Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq8 95.1 2e-14
seq295 93.3 6e-14
seq236 89.7 7e-13
>seq8
Length=4764940
Score = 95.1 bits (104), Expect = 2e-14
Identities = 128/174 (74%), Gaps = 6/174 (3%)
Strand=Plus/Plus
Query 201075 TTAAATTATCCTCAAAAACCACTTGTTACAACTGACATTGCA--GAAT-TTAATGGTCTA 201131
||| |||| || || ||||||||||||||||| || || | |||| || | | | |
Sbjct 3177604 TTATATTACCCCCATAAACCACTTGTTACAAC--ACGTTCGATGGAATATTTACGATTCA 3177661
Query 201132 AATGAATACCCCAATGGTATTAATGCAATTGTAGCAATTGCATGTTACACTGGATACAAT 201191
| |||| ||| ||| |||||| || ||||||||| ||| ||||| || || |||
Sbjct 3177662 GA-GAATTACCCGCTGGGATTAATAGCATCGTAGCAATTTTATGCTACACCGGGTATAAT 3177720
Query 201192 CAAGAAGATAGTGTTATTCTTAATAAAGCATCTATTGAAAGAGGTTTATTCGGT 201245
||||||||| |||||| | ||| | || || ||||||||||||| ||| ||
Sbjct 3177721 CAAGAAGATTCCGTTATTTTAAATGCATCAGCTGTTGAAAGAGGTTTTTTCCGT 3177774
>seq295
Length=373786
Score = 93.3 bits (102), Expect = 6e-14
Identities = 165/235 (70%), Gaps = 12/235 (5%)
Strand=Plus/Plus
Query 180549 AAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATA 180608
||||||| ||||| ||||| |||||||| ||||||||||||||| |||||| |||||
Sbjct 5454 AAGAAGGCGATTTGGGACCTATTTATGGTTTTCAATGGAGACATTATGGAGCTGAATATG 5513
Query 180609 TTGACTGTG-ATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAA 180667
| | | || | || | |||| ||||||| || ||||||| | ||||| |
Sbjct 5514 GT-AATATGCACACTGATTATACTAATAAAGGTATTGATCAATTAATGGATGTTATTAAT 5572
Query 180668 ACTATAAAAAATAATCCCGAATG-CCGAAGAATAATCATAGATAGTTGGAATGTATCACA 180726
||||| |||||||| || | || ||||| ||||| || | ||||| | | ||
Sbjct 5573 ACTATTAAAAATAA-ACCAACTGATCGAAGGATAATTATGTGTGCTTGGA----ACCCCA 5627
Query 180727 AT----TACCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGT 180777
| | || | ||||| | || || ||||| ||||| || |||||||||||
Sbjct 5628 TTGATATCCCTAAAATGGCATTACCTCCTTGTCATTGTTTAGTTCAATTTTATGT 5682
>seq236
Length=660955
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 122077 TaaaaaaaaTGCTGTTATTATGGGTCGAAAAACTTGGGATAGTATTCCTGATAAATTTAA 122136
||| ||||||| |||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct 652596 TAAGAAAAATGTTGTTATCATGGGTCGAAAAACTTGGGATAGTATTCCACCTAAATACAA 652655
Query 122137 ACCATTaaaaaa 122148
||||||||| ||
Sbjct 652656 ACCATTAAATAA 652667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655222032293000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |