Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq241 134 9e-27
seq412 93.3 3e-14
>seq241
Length=949647
Score = 134 bits (148), Expect = 9e-27
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||||||||| | || |||||||| ||||| || ||||| || |||||||| ||
Sbjct 166048 CCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAA 165989
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || ||| | || |||||||||||||| ||||| |||||||| || |||||| | ||
Sbjct 165988 AGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGG 165929
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| || || ||| || | || ||||| || | ||||||| || || ||
Sbjct 165928 ATTCCTTCCTTATCTTGAATCTT-AGCTTTAACATTTTCTATGGTGTCGGATGGCTCAAC 165870
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | || || || || || || || ||||| || |||||||||||
Sbjct 165869 TTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822
Score = 134 bits (148), Expect = 9e-27
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| |||||||| | ||||||||||| || || |||||||| ||||||||||| ||
Sbjct 166276 CCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAA 166217
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| |||||| |||| || |||||||| || ||||| || || || || |||||| | ||
Sbjct 166216 AGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGA 166157
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| |||||||| || ||||| | || ||||| || | ||| || || || ||
Sbjct 166156 ATTCCTTCTTTATCCTGGATTTT-AGCTTTAACATTTTCAATGGTATCAGATGGCTCAAC 166098
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | || || ||||| || || || ||||| ||||||||||||||
Sbjct 166097 TTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050
Score = 129 bits (142), Expect = 4e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| ||||| | || ||||| || ||||| || ||||| || |||||||||||
Sbjct 165820 CCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAA 165761
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || ||| | || || ||||||||||||||||| ||||| || || || ||| | ||
Sbjct 165760 AGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGG 165701
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || |||||||| |||||| ||| |||| || | ||||| || || ||
Sbjct 165700 ATCCCCTCTTTGTCCTGGATTTTCGCCTTC-ACATTTTCAATAGTGTCAGATGGCTCGAC 165642
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | |||||| |||||||| || || ||||| || || ||||||||
Sbjct 165641 CTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594
Score = 129 bits (142), Expect = 4e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
|| ||||| |||||| || ||||| || |||||||| || || || ||| | || |||
Sbjct 167854 ACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGTACGTCCATCTTCC 167795
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
|||||||| || || |||||||||||||| |||||| | || | ||||| |||||
Sbjct 167794 AATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGG 167735
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
||||| | || ||||| || | || || | |||||| || | ||||| |||||
Sbjct 167734 ATTTT-AGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTTTT 167676
Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| ||||| |||||||| ||||| |||||
Sbjct 167675 TCCAGTTAATGTTTTTACGAAGATTTGCAT 167646
Score = 125 bits (138), Expect = 5e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|||||||| || | || || ||||| || || |||||||| ||||||||||| ||
Sbjct 167644 CCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAA 167585
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || | || || |||||||| ||||| || || ||||| || |||||| | ||
Sbjct 167584 AGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGG 167525
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| ||||| | || ||||| || | ||| || | ||||||
Sbjct 167524 ATTCCTTCCTTGTCTTGGATTTT-AGCTTTAACATTTTCAATGGTATCAGAAGGTTCCAC 167466
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| ||||| || ||||| |||||||| ||||| |||||
Sbjct 167465 TTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| |||||||| | || || ||||| || ||| ||||| || ||||||||||| ||
Sbjct 166504 CCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAA 166445
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || || |||||||| || ||||| || || || || |||||| | ||
Sbjct 166444 AGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGG 166385
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| || || || || | || ||||| || | ||||||| || ||| ||
Sbjct 166384 ATTCCTTCCTTATCTTGGATCTT-AGCTTTAACATTTTCAATGGTGTCGGATGGTTCGAC 166326
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| |||||||| ||||| || || ||||| || |||||
Sbjct 166325 TTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166278
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|||||||| || | || || ||||| || || |||||||| ||||||||||| ||
Sbjct 167416 CCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAA 167357
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || | || || | |||||| ||||| || |||||||| || |||||| | ||
Sbjct 167356 AGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGG 167297
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| ||||| | || ||||| || | ||| || || || ||
Sbjct 167296 ATTCCTTCCTTGTCTTGGATTTT-AGCTTTAACATTCTCAATGGTATCAGATGGCTCAAC 167238
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | || || ||||| || || || ||||| ||||||||||||||
Sbjct 167237 TTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190
Score = 109 bits (120), Expect = 4e-19
Identities = 171/241 (71%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570
|||||| || ||||||||||| | || || ||||| ||||| |||||||| |||
Sbjct 166972 AAAATCTGCATTCCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATG 166913
Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630
||||| || || || || || | || || | |||||| || ||||| || ||||| ||
Sbjct 166912 TTGTAGTCAGAAAGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGT 166853
Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689
|||||| | || | |||||||| || || || | || ||||| || | || ||
Sbjct 166852 TGATCTGGAGGAATTCCTTCTTTATCCTGGATCTT-AGCTTTAACATTTTCAATTGTATC 166794
Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| ||| || || | ||||| |||||||| ||||| || || ||||| || |||||
Sbjct 166793 AGAAGGTTCAACTTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734
Query 33750 A 33750
|
Sbjct 166733 A 166733
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||||||||| | || ||||| || ||||| || ||||| || |||||||| ||
Sbjct 167188 CCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAA 167129
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || || | |||||| ||||| || || ||||| || |||||| | ||
Sbjct 167128 AGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGA 167069
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| || || ||||| | || ||||| || | ||| || || || ||
Sbjct 167068 ATTCCTTCCTTATCCTGGATTTT-AGCTTTAACATTTTCAATGGTATCAGATGGCTCAAC 167010
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | || || ||||| || || || ||||| ||||| ||||||||
Sbjct 167009 TTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962
>seq412
Length=275653
Score = 93.3 bits (102), Expect = 3e-14
Identities = 162/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | ||| | || || ||||| | || ||||| || || || ||||| ||
Sbjct 83015 CCACCACGCAATCTTAGGACTAAATGCAACGTTGATTCTTTCTGAATATTATAATCAGAA 82956
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || || | ||||||||| || ||||| |||||||| ||||| | ||
Sbjct 82955 AGAGTGCGCCCATCTTCGAGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGGG 82896
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || |||||||| || || || | ||| || | ||| ||| | || ||
Sbjct 82895 ATTCCCTCTTTGTCTTGGATCTTAGCCTTGA-CATTTTCGATGGTATCGGAAGGCTCGAC 82837
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754
|||| || || || || || ||||| ||||| ||||||||||||||| |||
Sbjct 82836 CTCAAGAGTTATGGTCTTGCCAGTTAAAGTTTTAACAAAGATCTGCATATTTG 82784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328675648971840
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