Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 2e-13
seq1159 82.4 1e-10
seq893 82.4 1e-10
seq553 82.4 1e-10
seq531 82.4 1e-10
seq225 82.4 1e-10
seq175 82.4 1e-10
seq135 82.4 1e-10
seq17 82.4 1e-10
>seq3
Length=1687240
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| ||| |||||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 351164 TAATCCCAGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 351223
Query 8715 TTCCCCGACGAGGAG 8729
||||||||| ||||
Sbjct 351224 TTCCCCGACTGGGAG 351238
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| |||||||| |||||||||||||||||| | |||| |||||||| | ||||||
Sbjct 351239 ACTCCCAGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 351180
Query 139412 ATACTAACGAGGATT 139426
|||||||| |||||
Sbjct 351179 ATACTAACTGGGATT 351165
Score = 86.0 bits (94), Expect = 8e-12
Identities = 60/67 (90%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 11735 GTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 11793
|||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||||
Sbjct 351172 GTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 351231
Query 11794 CGAGGAG 11800
| ||||
Sbjct 351232 CTGGGAG 351238
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 1139742 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 1139801
Query 8725 AGGAG 8729
||||
Sbjct 1139802 GGGAG 1139806
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 1149347 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 1149406
Query 8725 AGGAG 8729
||||
Sbjct 1149407 GGGAG 1149411
>seq1159
Length=103958
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 59018 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 59077
Query 8725 AGGAG 8729
||||
Sbjct 59078 GGGAG 59082
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 62318 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 62377
Query 8725 AGGAG 8729
||||
Sbjct 62378 GGGAG 62382
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 68672 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 68731
Query 8725 AGGAG 8729
||||
Sbjct 68732 GGGAG 68736
>seq893
Length=103898
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 102167 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 102108
Query 8725 AGGAG 8729
||||
Sbjct 102107 GGGAG 102103
>seq553
Length=76951
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 30715 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 30656
Query 8725 AGGAG 8729
||||
Sbjct 30655 GGGAG 30651
>seq531
Length=395284
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 377529 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 377470
Query 8725 AGGAG 8729
||||
Sbjct 377469 GGGAG 377465
>seq225
Length=154944
Score = 82.4 bits (90), Expect = 1e-10
Identities = 67/80 (84%), Gaps = 1/80 (1%)
Strand=Plus/Plus
Query 11722 TAACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGG 11780
||| | ||||| | |||||||||||| ||||| |||| ||||| | |||||||||||||
Sbjct 56334 TAAACAAGTCCCAGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGG 56393
Query 11781 TTCGATTCCCCGACGAGGAG 11800
|||||||||||| | ||||
Sbjct 56394 TTCGATTCCCCGTCTGGGAG 56413
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 56349 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 56408
Query 8725 AGGAG 8729
||||
Sbjct 56409 GGGAG 56413
>seq175
Length=389053
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 383537 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 383596
Query 8725 AGGAG 8729
||||
Sbjct 383597 GGGAG 383601
>seq135
Length=268754
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 199362 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 199421
Query 8725 AGGAG 8729
||||
Sbjct 199422 GGGAG 199426
>seq17
Length=472010
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724
|||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| |
Sbjct 321786 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 321727
Query 8725 AGGAG 8729
||||
Sbjct 321726 GGGAG 321722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652787047716880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |