Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1284 717 0.0
seq1159 378 1e-99
seq104 104 3e-17
>seq1284
Length=72753
Score = 717 bits (794), Expect = 0.0
Identities = 1298/1883 (69%), Gaps = 29/1883 (2%)
Strand=Plus/Minus
Query 68365 TTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCG 68424
||||| | || || ||||||||| | ||||||||| || | || ||| ||||| ||
Sbjct 54614 TTATCGACGGTGAATTGAATGGGTTGAGCTGCGGGTTTCGTTCTTAAATAATACATTCCT 54555
Query 68425 GTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGA 68484
||||| || ||| | | ||| ||||| ||||| || ||||| ||| ||| | ||
Sbjct 54554 GTTTTAAGTCCTTGTCGCCAGCCGTAAAAATGAATTGATGTTAAAACGGAGTAAGTCGGT 54495
Query 68485 TCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCC 68544
| ||||| | || ||| | ||||| ||||||||||||||||| |||| | | || ||
Sbjct 54494 TTGGCTACGTAAAGATTTAAAGATTGGCTTTGATCGATGAAAGCCCCTCGAGCCGCGGCT 54435
Query 68545 ATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCA 68604
||||| || | || | | ||||||||||| || ||| |||| | ||| | |||
Sbjct 54434 TGATTTATGATGCATTTATTTGAAATTTCCCAAACTGTTTTATAAATTTCTTTTAAATCG 54375
Query 68605 TCTGGAA---GGCTCGTATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATC 68661
|| || | || | |||||||| || || | || | || ||| ||| || ||
Sbjct 54374 TCAGGGATTTGGGGGATGTTTTGAATTGAGCCGCGATTTGCAATTATTTGATTTTTCATT 54315
Query 68662 TCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGA 68721
||||| ||| | || || |||||| |||| | | || ||||||| | |||
Sbjct 54314 AAATCATCCCAAAGCCCCCTTTCGGTTAAATCTCTTAATAAGTGGTGATTAACAACTTGG 54255
Query 68722 AATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 68781
|| |||||||| | ||||| || || |||||||| || || ||||| | ||||||
Sbjct 54254 AAATCCCCAGAAAGTACTCTTCGCGTATAAATATTCGATGTGTAAGGTTCAAAAGATTCG 54195
Query 68782 TTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTT 68841
|||||||| ||||||||||| ||||| || |||||||| || || | | |||| ||||
Sbjct 54194 TTATTTCCTAGAATTTGAGCTGTTGAAGCTGTTGGCATTGGGGCTAAGAGTAAAGAATTT 54135
Query 68842 CTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGT 68901
|| | || ||| | | ||||| ||||||| | |||||||||||| | |||||||||
Sbjct 54134 CTTATTCCGTGTTTATTAATTTTTTCTTTTAATTCTTTCCAATCCCATAAATCAGATGGA 54075
Query 68902 ACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTT 68961
||||||||| | ||||||||| | ||||| ||||| || || || | || |||
Sbjct 54074 GTAACATTCCACATATCGTATTGCAAGATTCCTTTACTAACAGGGGAACCTTGGTAAGTT 54015
Query 68962 TCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATT 69021
|||||| || || | ||| |||| ||||||||| || ||||| |||||||||||||
Sbjct 54014 TCATAAACCCCGTCTTTTTCGGCTAATTCACAACTAGCTTCTAAGGCACCGTAATAAAGC 53955
Query 69022 GTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGT-AA 69080
||||| || || | | || | | || ||||| | ||||| || || | | | |
Sbjct 53954 GTTTCAAAGATTTGCACGTTTAATTTATGGGCTTCGGGGCTATC-AAAGGGGAGTCTCAT 53896
Query 69081 AAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATT 69140
| |||||| |||||||| ||||| |||| ||||| || || || | ||| | |||||
Sbjct 53895 CAAAATAAAAGCATCTGCTAATCCTTGAATACCAATTCCAATGGGGCGATGGCGTTTATT 53836
Query 69141 TGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCG 69200
|| ||||||||||||| | || |||||||||| ||| |||| |||||| | ||||
Sbjct 53835 GGACGTTTCAGCTTCTGGGAGTGGGTAATAATTAACATCGATAACTTTATTTAAATTTTT 53776
Query 69201 GACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT---CCATC---TAT 69254
||| ||||| ||| |||| ||| ||||||||| | | | || | |
Sbjct 53775 TGTTACAACTTTTGTGACGATTTTTAATTTTTCAAAATCAAAACTTTTCCTGTCGGGTTT 53716
Query 69255 AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGC 69314
||| ||| || | || | ||||||| |||||||||||| | |||| || | ||
Sbjct 53715 AACGAACTGGTTAACCGCAATTGATGCTAAATTACAAACTGCGATTTCATCAGGAGATGT 53656
Query 69315 ATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATT 69374
|||| || || || || |||| ||| |||| ||| || || || | || ||| || ||
Sbjct 53655 GTATTCAATGATTTCGGTGCATAAATTGCTACTTTTTATTGTACCTAAATGTTGTTGGTT 53596
Query 69375 ACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGA 69434
||| || ||||| ||||| || || | ||| | ||||| ||||||||||| |||||
Sbjct 53595 ACTTTTGCGATTACAAGCGTCTTTATACAACATATATGGAGTTCCAGTTTCAATTTGAGA 53536
Query 69435 TTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTC--T 69492
| || || | |||||| | | || || |||| | | || || || |
Sbjct 53535 CACAATTATGGCTTTCCATAATTCTCTGGCGGGTATT--TGGCGAACAAATTTTTTCCTT 53478
Query 69493 TTTTCATA--TTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAG 69550
||||| || || ||||| || |||||| || |||||| |||| || || |
Sbjct 53477 TTTTCGTAATTTTCGTATAATTCC--ACGAATTTTTCCCCCCAACAATCAGATAAACCGG 53420
Query 69551 GACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATA 69610
|||||| || |||||||| | ||||||| ||| |||| || |||||||||||||
Sbjct 53419 GACATTGATGAGGACACATTAGCGACCACATTGAATCTTCCTCGACGCGTTTCATAAATA 53360
Query 69611 GATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAt 69670
||| |||||||| | ||| ||| | |||||| | ||| ||||||| || ||||
Sbjct 53359 AATCAGGAATCCATAAAGCATAAAATAAATCTCTCGCCCTAACTTCTTCAGCCCCAGTAT 53300
Query 69671 tttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCA 69730
||||||| | || | ||| || | || ||| | |||||| ||||||| ||| || || |
Sbjct 53299 TTTTTTTTAAATTTAAAAAATCAACAACATCCGCATGCCACGGTTCTAAATAAATTGCAA 53240
Query 69731 TGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTC 69790
|||| |||| |||||| || || ||||| | |||| || || |||||| | || |
Sbjct 53239 ACGCTCCAGGTCTTTTATTACCCCCTTGATCGACATATCGAGCTGTATTATTAAAAACCC 53180
Query 69791 TCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTG 69850
| ||| || | | ||| || || ||||||| ||||||| |||| | ||| ||
Sbjct 53179 GTAACATTGGTACTAAACCGTTTGAAATACCATTAGTTCCAGCAATAATCGTGCCTTGTG 53120
Query 69851 CGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAAC 69910
| ||||||||| | | || |||||||| || |||| || || | ||||||
Sbjct 53119 CTCGAATATTATGGACGTTAACTCCAATTCCTCCCGCACTTTTTGATATAATAGCACATT 53060
Query 69911 GTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT-GTTAAGAAGAAAACAG 69969
|| | | | | || || | || ||| || ||| ||| ||| |||||
Sbjct 53059 GTGAGATACATTTAAAAATGCCTTGGATTGAATCCTCCGGCATCATTACTAAG-AAACAT 53001
Query 69970 CTAGACATTT---GATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTG 70026
||||||| | || || | | | | || |||||| || ||| ||||||||
Sbjct 53000 GACGACATTTGTGGGCGAGGTGTCGCTGCGGC---AAATAAAGTCGGACTCGCGTGAGTA 52944
Query 70027 AACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATG 70085
|| | || ||||| | |||||| ||||||||||||||||| || || ||| | ||
Sbjct 52943 AAATACTTCTCAGACATGTAATTGTAAGTTTCAATAGCTGATTCAATGTCTTCACCG-TG 52885
Query 70086 AATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTAT 70145
||| || | || || ||||| |||||||| || || ||||| | |||| || ||
Sbjct 52884 AATCCCAACGGCCACGCGCATTAACATATGTTGGGGACGTTCAGCAATTTTTCCGTTGAT 52825
Query 70146 TTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCT 70205
||| | || ||||| ||| || |||||||| |||||||| || ||||| || || |
Sbjct 52824 TTTTAGGAGATATGAACGTTCGAGTGTTTTAAAACCAAAATAATTATATGAGAAATCACG 52765
Query 70206 TTCGTAAATAATAACAGAATTTA 70228
|||||||| ||| ||||||||
Sbjct 52764 ATCGTAAATGATACAAGAATTTA 52742
Score = 91.5 bits (100), Expect = 2e-13
Identities = 118/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 70339 AATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCA 70398
||| |||| || ||||| || || | ||| | || || ||||| || || || | |||
Sbjct 43457 AATTGTTTCTTCGTTTCTTTATGGAGATTAGTCATAGCAATTCTAGCAGCAAGTGTTGCA 43398
Query 70399 TAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCT 70458
|| |||||||| | |||| | ||||| || |||| |||||||| || || || ||
Sbjct 43397 TAATCAGGATGGTCTGTAATTTTTGTAGCAGCGGTTTCAGCAGCTAAGGTGTCCAACTCA 43338
Query 70459 ATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501
| || ||||| || ||| || ||||||||||| |||||||
Sbjct 43337 ACTGTGGTAACGCCTGGATAAAGACCTTGAATAACCTTCATGG 43295
>seq1159
Length=103958
Score = 378 bits (418), Expect = 1e-99
Identities = 624/893 (70%), Gaps = 13/893 (1%)
Strand=Plus/Plus
Query 39325 TTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 39384
||||||||| || ||||| |||||| || |||||||| || || ||||||
Sbjct 49831 TTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATCAGATATAAG 49890
Query 39385 TTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAAT 39444
| ||| |||||||| |||||||||| ||| ||| ||||| | | || | ||| | |
Sbjct 49891 ATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAGTTCAGTTAA 49950
Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504
|| | ||| |||||||| || ||||| ||| | | |||||||| || || |
Sbjct 49951 TAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCATCCCGATTAA 50010
Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564
|||| || ||||| || |||| ||| || | ||| || || || || || || ||
Sbjct 50011 ACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATCGCGAATAAT 50070
Query 39565 CGATGTTACTACCT-CATCACTCGGTGGATGCAATAA-ATGTTTAAACATTAAGCAGGCG 39622
|||| ||| | | | ||| || ||||| || | |||||| ||| || ||
Sbjct 50071 ACTCGTTA-TACGTTCCTTTGACGGCTTTTG-AATAAGATATGTAAACAATAAACAAGCA 50128
Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682
|| || |||||| || ||||| | ||||||||| |||||||| || | || |||
Sbjct 50129 AATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTTAAACCGGGC 50188
Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742
|||| ||| |||||||| | |||||| || || |||||| ||| |||||||| || ||
Sbjct 50189 ATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAGAAAATACCC 50248
Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG---TATCATTATGTATCCAC 39799
|| || || ||||| ||||| | | || || || | | | | | || |||||
Sbjct 50249 TCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTACTAATCCAA 50308
Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 39859
|| ||||||||||||||||| || |||||||| | ||||| || || ||||| | |
Sbjct 50309 TTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCGTTAAATAAA 50368
Query 39860 TAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAA 39919
| | ||||| | ||| || ||| || || ||||||| || |||||||| ||
Sbjct 50369 AATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTACATTTCAGAG 50428
Query 39920 TGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACC 39979
|| || |||||||| || || ||||| ||||||||||| | |||||| || | || ||
Sbjct 50429 TGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTTACCTGAACT 50488
Query 39980 TCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAAT 40039
||| || ||| | ||| | |||||||| || || ||||||||| ||| ||||||||
Sbjct 50489 TCTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCAGCAAAAAAG 50548
Query 40040 GCCAATACATGTTTAATAAAAT---ATTTTTCATCGGGTGTCAATTTATTCCAGTCATTG 40096
|| || ||||| ||||||| || | |||| || ||| | | ||| | ||||
Sbjct 50549 GCTAAAACATGGGAGATAAAATGACGTTCGTTATCG---GTTAATGTTTGCCAATGATTG 50605
Query 40097 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTAC 40156
| |||||| || | |||||||||||||| |||||||| || || || |||| ||||||
Sbjct 50606 AGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCGCCTGTTTGTAT 50665
Query 40157 ATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATT 40209
| ||| |||||| |||| | || ||||||| || || | |||||||
Sbjct 50666 TTCGCCCAAATATCAGGATACTCAATGGGAAAAACGACGAAACGTCTTGGATT 50718
>seq104
Length=333490
Score = 104 bits (114), Expect = 3e-17
Identities = 266/395 (67%), Gaps = 15/395 (4%)
Strand=Plus/Plus
Query 163156 TATGGAAAAGGAATAAAGGGTGGAATGATGGCTGTCTTTTTGATGGGTTGCTATGATGAC 163215
||||| | || | ||| |||||||||||| | | ||| | |||||||| || ||| |
Sbjct 112952 TATGGTACTGGTAAAAAAGGTGGAATGATGTCGATTTTTCTAATGGGTTGTTACGATC-C 113010
Query 163216 GAGTC-TGGTAAATGGAAGACAGTAACTAAATGTTCC----GGACACGATGATAATACGT 163270
| || || | | | || || || || |||| |||||||||||||| || |
Sbjct 113011 AAATCGTGATTATTTTTGTACTGTTACCAAG-GTTCATACAGGACACGATGATAAAACAT 113069
Query 163271 TA--AGGGTTCTACAAGACCAATTAAAGATGATTAAAATTAGTAAGGATCCaaaaaaaGT 163328
|| | || || ||| | || | | ||||| ||||| ||| ||| || ||| |
Sbjct 113070 TAGAACGG--CTTCAAAATGAACTCGATATGATAAAAATAAGTGGAGATATCAATAAAAT 113127
Query 163329 ACCAGAGTGGTTG-GTAGTTAATAAAATCTAT-ATTCCAGATTTTGTAGCAGAGGATCCA 163386
||| | ||||| || || | ||| | || || || ||||| |||||| | || ||
Sbjct 113128 ACCTAAATGGTTACGTTGT--ACGAAAACAATGATCCCCGATTTAGTAGCAAAAGACCCC 113185
Query 163387 AAACAATCTCCTATCTGGGAAATTTCAGGAGCTGAGTTTACTTCATCCAAATCTCATACA 163446
||| | ||| | ||||||||| | || || || || ||| | | || ||| ||
Sbjct 113186 AAAAACCAACCTGTTTGGGAAATTACGGGCGCGGAATTCACTCAACACGAAGTTCACACC 113245
Query 163447 GCAAATGGAATATCCATTAGATTTCCTAGATTTACTAGGATCAGAAATGATAAAACGTGG 163506
||||||||||| || ||| | || || || |||| | ||| || | || || || |||
Sbjct 113246 GCAAATGGAATTTCAATTCGTTTCCCAAGGGTTACAAAGATTCGAGAAGAAAAGACTTGG 113305
Query 163507 AAAGAATCAACTCATCTAAACGATTTAGTAAACTT 163541
||||| ||||| || |||| || |||| ||| ||
Sbjct 113306 AAAGAGGCAACTAATTTAAATGAATTAGAAAAATT 113340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686848034330280
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