Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_027916.2
Length=160358
Score E
Sequences producing significant alignments: (Bits) Value
seq295 127 2e-24
>seq295
Length=373786
Score = 127 bits (140), Expect = 2e-24
Identities = 211/302 (70%), Gaps = 2/302 (1%)
Strand=Plus/Minus
Query 31252 GCATAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAAC 31311
|||||||| || || || || || || || | |||| ||| || || |||||||||||
Sbjct 5766 GCATAACTGGCGATATTAAAAGGAACTCCAAGACCCATATCCGCTGAACGTTGATATAAT 5707
Query 31312 AAACAGGAAAGTTCATCTCCGGTCACGTAAAATTGAAATAACACATGACAAGGCGGCAAA 31371
||||| |||||||| || ||| || |||||||||| ||| ||||||||| || ||
Sbjct 5706 AAACAAGAAAGTTCTCCTTCGGCTACATAAAATTGAACTAAACAATGACAAGGAGGTAAT 5647
Query 31372 GCCATTTCACAGGTATCGACGGGATTCCAAGCGCTTACTAACAAACGCCGACTGGTTGGA 31431
||||||| | | |||| | ||| |||||||| | | | | | ||| |||||
Sbjct 5646 GCCATTTTAGGGATATCAATGGGGTTCCAAGCACACATAATTATCCTTCGATCAGTTGGT 5587
Query 31432 TCACGCTTAATCTCTTCTATCACGGCTGTTATTTGATCGATTCCTTCACCCGTATAATTA 31491
| | ||||| | || || | ||| |||||| || |||| | ||||||| |
Sbjct 5586 TTATTTTTAATAGTATTAATAACATCCATTAATTGATCAATACCTTTATTAGTATAATCA 5527
Query 31492 CTAT-CACATCCCTTGTAGGCTGCACCGAAATGTCGCCATTGAAACCCATAAATAGGTCC 31550
| | || || | || | || || |||||| ||||||||| ||||||||||||||
Sbjct 5526 GTGTGCATATTAC-CATATTCAGCTCCATAATGTCTCCATTGAAAACCATAAATAGGTCC 5468
Query 31551 CA 31552
||
Sbjct 5467 CA 5466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 512972217180560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |