Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq295 96.9 4e-15
seq236 86.0 8e-12
>seq295
Length=373786
Score = 96.9 bits (106), Expect = 4e-15
Identities = 288/438 (66%), Gaps = 25/438 (6%)
Strand=Plus/Plus
Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTA--AATGATATAGG 172456
|||||||||||||| | |||| ||| || | | ||| | ||| || || | | |
Sbjct 5331 AAGAACTTTTATGGTTCATTAGAGGGAGTACCAACGCTAAAGATTTAGCAAAGAAAAATG 5390
Query 172457 TGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGA 172516
|| || |||||||| || | | | |||| |||||| | | || || |||||
Sbjct 5391 TG--AATATTTGGAATCCCAACAGCACCAGGGAATATTTAGACTCAATTGGTTTAACTGA 5448
Query 172517 AAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCA 172576
| ||||||| ||||| || || |||||||| ||||||||||||||| || ||| |
Sbjct 5449 TCGTGAAGAAGGCGATTTGGGACCTATTTATGGTTTTCAATGGAGACATTATGGAGCTGA 5508
Query 172577 ATATATCGACTGTG-ATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTA 172635
|||| | | || | || ||||| || |||| | || ||||||| | ||
Sbjct 5509 ATAT-GGTAATATGCACACTGATTATACTAATAAAGGTATTGATCAATTAATGGATGTTA 5567
Query 172636 TTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTAC 172695
|||||||| | |||| || ||| | ||||||| | || | ||||| ||
Sbjct 5568 TTAATACTATTAAAAATAAACCAACTGATCGAAGGATAATTATGTGTGCTTGGA----AC 5623
Query 172696 CTCAACTTGA------TAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATG 172749
| || |||| |||||||| | |||||||| ||| ||||| ||||||||||
Sbjct 5624 CCCA--TTGATATCCCTAAAATGGCATTACCTCCTTGTCATTGTTTAGTTCAATTTTATG 5681
Query 172750 T--CAGaaaaaaaTCAATCTTAGATTGTCAGTTATATCAAAGATCAGCTGATTTAGGATT 172807
| | ||| | | | || |||| ||||||||| | ||||| ||| | || |
Sbjct 5682 TAGCCGAAGGAGAACTTTC-----TTGTTTATTATATCAACGTTCAGCGGATATGGGTCT 5736
Query 172808 GGGGGTACCTTATAATAT 172825
|| || |||| ||||||
Sbjct 5737 TGGAGTTCCTTTTAATAT 5754
>seq236
Length=660955
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 116815 TAGTaaaaaaaaTGCTGTTATTATGGGTCGAAAAACATGGGATAGTATTCCTAATAAATT 116874
|| ||| ||||||| |||||| |||||||||||||| |||||||||||||| |||||
Sbjct 652593 TAATAAGAAAAATGTTGTTATCATGGGTCGAAAAACTTGGGATAGTATTCCACCTAAATA 652652
Query 116875 TAAACCATTaaaaaa 116889
||||||||||| ||
Sbjct 652653 CAAACCATTAAATAA 652667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632433648388760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |