Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq295 89.7 6e-13
seq236 86.0 8e-12
>seq295
Length=373786
Score = 89.7 bits (98), Expect = 6e-13
Identities = 286/440 (65%), Gaps = 23/440 (5%)
Strand=Plus/Plus
Query 171608 TTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTA--AATGATAT 171665
|| |||||||||||||| | |||| ||| || | | ||| | ||| || || |
Sbjct 5328 TTGAAGAACTTTTATGGTTCATTAGAGGGAGTACCAACGCTAAAGATTTAGCAAAGAAAA 5387
Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTAC 171725
| ||| || |||||||| || | | | |||| |||||| | | || || ||
Sbjct 5388 ATGTG--AATATTTGGAATCCCAACAGCACCAGGGAATATTTAGACTCAATTGGTTTAAC 5445
Query 171726 TGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGC 171785
||| | ||||||| ||||| || || |||||||| ||||||||||||||| || ||
Sbjct 5446 TGATCGTGAAGAAGGCGATTTGGGACCTATTTATGGTTTTCAATGGAGACATTATGGAGC 5505
Query 171786 TCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAAC 171845
| ||||| | | || ||||| || |||| | || ||||||| |
Sbjct 5506 TGAATATGGTAATATGCACACTGATTATACTAATAAAGGTATTGATCAATTAATGGATGT 5565
Query 171846 TATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGT 171905
|||||||||| | |||| || ||| | ||||||| | || | |||||
Sbjct 5566 TATTAATACTATTAAAAATAAACCAACTGATCGAAGGATAATTATGTGTGCTTGGA---- 5621
Query 171906 ACCTCAACTTGA------TAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTA 171959
||| || |||| |||||||| | |||||||| || ||||| ||||||||
Sbjct 5622 ACCCCA--TTGATATCCCTAAAATGGCATTACCTCCTTGTCATTGTTTAGTTCAATTTTA 5679
Query 171960 TGT--CAGaaaaaaaTCAATCTTAGATTGTCAGTTATATCAAAGATCAGCTGATTTAGGA 172017
||| | ||| | | | || |||| ||||||||| | ||||| ||| | ||
Sbjct 5680 TGTAGCCGAAGGAGAACTTTC-----TTGTTTATTATATCAACGTTCAGCGGATATGGGT 5734
Query 172018 TTGGGGGTACCTTATAATAT 172037
| || || |||| ||||||
Sbjct 5735 CTTGGAGTTCCTTTTAATAT 5754
>seq236
Length=660955
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 116998 TAGTaaaaaaaaTGCTGTTATTATGGGTCGAAAAACATGGGATAGTATTCCTAATAAATT 117057
|| ||| ||||||| |||||| |||||||||||||| |||||||||||||| |||||
Sbjct 652593 TAATAAGAAAAATGTTGTTATCATGGGTCGAAAAACTTGGGATAGTATTCCACCTAAATA 652652
Query 117058 TAAACCATTAAAAAA 117072
||||||||||| ||
Sbjct 652653 CAAACCATTAAATAA 652667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628475598558720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |