Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2316 123 3e-22 >seq2316 Length=5934 Score = 123 bits (136), Expect = 3e-22 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 1254350 CAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTT 1254409 ||| || ||| | | |||||||| || || | |||||| ||||| | ||| | |||||| Sbjct 2701 CAGCTCTCCGGGAAGAATCAGGCGAACAGCCGACTGGATTTCGCGAGAGCCCAGCGTGTT 2760 Query 1254410 GCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTT 1254469 |||| | |||| |||||| |||||| | | || |||| |||||||| Sbjct 2761 CTTCTTGCTGTAGTGGCACAGACGCGACGCCTCGACGGCAATCTTCTCGAAGATGTCGTT 2820 Query 1254470 GACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1254529 || ||||||||||||| |||||| | |||| ||||| ||| ||||||||||||||| Sbjct 2821 CACGAACGAGTTCATGATCGACATGGCCTTGGAGGAGACGCCAGTGTCGGGGTGCACCTG 2880 Query 1254530 CTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 ||| ||||| ||||||| | | ||||| || Sbjct 2881 CTTCAGCACACGGTAGATGTAGGTGGAGTAGGA 2913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106558428238409