Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq241 165 6e-36
seq412 163 2e-35
seq569 152 4e-32
seq62 105 5e-18
>seq241
Length=949647
Score = 165 bits (182), Expect = 6e-36
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
|||||| ||||| | || ||||||||| || || ||||||||||| ||||| ||||| |
Sbjct 166277 TCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGA 166218
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| ||||| || || | |||||| |||||| | || |||| ||| ||||| || ||
Sbjct 166217 AAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGG 166158
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||| || ||||| || || | ||| ||| ||| |||| | || ||||| | || ||
Sbjct 166157 AATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAAC 166098
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | ||| |||||||| ||||| || ||||| ||||| |||||||||
Sbjct 166097 TTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCATT 166049
Score = 156 bits (172), Expect = 3e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
|||||| ||||| | || || |||||||| ||||||||||| || ||||| ||||| |
Sbjct 166505 TCCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGA 166446
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| ||||| ||| || | |||||| |||||| | || |||| ||| ||||| || ||
Sbjct 166445 AAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGG 166386
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || || ||||| | || ||| ||| |||| | ||||| || |||| ||
Sbjct 166385 GATTCCTTCCTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGAC 166326
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | || || ||||| ||||||||||| |||||||| || ||||||
Sbjct 166325 TTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166277
Score = 150 bits (166), Expect = 1e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | ||| | || ||| ||||| || |||||||||||||| ||||||||||||| |
Sbjct 166732 CCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAA 166673
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| || |||||||| || || | || || | ||| || || || ||
Sbjct 166672 AGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGG 166613
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||| || || | ||| ||| || |||| | ||| |||||| |||| |||
Sbjct 166612 ATCCCTTCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACT 166553
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| | || || ||||| ||||||||||| |||||||| || ||||||
Sbjct 166552 TCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166505
Score = 143 bits (158), Expect = 2e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || || || | || || ||||| || || ||||||||||||||||| ||||| |
Sbjct 167645 TCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGA 167586
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || ||| ||| || | |||||| || || | || || | ||| ||||| || ||
Sbjct 167585 AAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGG 167526
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || |||||||| | ||| ||| ||| |||| | || |||||| |||| ||
Sbjct 167525 GATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCAC 167466
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| || || || ||||| |||||||| ||||| || || || ||||||
Sbjct 167465 TTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCATT 167417
Score = 141 bits (156), Expect = 7e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || ||||| | || || ||||| || || ||||||||||| ||||| || || |
Sbjct 166961 TCCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGA 166902
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || || ||| || |||||||| |||||| | || || | ||| ||||| || ||
Sbjct 166901 AAGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGG 166842
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||| || ||||| || || | || ||| ||| |||| | || |||||| |||| ||
Sbjct 166841 AATTCCTTCTTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAAC 166782
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | || || ||||| || |||||||| |||||||| || |||||
Sbjct 166781 TTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734
Score = 138 bits (152), Expect = 9e-28
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || ||||| | || ||||||||||| || ||||| ||||| || || ||||| |
Sbjct 166049 TCCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGA 165990
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || || ||| || | |||||| |||||| | ||||| | ||| ||||| || ||
Sbjct 165989 AAGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGG 165930
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737
|| || || || ||||| ||| || | ||| ||| |||||| ||||| || | || |
Sbjct 165929 GATTCCTTCCTTATCTTG-AATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAA 165871
Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|||| | || ||||| || ||||| || ||||| || || |||||||||
Sbjct 165870 CTTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCATT 165821
Score = 138 bits (152), Expect = 9e-28
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || || || | || || ||||| || || ||||||||||| ||||| ||||| |
Sbjct 167417 TCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGA 167358
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || ||| ||| || |||||||| || || | ||||| | ||| ||||| || ||
Sbjct 167357 AAGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGG 167298
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || |||||||| | ||| ||| ||| | || | || ||||| | || ||
Sbjct 167297 GATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCAAC 167238
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | || |||||||| ||||| || ||||| ||||| |||||||||
Sbjct 167237 TTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCATT 167189
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| |||||||| | || ||||| || || || ||||| ||||| || || ||||| |
Sbjct 165821 TCCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGA 165762
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| ||| || ||| || | |||||| || ||| | ||||| | ||| || || || ||
Sbjct 165761 AAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGG 165702
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||||||||| || | ||| || ||| |||| | ||||||||| | || ||
Sbjct 165701 GATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGAC 165642
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || || ||||| ||||| |||||||| || || ||||||||
Sbjct 165641 CTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594
>seq412
Length=275653
Score = 163 bits (180), Expect = 2e-35
Identities = 165/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| || ||||| | ||| |||||||| ||||| |||||||| | || ||||| |||
Sbjct 83000 AGGACTAAATGCAACGTTGATTCTTTCTGAATATTATAATCAGAAAGAGTGCGCCCATCT 82941
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
||||||||||| || || | || || | || |||||||| || || ||||||||||||
Sbjct 82940 TCGAGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGGGATTCCCTCTTTGTCT 82881
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || |||||| |||| | || || ||| | || || ||||||||||| ||
Sbjct 82880 TGGATCTTAGCCTTGACATTTTCGATGGTATCGGAAGGCTCGACCTCAAGAGTTATGGTC 82821
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||||||||||| ||||||||||| |||||||| ||
Sbjct 82820 TTGCCAGTTAAAGTTTTAACAAAGATCTGCATATT 82786
>seq569
Length=200630
Score = 152 bits (168), Expect = 4e-32
Identities = 164/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||||| |||||| |||||||| ||||| ||||||||||| || || | || |||||
Sbjct 134608 ACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGTCC 134549
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || |||||||| ||||| | || || | ||| ||||| || || |||||||| ||
Sbjct 134548 ATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCCTCCTT 134489
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|||||| | |||| |||||| |||| | || || || |||| || || || || ||
Sbjct 134488 GTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGGGTGAT 134429
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||||| || |||| |||||| || || || ||||||
Sbjct 134428 GGTTTTACCGGTTAGGGTTTTCACGAAAATTTGCATT 134392
>seq62
Length=648032
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
||||| || || || ||||||||||||||||| ||||| | || || ||| ||| ||
Sbjct 445521 ACCAACTGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCA 445462
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
|||||||| |||| | || || | ||| | ||| || || || || || | |||||
Sbjct 445461 AGTTGTTTACCAGAGAAGATTAAACGTTGTTCATCTGGTGGGATTCCTTCCGTATCTTGG 445402
Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757
| ||| ||| ||| |||| | || |||||| |||| ||| | | || || |||
Sbjct 445401 ATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTCCTAAGGTGATGATTTCT 445342
Query 29758 CCAGTTAAGGTTTTAACAAATAT 29780
|||||||| ||||| || || ||
Sbjct 445341 CCAGTTAAAGTTTTTACGAAGAT 445319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385185974482857
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