Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq241 125 6e-24
>seq241
Length=949647
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
||||||||| || || |||||||| ||||| || ||||| ||| | ||| |||||
Sbjct 167417 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTC 167476
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | || ||| ||||| ||||| ||||| | || |||||
Sbjct 167477 TGATACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167536
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|||| | | || | || || ||||||||||||||| | ||| | ||||||||
Sbjct 167537 ACAACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 167596
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
||| ||||||||||| || || |||||||||||||||||| |||| |||
Sbjct 167597 CATTCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGGA 167645
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||||||||||||||| || || ||||| || ||||| || ||||| |||||
Sbjct 166277 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATC 166336
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | || ||| || || || || ||||| | || |||||
Sbjct 166337 CGACACCATTGAAAATGTTAAAGCTAAGATCCAAGATAAGGAAGGAATCCCACCAGATCA 166396
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|||| | | || | ||| || ||||||||||||||| ||| | ||||||||
Sbjct 166397 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTACAA 166456
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
||| || |||||||| || || |||||||||||||| || ||||||||
Sbjct 166457 CATCCAGAAAGAATCCACCCTTCATTTAGTATTGAGATTGAGAGGAGGA 166505
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||| || ||||| ||||| |||||||| || || ||||| ||||| || ||
Sbjct 167189 AATGCAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATC 167248
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | || ||| ||||| ||||| ||||| | || |||||
Sbjct 167249 TGATACCATTGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167308
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|||| | | || | || || |||||| | |||||| | ||| | ||||||||
Sbjct 167309 ACAACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAA 167368
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
||| ||||||||||| || || |||||||||||||||||| |||| |||
Sbjct 167369 CATCCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGGA 167417
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||| || ||||| |||||||||||||| || || ||||| ||||| || ||
Sbjct 166049 AATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATC 166108
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | || ||| ||||| || |||||||| | || |||||
Sbjct 166109 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCA 166168
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|||| | | || | ||| || |||||||||||||| ||| | ||||||||
Sbjct 166169 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAA 166228
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
||| ||||||||||| || || ||||| || ||||| || ||||||||
Sbjct 166229 CATCCAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGAGGAGGA 166277
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||||||||||||||| || || ||||| || ||||| || ||||| |||||
Sbjct 166505 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTC 166564
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| || ||| | || ||| ||||| || |||||||| | || || ||
Sbjct 166565 TGATACTATTGAAAACGTTAAAGCTAAAATCCAGGATAAAGAAGGGATCCCACCAGACCA 166624
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|||| | | || | || || |||||| | |||||| ||| | ||||| ||
Sbjct 166625 ACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATAA 166684
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
||| ||||||||||| || || |||||||| ||||| || ||||| ||
Sbjct 166685 CATCCAAAAAGAATCCACCCTCCATTTAGTGTTGAGATTGCGAGGTGG 166732
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||||||||||||||| || || || || || ||||| ||| ||||| |||||
Sbjct 166734 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCT 166793
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| | ||| | || ||| || || || |||||||| | || ||||||
Sbjct 166794 GATACAATTGAAAATGTTAAAGCTAAGATCCAGGATAAAGAAGGAATTCCTCCAGATCAA 166853
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | || | ||| || |||||| | |||||| ||| | || ||||||
Sbjct 166854 CAACGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAAC 166913
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
|| ||||||||||| || || |||||||||||||| || |||| |||
Sbjct 166914 ATCCAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGAGGTGGA 166961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402294898694816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |