Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq241 165 1e-35 seq412 104 4e-17 seq62 100 4e-16 >seq241 Length=949647 Score = 165 bits (182), Expect = 1e-35 Identities = 172/226 (76%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| ||||||||||||| |||||||| || || | || || |||| | | Sbjct 167419 TGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTCTG 167478 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| |||||| ||| || ||||| || ||||| ||||||| Sbjct 167479 ATACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAAC 167538 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || |||||||||||||| ||| | | || | | ||||| || | Sbjct 167539 AACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAACA 167598 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || ||||||||||||| | |||||||| || Sbjct 167599 TTCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGG 167644 Score = 150 bits (166), Expect = 3e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| ||||||||||||| |||||||| || || | || || |||| | | Sbjct 167647 TGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTCTG 167706 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| ||| |||||| ||| || ||||| || ||||| ||||||| Sbjct 167707 ATACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAAC 167766 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | ||||| || ||||||||||| || ||| | || | ||||||| |||| Sbjct 167767 AGCGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAATA 167826 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||| ||||| ||| | |||||||| Sbjct 167827 TCCAAAAGGAATCCACTCTGCATTTAGT 167854 Score = 147 bits (162), Expect = 3e-30 Identities = 168/226 (74%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | |||||||| || |||||||| |||||| | || || || | | Sbjct 166051 TGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATCTG 166110 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| |||||| || ||||||||| ||||| || ||||||| Sbjct 166111 ATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCAAC 166170 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || || | || ||||| |||||||||||||| || | || | | ||||| || | Sbjct 166171 AACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAACA 166230 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || ||||||| || || |||| |||||||| Sbjct 166231 TCCAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGAGGAGG 166276 Score = 138 bits (152), Expect = 2e-27 Identities = 166/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || ||||| || ||||| || || | || || |||| || Sbjct 166279 TGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATCCG 166338 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| ||| || ||| ||| ||||| || ||||| ||||||| Sbjct 166339 ACACCATTGAAAATGTTAAAGCTAAGATCCAAGATAAGGAAGGAATCCCACCAGATCAAC 166398 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || || | || ||||| |||||||||||||| ||| | || | | ||||| || | Sbjct 166399 AACGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTACAACA 166458 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || |||||||| || | ||||||||||| |||| |||||||| Sbjct 166459 TCCAGAAAGAATCCACCCTTCATTTAGTATTGAGATTGAGAGGAGG 166504 Score = 132 bits (146), Expect = 8e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || ||||| || ||||| || || | || || |||| | | Sbjct 166735 TGCAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCTG 166794 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||| || || ||||||||| ||||| || ||||||| Sbjct 166795 ATACAATTGAAAATGTTAAAGCTAAGATCCAGGATAAAGAAGGAATTCCTCCAGATCAAC 166854 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||| | || ||| | || | | || || || | Sbjct 166855 AACGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAACA 166914 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| ||| ||||||||||||| |||| ||||| || Sbjct 166915 TCCAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGAGGTGG 166960 Score = 127 bits (140), Expect = 3e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || ||||| || ||||| || || | || || |||| | | Sbjct 166507 TGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTCTG 166566 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||| || ||| |||||| || ||||||||| || ||||| || |||| Sbjct 166567 ATACTATTGAAAACGTTAAAGCTAAAATCCAGGATAAAGAAGGGATCCCACCAGACCAAC 166626 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || ||||||||| | || ||| | || | | |||||||| | Sbjct 166627 AACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATAACA 166686 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || |||||||||| || |||| |||| |||| Sbjct 166687 TCCAAAAAGAATCCACCCTCCATTTAGTGTTGAGATTGCGAGGTGGTA 166734 Score = 123 bits (136), Expect = 4e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || || |||||||| ||||| | || || || | | Sbjct 167191 TGCAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATCTG 167250 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| |||||| ||| || ||||| || ||||| ||||||| Sbjct 167251 ATACCATTGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAAC 167310 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || ||||||||| | || ||| | | || | | ||||| || | Sbjct 167311 AACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACA 167370 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || ||||||||||||| | |||||||| || Sbjct 167371 TCCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGG 167416 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| || || || ||||| || || | || || || | | Sbjct 165595 TGCAGATTTTCGTGAAAACCTTGACTGGTAAAACCATCACGTTAGAGGTCGAGCCATCTG 165654 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| || ||||| || ||||| || || ||||| || |||| Sbjct 165655 ACACTATTGAAAATGTGAAGGCGAAAATCCAGGACAAAGAGGGGATCCCACCAGACCAAC 165714 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| || ||||||||||| ||| | || | | ||||| |||| Sbjct 165715 AACGGTTGATCTTTGCCGGAAAACAATTAGAAGATGGACGTACCCTTTCCGATTACAATA 165774 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| ||||| ||| |||| || ||||| |||| || || || Sbjct 165775 TCCAAAAGGAATCAACTCTCCACTTGGTATTGAGATTGAGGGGTGG 165820 >seq412 Length=275653 Score = 104 bits (114), Expect = 4e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| ||||| || || || || ||| |||| || || | | || Sbjct 82790 TGCAGATCTTTGTTAAAACTTTAACTGGCAAGACCATAACTCTTGAGGTCGAGCCTTCCG 82849 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || ||| || ||| ||||| || || ||||| ||||||| Sbjct 82850 ATACCATCGAAAATGTCAAGGCTAAGATCCAAGACAAAGAGGGAATCCCACCGGATCAAC 82909 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | ||||| || || |||||| | || ||| | || | | |||||||||| Sbjct 82910 AGCGTTTAATTTTCGCGGGAAAACAACTCGAAGATGGGCGCACTCTTTCTGATTATAATA 82969 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATT 146248 | || |||||||| || | |||||||| || |||| Sbjct 82970 TTCAGAAAGAATCAACGTTGCATTTAGTCCTAAGATT 83006 >seq62 Length=648032 Score = 100 bits (110), Expect = 4e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 146037 ATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACT 146096 || ||| ||||||| ||||| ||| ||| || || | | || |||| | ||||| Sbjct 445319 ATCTTCGTAAAAACTTTAACTGGAGAAATCATCACCTTAGGAGTGGAACCTTCTGATACC 445378 Query 146097 ATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGA 146156 ||| ||||||| ||| |||||| ||| || ||||| || ||||| ||| ||||| | Sbjct 445379 ATTGAAAATGTTAAAGCTAAAATCCAAGATACGGAAGGAATCCCACCAGATGAACAACGT 445438 Query 146157 CTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAA 146216 | || || | ||||||||| | || ||| | | || | | ||||| || || ||| Sbjct 445439 TTAATCTTCTCTGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACATTCAA 445498 Query 146217 AAAGAATCGACTATCCATTTAGTATTACGA 146246 |||||||| || |||| || ||| || || Sbjct 445499 AAAGAATCAACCCTCCAGTTGGTAATAAGA 445528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786096853754840