Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 2e-13 seq1159 82.4 1e-10 seq893 82.4 1e-10 seq553 82.4 1e-10 seq531 82.4 1e-10 seq225 82.4 1e-10 seq175 82.4 1e-10 seq135 82.4 1e-10 seq17 82.4 1e-10 >seq3 Length=1687240 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||| |||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 351164 TAATCCCAGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 351223 Query 8715 TTCCCCGACGAGGAG 8729 ||||||||| |||| Sbjct 351224 TTCCCCGACTGGGAG 351238 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| |||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 351239 ACTCCCAGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 351180 Query 139412 ATACTAACGAGGATT 139426 |||||||| ||||| Sbjct 351179 ATACTAACTGGGATT 351165 Score = 86.0 bits (94), Expect = 8e-12 Identities = 60/67 (90%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 11735 GTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 11793 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 351172 GTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 351231 Query 11794 CGAGGAG 11800 | |||| Sbjct 351232 CTGGGAG 351238 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 1139742 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 1139801 Query 8725 AGGAG 8729 |||| Sbjct 1139802 GGGAG 1139806 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 1149347 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 1149406 Query 8725 AGGAG 8729 |||| Sbjct 1149407 GGGAG 1149411 >seq1159 Length=103958 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 59018 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 59077 Query 8725 AGGAG 8729 |||| Sbjct 59078 GGGAG 59082 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 62318 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 62377 Query 8725 AGGAG 8729 |||| Sbjct 62378 GGGAG 62382 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 68672 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 68731 Query 8725 AGGAG 8729 |||| Sbjct 68732 GGGAG 68736 >seq893 Length=103898 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 102167 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 102108 Query 8725 AGGAG 8729 |||| Sbjct 102107 GGGAG 102103 >seq553 Length=76951 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 30715 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 30656 Query 8725 AGGAG 8729 |||| Sbjct 30655 GGGAG 30651 >seq531 Length=395284 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 377529 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 377470 Query 8725 AGGAG 8729 |||| Sbjct 377469 GGGAG 377465 >seq225 Length=154944 Score = 82.4 bits (90), Expect = 1e-10 Identities = 67/80 (84%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 11722 TAACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGG 11780 ||| | ||||| | |||||||||||| ||||| |||| ||||| | ||||||||||||| Sbjct 56334 TAAACAAGTCCCAGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGG 56393 Query 11781 TTCGATTCCCCGACGAGGAG 11800 |||||||||||| | |||| Sbjct 56394 TTCGATTCCCCGTCTGGGAG 56413 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 56349 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 56408 Query 8725 AGGAG 8729 |||| Sbjct 56409 GGGAG 56413 >seq175 Length=389053 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 383537 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 383596 Query 8725 AGGAG 8729 |||| Sbjct 383597 GGGAG 383601 >seq135 Length=268754 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 199362 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 199421 Query 8725 AGGAG 8729 |||| Sbjct 199422 GGGAG 199426 >seq17 Length=472010 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| | Sbjct 321786 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCT 321727 Query 8725 AGGAG 8729 |||| Sbjct 321726 GGGAG 321722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652787047716880