Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq569 98.7 6e-16
seq412 91.5 1e-13
seq241 89.7 3e-13
>seq569
Length=200630
Score = 98.7 bits (108), Expect = 6e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||||| || ||||| |||||||| ||||| || || |||| |||| |||
Sbjct 134601 ACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGTCCATCTTCC 134542
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
||||| || || |||||||| | ||||| || ||| | || | ||||||||||| |
Sbjct 134541 AGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCCTCCTTGTCTTGG 134482
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
|||||| ||||| | | || | || || || || || | ||| ||||| ||
Sbjct 134481 ATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGGGTGATGGTTTTA 134422
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||| || || || || |||||
Sbjct 134421 CCGGTTAGGGTTTTCACGAAAATTTGCAT 134393
>seq412
Length=275653
Score = 91.5 bits (100), Expect = 1e-13
Identities = 164/237 (69%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809
|| || | ||| || ||||| | || || | || | || |||||||| ||||| || ||
Sbjct 83015 CCACCACGCAATCTTAGGACTAAATGCAACGTTGAT-TCTTTCTGAATATTATAATCAGA 82957
Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869
|| ||||| |||| || ||||| ||||| ||||| || | || || || || | ||
Sbjct 82956 AAGAGTGCGCCCATCTTCGAGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGG 82897
Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929
| ||||| ||||| | || || ||||| | | || | || | ||||||
Sbjct 82896 GATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATTTTCGATGGTATCGGAAGGCTCGAC 82837
Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGGA 34986
|||| ||||||||||| || || | || || |||||||||||||| | |||||
Sbjct 82836 CTCAAGAGTTATGGTCTTGCCAGTTAAAGTTTTAACAAAGATCTGCATATTTGTGGA 82780
>seq241
Length=949647
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || | ||| |||| || | || | |||| || || || |||||||| |||||
Sbjct 166732 CCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAA 166673
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | || |||| || ||||| || ||||||||||| | ||||| |||||| | ||
Sbjct 166672 AGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGG 166613
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||| || || || | ||||| ||| ||| | | || | ||| | |||||
Sbjct 166612 ATCCCTTCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACT 166553
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || ||||| || || || | |||||| ||||| || |||||
Sbjct 166552 TCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || ||||| |||| |||| ||| | || ||||| || || || || || |
Sbjct 167190 TTCCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAG 167131
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| || ||||| |||| || ||||| || ||||||||||| | ||||| || ||| | |
Sbjct 167130 AAAGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAG 167071
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | || ||||| || | ||||| ||| || | | || | ||| | ||| |
Sbjct 167070 GAATTCCTTCCTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAA 167011
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || || || ||||| || | || || ||||| ||||||||
Sbjct 167010 CTTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || || ||||||| || | || | ||| || || || ||||| || || |
Sbjct 167418 TTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAG 167359
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| || | || |||| || ||||| || ||||||||||||| ||||| || ||| | |
Sbjct 167358 AAAGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTG 167299
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926
| | || |||||||| | ||||| ||| || || || || | ||| | |||
Sbjct 167298 GGATTCCTTCCTTGTCTTGGATTTTAGCTTTAAC--ATTCTCAATGGTATCAGATGGCTC 167241
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | || || || ||||| || | || || ||||||||||||||
Sbjct 167240 AACTTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325664708690663
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