Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq241 116 4e-21 seq569 109 5e-19 seq62 96.9 3e-15 seq1284 95.1 1e-14 >seq241 Length=949647 Score = 116 bits (128), Expect = 4e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| |||||||| | | |||| |||||||| |||||||| || | || || Sbjct 166268 CAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTGCG 166209 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||||| | |||||||| | | |||||| || |||||||||||||| || ||||| Sbjct 166208 TCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGAATTCCTTC 166149 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 |||||| ||||| ||| | | ||| | ||||| | ||||| ||||| | || Sbjct 166148 TTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCCAAAGT 166089 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||||| ||||||| ||||| | || |||||||| Sbjct 166088 AATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050 Score = 116 bits (128), Expect = 4e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| || ||||| | |||| |||||||| ||||||||||| | ||||| Sbjct 166952 CAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACG 166893 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 | |||||| || |||||||| | | |||||| ||| |||||||||||||| || ||||| Sbjct 166892 CCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTC 166833 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 |||||| || || ||| | | ||| | ||||| | || || ||||| | || Sbjct 166832 TTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAACTTCCAAGGT 166773 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | |||||||| || | || || | ||||| ||||| Sbjct 166772 GATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734 Score = 116 bits (128), Expect = 4e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| ||||| || | | || || ||||| || ||||| || | || || Sbjct 167180 CAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAAAGAGTGCG 167121 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 | |||||| || |||||||||| |||||| ||| |||||||||||||| || ||||| Sbjct 167120 CCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTC 167061 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||||| ||||| ||| | | ||| | ||||| | ||||| ||||| | || Sbjct 167060 CTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCTAAAGT 167001 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||||| ||||||| |||||| | ||||||||||| Sbjct 167000 AATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| || ||||| | | |||| ||||||||||||||||| || | ||||| ||| Sbjct 167630 CAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATC 167571 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | |||||||||| |||||| ||| ||||||||||| || || ||||| || || Sbjct 167570 TTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTC 167511 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||||| ||| | | ||| | ||||| | || |||||||| | || | || Sbjct 167510 TTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGATGGT 167451 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| ||||| | ||||||| ||| || ||||| Sbjct 167450 TTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 ||||| | ||| || ||||| | | | || |||||||| ||||| || || | ||| Sbjct 166726 CGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAAAGAGTA 166667 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || |||||| || |||||||||| |||||| ||| ||||| ||||| || || ||| Sbjct 166666 CGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGGATCCCT 166607 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 |||||||| ||||| ||| | | ||| | |||||| | || || ||||| | Sbjct 166606 TCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACTTCCAAT 166547 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||||||||| | || || | ||||| ||||| Sbjct 166546 GTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| || ||||| | | |||| |||||||| |||||||| || | ||||| ||| Sbjct 167402 CAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATC 167343 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || |||||||||| |||| | ||| ||||||||||| || || ||||| || || Sbjct 167342 TTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTC 167283 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||||| ||| | | || | ||||| | ||||| ||||| | || | || Sbjct 167282 TTGGATTTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGTAATAGT 167223 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| ||||||| |||||| | || |||||||| Sbjct 167222 TTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| ||||| || | |||| || ||||| || ||||| ||| | |||||| Sbjct 165812 CAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAAAGGGTACG 165753 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| | ||||| |||| | |||| | || ||||| ||||| || || || || Sbjct 165752 TCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGGATCCCCTC 165693 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||| || ||||| |||| | ||| | ||| || | ||||| || || | ||| Sbjct 165692 TTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGACCTCTAACGT 165633 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||||||||||||| ||||| | |||||||||||| Sbjct 165632 GATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594 Score = 102 bits (112), Expect = 8e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| |||||||| | |||| || ||||| || ||||| || | ||||| Sbjct 166040 CAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGTACG 165981 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| | ||||| || | | |||| | ||| ||||||||||| || || ||||| Sbjct 165980 TCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTC 165921 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||||| ||| || ||| | | ||| | || |||| ||||| ||||| | || Sbjct 165920 CTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAACTTCCAATGT 165861 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || ||||||| |||||| | ||| |||||||| Sbjct 165860 AATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | ||| ||||| | | || || ||||| || ||||| || | ||| Sbjct 167867 ACGTAGGCGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGT 167808 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||| | |||||||| | | || | ||||||||||||||| || || || Sbjct 167807 ACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCC 167748 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| || || ||||| ||| | | ||| | |||||| | || |||||||| | Sbjct 167747 TTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAA 167688 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| ||||| | ||||||| ||| || ||||| Sbjct 167687 GGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167646 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| || ||||| | | | || ||||| || |||||||| || | || || Sbjct 166496 CAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAAAGAGTGCG 166437 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 | |||||| | |||||||| | | |||||| || ||||||||||| || || ||||| Sbjct 166436 CCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGGATTCCTTC 166377 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||||| || || ||| | | ||| | || |||| || || ||||| | || Sbjct 166376 CTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGACTTCCAATGT 166317 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||||||||||| | || || | ||||| ||||| Sbjct 166316 GATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166278 >seq569 Length=200630 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | || || |||||||||||||||||| | || || | Sbjct 134607 CGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGTCCA 134548 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| || |||||||| | |||||| ||| ||||||||||| || || || || || Sbjct 134547 TCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCCTCCTTG 134488 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| || | | ||| | ||||||| || || || |||| || | Sbjct 134487 TCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGGGTGATG 134428 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || ||||| | |||||| ||||| Sbjct 134427 GTTTTACCGGTTAGGGTTTTCACGAAAATTTGCAT 134393 >seq62 Length=648032 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | |||| ||||||||||||||||| || | ||||| |||||| Sbjct 445521 ACCAACTGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCA 445462 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || |||||||| || |||||| ||| |||| |||||| || || ||||| |||| Sbjct 445461 AGTTGTTTACCAGAGAAGATTAAACGTTGTTCATCTGGTGGGATTCCTTCCGTATCTTGG 445402 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| ||| | | ||| | ||||| | || |||||| | | || | ||| Sbjct 445401 ATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTCCTAAGGTGATGATTTCT 445342 Query 132095 CCAGTCAGAGTTTTTATGAAAAT 132117 ||||| | |||||||| ||| || Sbjct 445341 CCAGTTAAAGTTTTTACGAAGAT 445319 >seq1284 Length=72753 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 148195 GTGGGACTCGCGTGCGTAAACAATTTTTGACTCA-TCATGCGA---TACGTCTCAATAGC 148250 || ||||||||||| ||||| | || |||| |||| | || || |||||||| Sbjct 52961 GTCGGACTCGCGTGAGTAAAATACTT----CTCAGACATGTAATTGTAAGTTTCAATAGC 52906 Query 148251 GTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCG 148310 ||| ||||| || |||||||| || | || |||||||| | ||| || || || || Sbjct 52905 TGATTCAATGTCTTCACCGTGAATCCCAACGGCCACGCGCATTAACATATGTTGGGGACG 52846 Query 148311 TTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAA 148370 ||| |||| || |||||| || || |||||| | |||||| ||||| ||||||| Sbjct 52845 TTCAGCAATTTTTCCGTTGATTTTTAGGAGATATGAACGTTCGAGTGTTTTAAAACCAAA 52786 Query 148371 GTACTTGTAATCAAAATCTAGCTCGTAA 148398 || || || ||||| | |||||| Sbjct 52785 ATAATTATATGAGAAATCACGATCGTAA 52758 Score = 91.5 bits (100), Expect = 1e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 146551 ACAGTGAATTGT-TGTGTGTGCGCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTT 146609 || |||||||| || || || || || ||||| || | ||||||||||| || ||||| Sbjct 54608 ACGGTGAATTGAATGGGT-TGAGCTGCGGGTTTCGTTCTTAAATAATACATTCCTGTTTT 54550 Query 146610 GAGGCCACATCGCCACGAGTGATTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGC 146669 || || |||||| || | ||||| || || | | || ||| ||||| | || Sbjct 54549 AAGTCCTTGTCGCCAGCCGTAAAAATGAATTGATGTTAAAACGGAGTAAGTCGGTTTGGC 54490 Query 146670 CACGAAAAGATTAAACGATTGGCTTTGATCTATGAAAGC 146708 ||| ||||||| || |||||||||||||| |||||||| Sbjct 54489 TACGTAAAGATTTAAAGATTGGCTTTGATCGATGAAAGC 54451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476569037781720