| ||| | || | || || ||||| || ||
Sbjct 166051 ATTCCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCA 165992
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || ||||||||||| ||||| || || | |||||||| ||
Sbjct 165991 GAAAGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGT 165932
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| |||||||| || || | ||| | |||| || || ||||| | ||||
Sbjct 165931 GGGATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCA 165872
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| | || ||||| || || || | ||||| || || || ||||||
Sbjct 165871 ACTTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCATT 165821
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| ||||| ||||||| | ||||| || | || | || || ||||| || |||
Sbjct 165823 ATTCCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCG 165764
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| |||||||||||||||||||| || || | ||||| || ||
Sbjct 165763 GAAAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGT 165704
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || ||||| || || ||||| | || | |||| |||||| || || | |||
Sbjct 165703 GGGATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCG 165644
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||| || || |||||||| || | ||||| || || || |||||
Sbjct 165643 ACCTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899574814322640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |