Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq241 165 1e-35
seq412 104 4e-17
seq62 100 4e-16
>seq241
Length=949647
Score = 165 bits (182), Expect = 1e-35
Identities = 172/226 (76%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| ||||||||||||| |||||||| || || | || || |||| | |
Sbjct 167419 TGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTCTG 167478
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| ||||||| ||| |||||| ||| || ||||| || ||||| |||||||
Sbjct 167479 ATACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAAC 167538
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || || || |||||||||||||| ||| | | || | | ||||| || |
Sbjct 167539 AACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAACA 167598
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||||||||| || ||||||||||||| | |||||||| ||
Sbjct 167599 TTCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGG 167644
Score = 150 bits (166), Expect = 3e-31
Identities = 158/208 (76%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| ||||||||||||| |||||||| || || | || || |||| | |
Sbjct 167647 TGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTCTG 167706
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| ||||||| ||| |||||| ||| || ||||| || ||||| |||||||
Sbjct 167707 ATACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAAC 167766
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | | ||||| || ||||||||||| || ||| | || | ||||||| ||||
Sbjct 167767 AGCGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAATA 167826
Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239
| ||||| ||||| ||| | ||||||||
Sbjct 167827 TCCAAAAGGAATCCACTCTGCATTTAGT 167854
Score = 147 bits (162), Expect = 3e-30
Identities = 168/226 (74%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | |||||||| || |||||||| |||||| | || || || | |
Sbjct 166051 TGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATCTG 166110
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| ||||||| ||| |||||| || ||||||||| ||||| || |||||||
Sbjct 166111 ATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCAAC 166170
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| || | || ||||| |||||||||||||| || | || | | ||||| || |
Sbjct 166171 AACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAACA 166230
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||||||||| || ||||||| || || |||| ||||||||
Sbjct 166231 TCCAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGAGGAGG 166276
Score = 138 bits (152), Expect = 2e-27
Identities = 166/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || ||||| || ||||| || || | || || |||| ||
Sbjct 166279 TGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATCCG 166338
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| ||||||| ||| ||| || ||| ||| ||||| || ||||| |||||||
Sbjct 166339 ACACCATTGAAAATGTTAAAGCTAAGATCCAAGATAAGGAAGGAATCCCACCAGATCAAC 166398
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| || | || ||||| |||||||||||||| ||| | || | | ||||| || |
Sbjct 166399 AACGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTACAACA 166458
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || |||||||| || | ||||||||||| |||| ||||||||
Sbjct 166459 TCCAGAAAGAATCCACCCTTCATTTAGTATTGAGATTGAGAGGAGG 166504
Score = 132 bits (146), Expect = 8e-26
Identities = 165/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || ||||| || ||||| || || | || || |||| | |
Sbjct 166735 TGCAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCTG 166794
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| ||||||| ||| ||| || || ||||||||| ||||| || |||||||
Sbjct 166795 ATACAATTGAAAATGTTAAAGCTAAGATCCAGGATAAAGAAGGAATTCCTCCAGATCAAC 166854
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || ||||| ||||||||| | || ||| | || | | || || || |
Sbjct 166855 AACGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAACA 166914
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||||||||| ||| ||||||||||||| |||| ||||| ||
Sbjct 166915 TCCAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGAGGTGG 166960
Score = 127 bits (140), Expect = 3e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || ||||| || ||||| || || | || || |||| | |
Sbjct 166507 TGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTCTG 166566
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| |||| || ||| |||||| || ||||||||| || ||||| || ||||
Sbjct 166567 ATACTATTGAAAACGTTAAAGCTAAAATCCAGGATAAAGAAGGGATCCCACCAGACCAAC 166626
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || || || ||||||||| | || ||| | || | | |||||||| |
Sbjct 166627 AACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATAACA 166686
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| || |||||||||| || |||| |||| ||||
Sbjct 166687 TCCAAAAAGAATCCACCCTCCATTTAGTGTTGAGATTGCGAGGTGGTA 166734
Score = 123 bits (136), Expect = 4e-23
Identities = 163/226 (72%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| || || |||||||| ||||| | || || || | |
Sbjct 167191 TGCAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATCTG 167250
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | ||||| ||| |||||| ||| || ||||| || ||||| |||||||
Sbjct 167251 ATACCATTGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAAC 167310
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || || || ||||||||| | || ||| | | || | | ||||| || |
Sbjct 167311 AACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACA 167370
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||||||||| || ||||||||||||| | |||||||| ||
Sbjct 167371 TCCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGG 167416
Score = 102 bits (112), Expect = 1e-16
Identities = 158/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | ||||| || || || ||||| || || | || || || | |
Sbjct 165595 TGCAGATTTTCGTGAAAACCTTGACTGGTAAAACCATCACGTTAGAGGTCGAGCCATCTG 165654
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| ||||||| || ||||| || ||||| || || ||||| || ||||
Sbjct 165655 ACACTATTGAAAATGTGAAGGCGAAAATCCAGGACAAAGAGGGGATCCCACCAGACCAAC 165714
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || ||||| || ||||||||||| ||| | || | | ||||| ||||
Sbjct 165715 AACGGTTGATCTTTGCCGGAAAACAATTAGAAGATGGACGTACCCTTTCCGATTACAATA 165774
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||| ||||| ||| |||| || ||||| |||| || || ||
Sbjct 165775 TCCAAAAGGAATCAACTCTCCACTTGGTATTGAGATTGAGGGGTGG 165820
>seq412
Length=275653
Score = 104 bits (114), Expect = 4e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| ||||| || || || || ||| |||| || || | | ||
Sbjct 82790 TGCAGATCTTTGTTAAAACTTTAACTGGCAAGACCATAACTCTTGAGGTCGAGCCTTCCG 82849
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || ||||||| || ||| || ||| ||||| || || ||||| |||||||
Sbjct 82850 ATACCATCGAAAATGTCAAGGCTAAGATCCAAGACAAAGAGGGAATCCCACCGGATCAAC 82909
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | | ||||| || || |||||| | || ||| | || | | ||||||||||
Sbjct 82910 AGCGTTTAATTTTCGCGGGAAAACAACTCGAAGATGGGCGCACTCTTTCTGATTATAATA 82969
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATT 146248
| || |||||||| || | |||||||| || ||||
Sbjct 82970 TTCAGAAAGAATCAACGTTGCATTTAGTCCTAAGATT 83006
>seq62
Length=648032
Score = 100 bits (110), Expect = 4e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 146037 ATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACT 146096
|| ||| ||||||| ||||| ||| ||| || || | | || |||| | |||||
Sbjct 445319 ATCTTCGTAAAAACTTTAACTGGAGAAATCATCACCTTAGGAGTGGAACCTTCTGATACC 445378
Query 146097 ATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGA 146156
||| ||||||| ||| |||||| ||| || ||||| || ||||| ||| ||||| |
Sbjct 445379 ATTGAAAATGTTAAAGCTAAAATCCAAGATACGGAAGGAATCCCACCAGATGAACAACGT 445438
Query 146157 CTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAA 146216
| || || | ||||||||| | || ||| | | || | | ||||| || || |||
Sbjct 445439 TTAATCTTCTCTGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACATTCAA 445498
Query 146217 AAAGAATCGACTATCCATTTAGTATTACGA 146246
|||||||| || |||| || ||| || ||
Sbjct 445499 AAAGAATCAACCCTCCAGTTGGTAATAAGA 445528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786096853754840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |