Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2316 138 2e-26 >seq2316 Length=5934 Score = 138 bits (152), Expect = 2e-26 Identities = 183/249 (73%), Gaps = 10/249 (4%) Strand=Plus/Minus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 || ||||| ||| |||||| ||||| ||||||||||||||| || | | | | Sbjct 2913 TCCTACTCCACCTACATCTACCGTGTGCTGAAGCAGGTGCACCCCGACACTG--GCGTC- 2857 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 |||||||| | |||||||||||||||||||||| || |||||||| |||| || Sbjct 2856 TCCTCCAA---GGCCATGTCGATCATGAACTCGTTCGTGAACGACATCTTCGAGAAGATT 2800 Query 725016 GGCACCGAGGCCGGTCGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCG 725073 | | |||||| ||||| ||| | || || |||| |||||| | ||| | |||| Sbjct 2799 GCCGTCGAGGC--GTCGCGTCTGTGCCACTACAGCAAGAAGAACACGCTGGGCTCTCGCG 2742 Query 725074 AGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCG 725133 | |||||| | || || |||||||| | | ||| || ||| | | |||||||||||| | Sbjct 2741 AAATCCAGTCGGCTGTTCGCCTGATTCTTCCCGGAGAGCTGTCGAAGCACGCCGTCTCGG 2682 Query 725134 AGGGCACCA 725142 ||||||||| Sbjct 2681 AGGGCACCA 2673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177128610342474