Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq241 91.5 3e-13
seq30 84.2 4e-11
>seq241
Length=949647
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/130 (75%), Gaps = 11/130 (8%)
Strand=Plus/Minus
Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699
|||| ||||| || || |||||||| ||||| | | |||||||| |||
Sbjct 166470 ATTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAA 166411
Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759
|||||| || ||||||| |||| | ||| ||||||||||||| ||||| ||||| | ||
Sbjct 166410 AGATTAATCGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGGATCTTAGCTTTAACAT 166351
Query 81760 TTTCAATCGT 81769
||||||| ||
Sbjct 166350 TTTCAATGGT 166341
Score = 86.0 bits (94), Expect = 1e-11
Identities = 100/137 (73%), Gaps = 11/137 (8%)
Strand=Plus/Minus
Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA------- 81696
||||| ||||||| || ||||| |||||||| ||||| | | ||||| ||
Sbjct 166021 AGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGTACGTCCATCTTCCAATTGTTTT 165962
Query 81697 ----CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752
||||||| | | ||||||| |||| | ||| ||||||||||||||||||| |||
Sbjct 165961 CCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGAATCTTAGCT 165902
Query 81753 TTTATATTTTCAATCGT 81769
|| | |||||| || ||
Sbjct 165901 TTAACATTTTCTATGGT 165885
>seq30
Length=603363
Score = 84.2 bits (92), Expect = 4e-11
Identities = 102/139 (73%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 142954 TTCCTATTTATACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCCGTCT 143013
|||| |||| |||||| ||||||||||| ||| |||||| | | | ||||| || |
Sbjct 442751 TTCCAATTTTAACAGATGAAGATGAGTGGTCTATGTGGAAAGATAGAGGAGATCCAGTTT 442810
Query 143014 TGCATATAGAACTTAGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATA 143073
||||||| || | | | |||||| ||| | ||| | || || || ||| || ||||
Sbjct 442811 TGCATATTGATTTGGGAAAATGGGCTGATTTATTTGTGATTGCACCTTTAGATGCTAATA 442870
Query 143074 CGTTAGCAAAAATAGCCAA 143092
| ||||||||||| || ||
Sbjct 442871 CCTTAGCAAAAATTGCAAA 442889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903331281986720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |