Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq241 116 4e-21
seq569 109 5e-19
seq62 96.9 3e-15
seq1284 95.1 1e-14
>seq241
Length=949647
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| | ||| |||||||| | | |||| |||||||| |||||||| || | || ||
Sbjct 166268 CAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTGCG 166209
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
||||| | |||||||| | | |||||| || |||||||||||||| || |||||
Sbjct 166208 TCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGAATTCCTTC 166149
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|||||| ||||| ||| | | ||| | ||||| | ||||| ||||| | ||
Sbjct 166148 TTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCCAAAGT 166089
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| ||||| ||||||| ||||| | || ||||||||
Sbjct 166088 AATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| | ||| || ||||| | |||| |||||||| ||||||||||| | |||||
Sbjct 166952 CAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACG 166893
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
| |||||| || |||||||| | | |||||| ||| |||||||||||||| || |||||
Sbjct 166892 CCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTC 166833
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|||||| || || ||| | | ||| | ||||| | || || ||||| | ||
Sbjct 166832 TTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAACTTCCAAGGT 166773
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| |||||||| || | || || | ||||| |||||
Sbjct 166772 GATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| | ||| ||||| || | | || || ||||| || ||||| || | || ||
Sbjct 167180 CAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAAAGAGTGCG 167121
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
| |||||| || |||||||||| |||||| ||| |||||||||||||| || |||||
Sbjct 167120 CCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTC 167061
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| ||||| ||| | | ||| | ||||| | ||||| ||||| | ||
Sbjct 167060 CTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCTAAAGT 167001
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| ||||| ||||||| |||||| | |||||||||||
Sbjct 167000 AATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970
||| || ||||| | | |||| ||||||||||||||||| || | ||||| |||
Sbjct 167630 CAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATC 167571
Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
||| | |||||||||| |||||| ||| ||||||||||| || || ||||| || ||
Sbjct 167570 TTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTC 167511
Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090
||||| ||| | | ||| | ||||| | || |||||||| | || | ||
Sbjct 167510 TTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGATGGT 167451
Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||| ||||| | ||||||| ||| || |||||
Sbjct 167450 TTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418
Score = 111 bits (122), Expect = 1e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
||||| | ||| || ||||| | | | || |||||||| ||||| || || | |||
Sbjct 166726 CGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAAAGAGTA 166667
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| |||||| || |||||||||| |||||| ||| ||||| ||||| || || |||
Sbjct 166666 CGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGGATCCCT 166607
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
|||||||| ||||| ||| | | ||| | |||||| | || || ||||| |
Sbjct 166606 TCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACTTCCAAT 166547
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||||||||||| | || || | ||||| |||||
Sbjct 166546 GTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970
||| || ||||| | | |||| |||||||| |||||||| || | ||||| |||
Sbjct 167402 CAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATC 167343
Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
||| || |||||||||| |||| | ||| ||||||||||| || || ||||| || ||
Sbjct 167342 TTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTC 167283
Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090
||||| ||| | | || | ||||| | ||||| ||||| | || | ||
Sbjct 167282 TTGGATTTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGTAATAGT 167223
Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||| ||||||| |||||| | || ||||||||
Sbjct 167222 TTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190
Score = 107 bits (118), Expect = 2e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| | ||| ||||| || | |||| || ||||| || ||||| ||| | ||||||
Sbjct 165812 CAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAAAGGGTACG 165753
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| | ||||| |||| | |||| | || ||||| ||||| || || || ||
Sbjct 165752 TCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGGATCCCCTC 165693
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||| || ||||| |||| | ||| | ||| || | ||||| || || | |||
Sbjct 165692 TTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGACCTCTAACGT 165633
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| ||||||||||||| ||||| | ||||||||||||
Sbjct 165632 GATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594
Score = 102 bits (112), Expect = 8e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| | ||| |||||||| | |||| || ||||| || ||||| || | |||||
Sbjct 166040 CAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGTACG 165981
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| | ||||| || | | |||| | ||| ||||||||||| || || |||||
Sbjct 165980 TCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTC 165921
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| ||| || ||| | | ||| | || |||| ||||| ||||| | ||
Sbjct 165920 CTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAACTTCCAATGT 165861
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || ||||||| |||||| | ||| ||||||||
Sbjct 165860 AATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| | ||| | ||| ||||| | | || || ||||| || ||||| || | |||
Sbjct 167867 ACGTAGGCGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGT 167808
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| |||||| | |||||||| | | || | ||||||||||||||| || || ||
Sbjct 167807 ACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCC 167748
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| || || ||||| ||| | | ||| | |||||| | || |||||||| |
Sbjct 167747 TTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAA 167688
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||||| ||||| | ||||||| ||| || |||||
Sbjct 167687 GGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167646
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| | ||| || ||||| | | | || ||||| || |||||||| || | || ||
Sbjct 166496 CAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAAAGAGTGCG 166437
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
| |||||| | |||||||| | | |||||| || ||||||||||| || || |||||
Sbjct 166436 CCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGGATTCCTTC 166377
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| || || ||| | | ||| | || |||| || || ||||| | ||
Sbjct 166376 CTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGACTTCCAATGT 166317
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| ||||||||||| | || || | ||||| |||||
Sbjct 166316 GATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166278
>seq569
Length=200630
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | || || |||||||||||||||||| | || || |
Sbjct 134607 CGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGTCCA 134548
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| || |||||||| | |||||| ||| ||||||||||| || || || || ||
Sbjct 134547 TCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCCTCCTTG 134488
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| |||||| || | | ||| | ||||||| || || || |||| || |
Sbjct 134487 TCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGGGTGATG 134428
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|||||||| || || ||||| | |||||| |||||
Sbjct 134427 GTTTTACCGGTTAGGGTTTTCACGAAAATTTGCAT 134393
>seq62
Length=648032
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | |||| ||||||||||||||||| || | ||||| ||||||
Sbjct 445521 ACCAACTGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCA 445462
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
|| |||||||| || |||||| ||| |||| |||||| || || ||||| ||||
Sbjct 445461 AGTTGTTTACCAGAGAAGATTAAACGTTGTTCATCTGGTGGGATTCCTTCCGTATCTTGG 445402
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
||||| ||| | | ||| | ||||| | || |||||| | | || | |||
Sbjct 445401 ATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTCCTAAGGTGATGATTTCT 445342
Query 132095 CCAGTCAGAGTTTTTATGAAAAT 132117
||||| | |||||||| ||| ||
Sbjct 445341 CCAGTTAAAGTTTTTACGAAGAT 445319
>seq1284
Length=72753
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/208 (71%), Gaps = 8/208 (4%)
Strand=Plus/Minus
Query 148195 GTGGGACTCGCGTGCGTAAACAATTTTTGACTCA-TCATGCGA---TACGTCTCAATAGC 148250
|| ||||||||||| ||||| | || |||| |||| | || || ||||||||
Sbjct 52961 GTCGGACTCGCGTGAGTAAAATACTT----CTCAGACATGTAATTGTAAGTTTCAATAGC 52906
Query 148251 GTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCG 148310
||| ||||| || |||||||| || | || |||||||| | ||| || || || ||
Sbjct 52905 TGATTCAATGTCTTCACCGTGAATCCCAACGGCCACGCGCATTAACATATGTTGGGGACG 52846
Query 148311 TTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAA 148370
||| |||| || |||||| || || |||||| | |||||| ||||| |||||||
Sbjct 52845 TTCAGCAATTTTTCCGTTGATTTTTAGGAGATATGAACGTTCGAGTGTTTTAAAACCAAA 52786
Query 148371 GTACTTGTAATCAAAATCTAGCTCGTAA 148398
|| || || ||||| | ||||||
Sbjct 52785 ATAATTATATGAGAAATCACGATCGTAA 52758
Score = 91.5 bits (100), Expect = 1e-13
Identities = 117/159 (74%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 146551 ACAGTGAATTGT-TGTGTGTGCGCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTT 146609
|| |||||||| || || || || || ||||| || | ||||||||||| || |||||
Sbjct 54608 ACGGTGAATTGAATGGGT-TGAGCTGCGGGTTTCGTTCTTAAATAATACATTCCTGTTTT 54550
Query 146610 GAGGCCACATCGCCACGAGTGATTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGC 146669
|| || |||||| || | ||||| || || | | || ||| ||||| | ||
Sbjct 54549 AAGTCCTTGTCGCCAGCCGTAAAAATGAATTGATGTTAAAACGGAGTAAGTCGGTTTGGC 54490
Query 146670 CACGAAAAGATTAAACGATTGGCTTTGATCTATGAAAGC 146708
||| ||||||| || |||||||||||||| ||||||||
Sbjct 54489 TACGTAAAGATTTAAAGATTGGCTTTGATCGATGAAAGC 54451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476569037781720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |