Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq241 104 6e-17
>seq241
Length=949647
Score = 104 bits (114), Expect = 6e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| |||||| | || |||||||| || ||||||||||| || |||||
Sbjct 166053 CAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATCTGAT 166112
Query 206233 ACAGTCGAATCAG-TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| | |||||| ||| || || || |||||||||||| || || ||
Sbjct 166113 ACCATTGAAAATGTTAAAGCTAAA-ATCCAGGATAAAGAAGGAATTCCTCCAGATCAACA 166171
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| || | ||||| || || || || || ||||| ||| | ||| | | ||||||||| |
Sbjct 166172 ACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAACAT 166231
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||| ||||| || || || || | || ||||||
Sbjct 166232 CCAAAAAGAATCAACCCTCCATTTGGTGTTGAGA 166265
Score = 100 bits (110), Expect = 7e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| | || ||||| || || || |||||||| || || |||
Sbjct 165825 CAGATCTTCGTCAAAACTTTGACTGGAAAGACTATTACATTGGAAGTTGAGCCATCCGAC 165884
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| || ||||| || ||||||||| || |||||||| || || ||
Sbjct 165885 ACCATAGAAAATGTTAAAGCTAA-GATTCAAGATAAGGAAGGAATCCCACCAGATCAACA 165943
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | | ||||| || ||||| || |||||||||||| | ||| | | |||||||| |
Sbjct 165944 ACGTTTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACTCTTTCTGATTACAATAT 166003
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||| || || || |||||||| | || ||||||
Sbjct 166004 CCAAAAGGAATCAACTCTTCATTTGGTATTGAGA 166037
Score = 100 bits (110), Expect = 7e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| |||||| | || |||||||| || ||||| ||||| || |||||
Sbjct 166965 CAGATTTTTGTCAAAACTTTGACTGGAAAAACTATTACTTTAGAAGTTGAGCCATCTGAT 167024
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| || ||||| ||| || || || || ||||||||| || || ||
Sbjct 167025 ACCATTGAAAATGTTAAAGCTAAA-ATCCAGGATAAGGAAGGAATTCCTCCAGATCAACA 167083
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | | ||||||||||| || || | |||||||| | ||| | | |||||||| |
Sbjct 167084 ACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGGCGCACTCTTTCTGATTACAATAT 167143
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||| || || |||||||| ||| | || ||||||
Sbjct 167144 CCAAAAGGAATCTACTCTCCACTTGGTATTGAGA 167177
Score = 95.1 bits (104), Expect = 3e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252
|| || ||||| ||||| |||||||| ||| |||||| || | ||| || |||||
Sbjct 166530 ACTGGTAAAACCATCACATTGGAAGTCGAACCTTCTGATACTATTGAAAACGTTAAAGCT 166589
Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312
||| || || || |||||||| || || ||| ||| | | ||||||||||| ||
Sbjct 166590 AAA-ATCCAGGATAAAGAAGGGATCCCACCAGACCAACAACGTTTAATCTTCGCCGGTAA 166648
Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
|| | ||||||||| | ||| | | ||||| ||| |||| ||||| || || || ||
Sbjct 166649 ACAACTTGAAGATGGACGTACTCTTTCGGATTATAACATCCAAAAAGAATCCACCCTCCA 166708
Query 206373 CCTTGTTTTGAGACTTCGA 206391
| || |||||| | |||
Sbjct 166709 TTTAGTGTTGAGATTGCGA 166727
Score = 95.1 bits (104), Expect = 3e-14
Identities = 143/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || |||||||| ||||| | ||||||||| |||||| || | |||
Sbjct 167433 AAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTCTGATACCATTGAAAAT 167492
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| ||| || ||||| || |||||||| || || ||| | | |||||
Sbjct 167493 GTTAAAGCTAAA-ATCCAAGACAAGGAAGGAATCCCACCAGATCAACAACGTTTAATCTT 167551
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| || || || |||||||| | ||| | | ||||||||| | || ||||| ||
Sbjct 167552 CGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAACATTCAAAAAGAATC 167611
Query 206364 TACTCTTCACCTTGTTTTGAG 206384
|| || || | || |||||
Sbjct 167612 AACCCTCCATTTAGTATTGAG 167632
Score = 93.3 bits (102), Expect = 1e-13
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252
|| || ||||| ||||| |||||||| ||| |||||| ||| | ||| || |||||
Sbjct 166758 ACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCTGATACAATTGAAAATGTTAAAGCT 166817
Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312
|| ||| || || |||||||||||| || || ||| | | ||||| || || ||
Sbjct 166818 AA-GATCCAGGATAAAGAAGGAATTCCTCCAGATCAACAACGTTTAATCTTTGCTGGTAA 166876
Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
|| | |||||||| | ||| | | || |||||| |||| ||||| || ||||| ||
Sbjct 166877 ACAACTTGAAGATGGGCGTACTCTTTCTGACTACAACATCCAAAAAGAATCAACTCTCCA 166936
Query 206373 CCTTGTTTTGAGA 206385
| || ||||||
Sbjct 166937 TTTAGTATTGAGA 166949
Score = 89.7 bits (98), Expect = 1e-12
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| |||||| | || |||||||| || || |||||||| || |||||
Sbjct 167193 CAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATCTGAT 167252
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | || || ||||| ||| || ||||| || |||||||| || || ||
Sbjct 167253 ACCATTGAGAATGTTAAAGCTAAA-ATCCAAGACAAGGAAGGAATCCCACCAGATCAACA 167311
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | | ||||||||||| || || | |||||||| | ||| | | ||||||||| |
Sbjct 167312 ACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACAT 167371
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAG 206384
||| ||||| || || || || | || |||||
Sbjct 167372 CCAAAAAGAATCAACCCTCCATTTAGTATTGAG 167404
Score = 87.8 bits (96), Expect = 4e-12
Identities = 138/192 (72%), Gaps = 8/192 (4%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || |||||||| ||||| || ||||||||| |||||| || | |||
Sbjct 167661 AAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTCTGATACTATTGAAAAT 167720
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--AT 206300
|| ||||| ||| || ||||| || |||||||| || || |||| || || ||
Sbjct 167721 GTTAAAGCTAAA-ATCCAAGACAAGGAAGGAATCCCACCAGA---TCAACAGCGTTTGAT 167776
Query 206301 CTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGA 206360
||||| || || || |||||||||||| | || | | |||||||| |||| || ||
Sbjct 167777 TTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAATATCCAAAAGGA 167836
Query 206361 GTCTACTCTTCA 206372
|| ||||| ||
Sbjct 167837 ATCCACTCTGCA 167848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181713639506917
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |