Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq8 95.1 2e-14 seq295 93.3 6e-14 seq236 89.7 7e-13 >seq8 Length=4764940 Score = 95.1 bits (104), Expect = 2e-14 Identities = 128/174 (74%), Gaps = 6/174 (3%) Strand=Plus/Plus Query 201075 TTAAATTATCCTCAAAAACCACTTGTTACAACTGACATTGCA--GAAT-TTAATGGTCTA 201131 ||| |||| || || ||||||||||||||||| || || | |||| || | | | | Sbjct 3177604 TTATATTACCCCCATAAACCACTTGTTACAAC--ACGTTCGATGGAATATTTACGATTCA 3177661 Query 201132 AATGAATACCCCAATGGTATTAATGCAATTGTAGCAATTGCATGTTACACTGGATACAAT 201191 | |||| ||| ||| |||||| || ||||||||| ||| ||||| || || ||| Sbjct 3177662 GA-GAATTACCCGCTGGGATTAATAGCATCGTAGCAATTTTATGCTACACCGGGTATAAT 3177720 Query 201192 CAAGAAGATAGTGTTATTCTTAATAAAGCATCTATTGAAAGAGGTTTATTCGGT 201245 ||||||||| |||||| | ||| | || || ||||||||||||| ||| || Sbjct 3177721 CAAGAAGATTCCGTTATTTTAAATGCATCAGCTGTTGAAAGAGGTTTTTTCCGT 3177774 >seq295 Length=373786 Score = 93.3 bits (102), Expect = 6e-14 Identities = 165/235 (70%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 180549 AAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATA 180608 ||||||| ||||| ||||| |||||||| ||||||||||||||| |||||| ||||| Sbjct 5454 AAGAAGGCGATTTGGGACCTATTTATGGTTTTCAATGGAGACATTATGGAGCTGAATATG 5513 Query 180609 TTGACTGTG-ATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAA 180667 | | | || | || | |||| ||||||| || ||||||| | ||||| | Sbjct 5514 GT-AATATGCACACTGATTATACTAATAAAGGTATTGATCAATTAATGGATGTTATTAAT 5572 Query 180668 ACTATAAAAAATAATCCCGAATG-CCGAAGAATAATCATAGATAGTTGGAATGTATCACA 180726 ||||| |||||||| || | || ||||| ||||| || | ||||| | | || Sbjct 5573 ACTATTAAAAATAA-ACCAACTGATCGAAGGATAATTATGTGTGCTTGGA----ACCCCA 5627 Query 180727 AT----TACCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGT 180777 | | || | ||||| | || || ||||| ||||| || ||||||||||| Sbjct 5628 TTGATATCCCTAAAATGGCATTACCTCCTTGTCATTGTTTAGTTCAATTTTATGT 5682 >seq236 Length=660955 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 122077 TaaaaaaaaTGCTGTTATTATGGGTCGAAAAACTTGGGATAGTATTCCTGATAAATTTAA 122136 ||| ||||||| |||||| ||||||||||||||||||||||||||||| ||||| || Sbjct 652596 TAAGAAAAATGTTGTTATCATGGGTCGAAAAACTTGGGATAGTATTCCACCTAAATACAA 652655 Query 122137 ACCATTaaaaaa 122148 ||||||||| || Sbjct 652656 ACCATTAAATAA 652667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655222032293000