Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq241 82.4 7e-11 >seq241 Length=949647 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||||| || || || ||||||||||| | || | | | || || | Sbjct 167851 AAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGTACGTCCA-TCTTCCAA 167793 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || || || ||| |||| | ||||| || || || ||||| ||||||||||| ||| Sbjct 167792 TTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGAT 167733 Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| | | | |||| || || | || ||||| || | ||||| |||||| | Sbjct 167732 -TTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTTTTTC 167674 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || | ||||||||||| || ||||| Sbjct 167673 CAGTTAATGTTTTTACGAAGATTTGCAT 167646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483378035387480