Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq241 91.5 3e-13 seq30 84.2 4e-11 >seq241 Length=949647 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/130 (75%), Gaps = 11/130 (8%) Strand=Plus/Minus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 |||| ||||| || || |||||||| ||||| | | |||||||| ||| Sbjct 166470 ATTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAA 166411 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 |||||| || ||||||| |||| | ||| ||||||||||||| ||||| ||||| | || Sbjct 166410 AGATTAATCGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGGATCTTAGCTTTAACAT 166351 Query 81760 TTTCAATCGT 81769 ||||||| || Sbjct 166350 TTTCAATGGT 166341 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/137 (73%), Gaps = 11/137 (8%) Strand=Plus/Minus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA------- 81696 ||||| ||||||| || ||||| |||||||| ||||| | | ||||| || Sbjct 166021 AGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGTACGTCCATCTTCCAATTGTTTT 165962 Query 81697 ----CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 ||||||| | | ||||||| |||| | ||| ||||||||||||||||||| ||| Sbjct 165961 CCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGAATCTTAGCT 165902 Query 81753 TTTATATTTTCAATCGT 81769 || | |||||| || || Sbjct 165901 TTAACATTTTCTATGGT 165885 >seq30 Length=603363 Score = 84.2 bits (92), Expect = 4e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 142954 TTCCTATTTATACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCCGTCT 143013 |||| |||| |||||| ||||||||||| ||| |||||| | | | ||||| || | Sbjct 442751 TTCCAATTTTAACAGATGAAGATGAGTGGTCTATGTGGAAAGATAGAGGAGATCCAGTTT 442810 Query 143014 TGCATATAGAACTTAGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATA 143073 ||||||| || | | | |||||| ||| | ||| | || || || ||| || |||| Sbjct 442811 TGCATATTGATTTGGGAAAATGGGCTGATTTATTTGTGATTGCACCTTTAGATGCTAATA 442870 Query 143074 CGTTAGCAAAAATAGCCAA 143092 | ||||||||||| || || Sbjct 442871 CCTTAGCAAAAATTGCAAA 442889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903331281986720