Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq569 105 6e-18
seq241 91.5 1e-13
>seq569
Length=200630
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||||||||| || | ||| ||||||||||||||||| ||||
Sbjct 134619 CCACCACGAAGACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAA 134560
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || ||||| || ||||| || || || || || || || || | ||
Sbjct 134559 AGAGTGCGTCCATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGG 134500
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||||||| ||| ||| ||| | | || | | || ||| | ||| |||
Sbjct 134499 ATACCCTCCTTGTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACC 134440
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|| | ||||| |||||||| || | |||||||| || || ||||||
Sbjct 134439 TCGAGGGTGATGGTTTTACCGGTTAGGGTTTTCACGAAAATTTGCATT 134392
>seq241
Length=949647
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||| | || ||||| ||||| || | ||| |||||||| || |||||||| |
Sbjct 167190 TTCCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAG 167131
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| || ||| | || || || || ||||| || || || || || || || || | ||
Sbjct 167130 AAAGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAG 167071
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAG-AGTTGCCACCGTGTCGCTCGATTCC 35686
||| | ||||| ||| ||| ||| |||| | | || | | || || | ||
Sbjct 167070 GAATTCCTTCCTTATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCA 167012
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| || | || || ||||| || ||||||||||| ||||| ||||||||||
Sbjct 167011 ACTTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCATTC 166960
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||| || | || |||||||||||||| | || || ||||| ||||||||||| |
Sbjct 166278 TTCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAG 166219
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| || || |||| || | || ||||| ||||| || || || || || || | ||
Sbjct 166218 AAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAG 166159
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686
||| | || || ||| ||| ||| || || | | || | | || || | ||
Sbjct 166158 GAATTCCTTCTTTATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCA 166100
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| |||| || || ||||| || ||||| ||||| ||||| ||||||||||
Sbjct 166099 ACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCATTC 166048
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||| | ||||||||| || ||||| | || || ||||| ||||||||||| |
Sbjct 167418 TTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAG 167359
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| || || | || || || || ||||| || || ||||| || || || || | |
Sbjct 167358 AAAGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTG 167299
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686
| | | |||||||| ||| ||| || || | | | | | || || | ||
Sbjct 167298 GGATTCCTTCCTTGTCTTGGAT-TTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCA 167240
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| |||| || || ||||| || ||||||||||| ||||| ||||||||||
Sbjct 167239 ACTTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCATTC 167188
Score = 82.4 bits (90), Expect = 7e-11
Identities = 162/237 (68%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 35503 TTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTA 35562
|| |||||||||||||| | | || ||||| | || |||||||| || |||||
Sbjct 167879 TTAATTTCCACCACGTAGGCGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTA 167820
Query 35563 ATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622
||| | | ||| || | || |||| || ||||| || || ||||| ||||| || ||
Sbjct 167819 ATCTGAAAGGGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATC 167760
Query 35623 CGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCG 35681
| || | | |||||||| ||| ||| || || | | || | | || || |
Sbjct 167759 TGGTGGGATTCCTTCCTTGTCTTGGAT-TTTAGCTTTAACATTTTCAATAGTATCAGAAG 167701
Query 35682 ATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|||||| || | ||||| ||||| || || || ||||| || || || |||||||
Sbjct 167700 GTTCCACTTCTAAGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCATTC 167644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450753721671160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |