Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq241 104 6e-17 >seq241 Length=949647 Score = 104 bits (114), Expect = 6e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| | || |||||||| || ||||||||||| || ||||| Sbjct 166053 CAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATCTGAT 166112 Query 206233 ACAGTCGAATCAG-TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| | |||||| ||| || || || |||||||||||| || || || Sbjct 166113 ACCATTGAAAATGTTAAAGCTAAA-ATCCAGGATAAAGAAGGAATTCCTCCAGATCAACA 166171 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | || | ||||| || || || || || ||||| ||| | ||| | | ||||||||| | Sbjct 166172 ACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAACAT 166231 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| ||||| || || || || | || |||||| Sbjct 166232 CCAAAAAGAATCAACCCTCCATTTGGTGTTGAGA 166265 Score = 100 bits (110), Expect = 7e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | || ||||| || || || |||||||| || || ||| Sbjct 165825 CAGATCTTCGTCAAAACTTTGACTGGAAAGACTATTACATTGGAAGTTGAGCCATCCGAC 165884 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || ||||||||| || |||||||| || || || Sbjct 165885 ACCATAGAAAATGTTAAAGCTAA-GATTCAAGATAAGGAAGGAATCCCACCAGATCAACA 165943 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | | ||||| || ||||| || |||||||||||| | ||| | | |||||||| | Sbjct 165944 ACGTTTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACTCTTTCTGATTACAATAT 166003 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| || || || |||||||| | || |||||| Sbjct 166004 CCAAAAGGAATCAACTCTTCATTTGGTATTGAGA 166037 Score = 100 bits (110), Expect = 7e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| | || |||||||| || ||||| ||||| || ||||| Sbjct 166965 CAGATTTTTGTCAAAACTTTGACTGGAAAAACTATTACTTTAGAAGTTGAGCCATCTGAT 167024 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| ||| || || || || ||||||||| || || || Sbjct 167025 ACCATTGAAAATGTTAAAGCTAAA-ATCCAGGATAAGGAAGGAATTCCTCCAGATCAACA 167083 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | | ||||||||||| || || | |||||||| | ||| | | |||||||| | Sbjct 167084 ACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGGCGCACTCTTTCTGATTACAATAT 167143 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| || || |||||||| ||| | || |||||| Sbjct 167144 CCAAAAGGAATCTACTCTCCACTTGGTATTGAGA 167177 Score = 95.1 bits (104), Expect = 3e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || ||||| ||||| |||||||| ||| |||||| || | ||| || ||||| Sbjct 166530 ACTGGTAAAACCATCACATTGGAAGTCGAACCTTCTGATACTATTGAAAACGTTAAAGCT 166589 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| || || || |||||||| || || ||| ||| | | ||||||||||| || Sbjct 166590 AAA-ATCCAGGATAAAGAAGGGATCCCACCAGACCAACAACGTTTAATCTTCGCCGGTAA 166648 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || | ||||||||| | ||| | | ||||| ||| |||| ||||| || || || || Sbjct 166649 ACAACTTGAAGATGGACGTACTCTTTCGGATTATAACATCCAAAAAGAATCCACCCTCCA 166708 Query 206373 CCTTGTTTTGAGACTTCGA 206391 | || |||||| | ||| Sbjct 166709 TTTAGTGTTGAGATTGCGA 166727 Score = 95.1 bits (104), Expect = 3e-14 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || |||||||| ||||| | ||||||||| |||||| || | ||| Sbjct 167433 AAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTCTGATACCATTGAAAAT 167492 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || ||||| || |||||||| || || ||| | | ||||| Sbjct 167493 GTTAAAGCTAAA-ATCCAAGACAAGGAAGGAATCCCACCAGATCAACAACGTTTAATCTT 167551 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| || || || |||||||| | ||| | | ||||||||| | || ||||| || Sbjct 167552 CGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAACATTCAAAAAGAATC 167611 Query 206364 TACTCTTCACCTTGTTTTGAG 206384 || || || | || ||||| Sbjct 167612 AACCCTCCATTTAGTATTGAG 167632 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || ||||| ||||| |||||||| ||| |||||| ||| | ||| || ||||| Sbjct 166758 ACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCTGATACAATTGAAAATGTTAAAGCT 166817 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||| || || |||||||||||| || || ||| | | ||||| || || || Sbjct 166818 AA-GATCCAGGATAAAGAAGGAATTCCTCCAGATCAACAACGTTTAATCTTTGCTGGTAA 166876 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || | |||||||| | ||| | | || |||||| |||| ||||| || ||||| || Sbjct 166877 ACAACTTGAAGATGGGCGTACTCTTTCTGACTACAACATCCAAAAAGAATCAACTCTCCA 166936 Query 206373 CCTTGTTTTGAGA 206385 | || |||||| Sbjct 166937 TTTAGTATTGAGA 166949 Score = 89.7 bits (98), Expect = 1e-12 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| | || |||||||| || || |||||||| || ||||| Sbjct 167193 CAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATCTGAT 167252 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || || ||||| ||| || ||||| || |||||||| || || || Sbjct 167253 ACCATTGAGAATGTTAAAGCTAAA-ATCCAAGACAAGGAAGGAATCCCACCAGATCAACA 167311 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | | ||||||||||| || || | |||||||| | ||| | | ||||||||| | Sbjct 167312 ACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACAT 167371 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAG 206384 ||| ||||| || || || || | || ||||| Sbjct 167372 CCAAAAAGAATCAACCCTCCATTTAGTATTGAG 167404 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/192 (72%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || |||||||| ||||| || ||||||||| |||||| || | ||| Sbjct 167661 AAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTCTGATACTATTGAAAAT 167720 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--AT 206300 || ||||| ||| || ||||| || |||||||| || || |||| || || || Sbjct 167721 GTTAAAGCTAAA-ATCCAAGACAAGGAAGGAATCCCACCAGA---TCAACAGCGTTTGAT 167776 Query 206301 CTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGA 206360 ||||| || || || |||||||||||| | || | | |||||||| |||| || || Sbjct 167777 TTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAATATCCAAAAGGA 167836 Query 206361 GTCTACTCTTCA 206372 || ||||| || Sbjct 167837 ATCCACTCTGCA 167848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181713639506917