Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq241 125 6e-24 >seq241 Length=949647 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||| || || |||||||| ||||| || ||||| ||| | ||| ||||| Sbjct 167417 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTC 167476 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || ||| ||||| ||||| ||||| | || ||||| Sbjct 167477 TGATACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167536 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||| | | || | || || ||||||||||||||| | ||| | |||||||| Sbjct 167537 ACAACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 167596 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||| ||||||||||| || || |||||||||||||||||| |||| ||| Sbjct 167597 CATTCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGGA 167645 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||||||||| || || ||||| || ||||| || ||||| ||||| Sbjct 166277 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATC 166336 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || ||| || || || || ||||| | || ||||| Sbjct 166337 CGACACCATTGAAAATGTTAAAGCTAAGATCCAAGATAAGGAAGGAATCCCACCAGATCA 166396 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||| | | || | ||| || ||||||||||||||| ||| | |||||||| Sbjct 166397 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTACAA 166456 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||| || |||||||| || || |||||||||||||| || |||||||| Sbjct 166457 CATCCAGAAAGAATCCACCCTTCATTTAGTATTGAGATTGAGAGGAGGA 166505 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || ||||| ||||| |||||||| || || ||||| ||||| || || Sbjct 167189 AATGCAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATC 167248 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || ||| ||||| ||||| ||||| | || ||||| Sbjct 167249 TGATACCATTGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167308 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||| | | || | || || |||||| | |||||| | ||| | |||||||| Sbjct 167309 ACAACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAA 167368 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||| ||||||||||| || || |||||||||||||||||| |||| ||| Sbjct 167369 CATCCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGGA 167417 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || ||||| |||||||||||||| || || ||||| ||||| || || Sbjct 166049 AATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATC 166108 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || ||| ||||| || |||||||| | || ||||| Sbjct 166109 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCA 166168 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||| | | || | ||| || |||||||||||||| ||| | |||||||| Sbjct 166169 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAA 166228 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||| ||||||||||| || || ||||| || ||||| || |||||||| Sbjct 166229 CATCCAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGAGGAGGA 166277 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||||||||| || || ||||| || ||||| || ||||| ||||| Sbjct 166505 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTC 166564 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| || ||| | || ||| ||||| || |||||||| | || || || Sbjct 166565 TGATACTATTGAAAACGTTAAAGCTAAAATCCAGGATAAAGAAGGGATCCCACCAGACCA 166624 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||| | | || | || || |||||| | |||||| ||| | ||||| || Sbjct 166625 ACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATAA 166684 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||| ||||||||||| || || |||||||| ||||| || ||||| || Sbjct 166685 CATCCAAAAAGAATCCACCCTCCATTTAGTGTTGAGATTGCGAGGTGG 166732 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || || || || || ||||| ||| ||||| ||||| Sbjct 166734 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCT 166793 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| || || || |||||||| | || |||||| Sbjct 166794 GATACAATTGAAAATGTTAAAGCTAAGATCCAGGATAAAGAAGGAATTCCTCCAGATCAA 166853 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| || |||||| | |||||| ||| | || |||||| Sbjct 166854 CAACGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAAC 166913 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || ||||||||||| || || |||||||||||||| || |||| ||| Sbjct 166914 ATCCAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGAGGTGGA 166961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402294898694816