Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1284 273 2e-68
seq241 120 3e-22
seq412 118 9e-22
>seq1284
Length=72753
Score = 273 bits (302), Expect = 2e-68
Identities = 990/1532 (65%), Gaps = 44/1532 (3%)
Strand=Plus/Minus
Query 130735 ATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTA 130794
|||| ||| || || | ||||| | ||| ||||| |||| || || | || ||
Sbjct 54285 ATCTCTTAATAAGTGGTGATTAACAACTTGGAAATCCCCAGAAAGTACTCTTCGCGTATA 54226
Query 130795 AATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGC 130854
||| || ||| | |||||||| |||||||| || || | ||||| ||||| | ||
Sbjct 54225 AATATTCGATGTGTAAGGTTCAAAAGATTCGTTATTTCCTAGAATTTGAGCTGTTGAAGC 54166
Query 130855 GGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTT 130914
|| ||||| || | | || |||||| | | ||||| | | |||||| ||
Sbjct 54165 TGTTGGCATTGGGGCTAAGAGTAAAGAATTTCTTATTCCGTGTTTATTAATTTTTTCTTT 54106
Query 130915 CAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAG 130974
||||| | ||||||||||| | | || | ||||| ||||||||| |||| |
Sbjct 54105 TAATTCTTTCCAATCCCATAAATCAGATGGAGTAACATT---CCACATATCGTATTGCAA 54049
Query 130975 TATGCCTTTACTGGCGGGACTGGA---TTCGAACGATTCGTAGATTCCTTCGACACGAGC 131031
|| |||||||| | || ||| || | | | ||| || | || || ||
Sbjct 54048 GATTCCTTTACTAACAGG---GGAACCTTGGTAAGTTTCATAAACCCCGTCTTTTTCGGC 53992
Query 131032 CAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAA 131091
| || |||||||| || || |||||||||| ||||| ||||| |||||
Sbjct 53991 TAATTCACAACTAGCTTCTAAGGCACCGTAATAAAGCGTTTCAAAGATTTGCACGTTTAA 53932
Query 131092 TTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACC 131151
|| | |||| | ||| || | || | | |||| ||||||||||| ||||| | ||
Sbjct 53931 TTTATGGGCTTCGGGGCTATCAAAGGGGAGTCTCATCAAAATAAAAGCATCTGCTAATCC 53872
Query 131152 CTGTATCCCAACGCCCACCGGTCTATGTTTTAAATT--ACATTTACGCGAACATTCGGTG 131209
|| || |||| || | || | ||| | ||| || ||| || ||| | |
Sbjct 53871 TTGAATACCAATTCCAATGGGGCGATGGCGTTTATTGGACGTTTCAGC-----TTCTGGG 53817
Query 131210 ---GGATAAAGGTTAATGTCAATTATTTTGTTTAAATTGCGCACTACAATTTGTGTGACG 131266
|| ||| |||| || || | ||| |||||||| ||||| || |||||||
Sbjct 53816 AGTGGGTAATAATTAACATCGATAACTTTATTTAAATTTTTTGTTACAACTTTTGTGACG 53757
Query 131267 CTTTTCAATTTGTCGAAATCAAACGTGCCAGTTTCGAGGTTTACAAATTGATTTACACAT 131326
|||| ||||| || |||||||| | | ||| | || || || || || ||
Sbjct 53756 ATTTTTAATTTTTCAAAATCAAAACTTTTCCTGTCGGGTTTAACGAACTGGTTAACCGCA 53697
Query 131327 ATTGACGCCAGATTACAAACTGCCGTTTCGTCATAATCGCAATACTGAACAATTTCGGCG 131386
||||| || | |||||||||||| |||| ||| | || | || ||||||| |
Sbjct 53696 ATTGATGCTAAATTACAAACTGCGATTTCATCAGGAGATGTGTATTCAATGATTTCGGTG 53637
Query 131387 CACAAATTACTGCTCTTTATGGTGCCCAAATTTTGTTGATTGCTTTTAGCATTCACATG- 131445
|| ||||| || || ||||| || || |||| |||||| || ||||| ||| ||| |
Sbjct 53636 CATAAATTGCTACTTTTTATTGTACCTAAATGTTGTTGGTTACTTTTGCGATT-ACAAGC 53578
Query 131446 GTCCTTGTACATCATGTAGGGCGTGCCCGTTTCGACTTGAGTTTCAATAATGTATCGAAA 131505
||| || |||| ||| || || || || ||||| | ||||| |||| ||| | |
Sbjct 53577 GTCTTTATACAACATATATGGAGTTCCAGTTTCAATTTGAGACACAATTATGGCTTTCCA 53518
Query 131506 GAGTTTTCGAGCAGACAATTG----ATATTTGTATTGGCCGCGTTTTTCGTAATTTTCGT 131561
| || || || | | ||| | | | | || | |||||||||||||||||
Sbjct 53517 TAATTCTCTGGCGGGTATTTGGCGAACAAATTTTTTC----CTTTTTTCGTAATTTTCGT 53462
Query 131562 ACAACGTTTCA--AAGTTTTGGCCA-AACGAACTGTCCAAATTGGGACATTCGCTG-GGA 131617
| || || || || |||| || ||| | | | ||| |||||||| | || |||
Sbjct 53461 ATAA--TTCCACGAATTTTTCCCCCCAACAATCAGAT-AAACCGGGACATT-GATGAGGA 53406
Query 131618 CACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCAT 131677
|||||||||||||||| | | || || || |||||||| ||||| || | ||||
Sbjct 53405 CACATTAGCGACCACATTGAATCTTCCTCGACGCGTTTCATAAATAAATCAGGAATCCAT 53346
Query 131678 AACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTT 131737
|| || || || | |||||| || | ||||| | || || ||||||| ||||||
Sbjct 53345 AAAGCATAAAATAAATCTCTCGCCCTAACTTCTTCAGCCCCAGTATTTTTTTTTAAATTT 53286
Query 131738 AAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCC---TTTG 131794
||||| || | || ||||||||||| ||||| ||||| | ||| | || || | |
Sbjct 53285 AAAAAATCAACAACATCCGCATGCCACGGTTCTAAATAAATTGCAAACGCTCCAGGTCTT 53226
Query 131795 CGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCC 131854
||||| ||||||| |||| ||| | | || || | || || ||||| || |
Sbjct 53225 TTATTACCCCCTTGATCGACATATCGAGCTGTATTATTAAAAACCCGTAACATTGGTACT 53166
Query 131855 AAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGA 131914
|||||||| | | ||||| || | ||| |||| | |||| || || ||
Sbjct 53165 AAACCGTTTGAAATACCATTAGTTCCAGCAATAATCGTGCCTTGTGCTCGAATATTATGG 53106
Query 131915 ACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTA 131974
||||| | |||||| ||||| | ||| || || | || |||| | | | |||
Sbjct 53105 ACGTTAACTCCAATTCCTCCCGCACTTTTTGATATAATAGCACATTGTGAGATACATTTA 53046
Query 131975 TAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGG 132034
| || |||| | ||| | | || ||||| || || || |||| ||| ||
Sbjct 53045 AAAATGCCTTGGATTGAATCCTCCGGCATCATTACTAAGAAACATGACGACATTTGTGGG 52986
Query 132035 TGAAATGTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTAAAAAGTTTTTTGGCCATG 132094
|| ||| | || | ||| || || || || ||||| |||||| || | | ||||
Sbjct 52985 CGAGGTGTCGCTGCGGCAAATAAAGTCGGACTCGCGTGAGTAAAATACTTCTCAGACATG 52926
Query 132095 CACCGATACGATTGTATAGCGGACTCGATATCGCCCAGATGTATGGTCAATGCGACCCGC 132154
| || | || ||||| || || || || | || || | || || |||
Sbjct 52925 TAATTGTAAGTTTCAATAGCTGATTCAATGTCTTCACCGTGAATCCCAACGGCCACGCGC 52866
Query 132155 ATGTACATGTGTTGAATGCGCTCGGCCGTTTTGCCGTCGATTTTGATCAAATA--ACCGT 132212
|| |||| ||||| || || || |||| |||| |||||| | | ||| | ||
Sbjct 52865 ATTAACATATGTTGGGGACGTTCAGCAATTTTTCCGTTGATTTTTAGGAGATATGAACG- 52807
Query 132213 TTTCCAAAGTTTTGAAACCAAAATATTTGTAT 132244
||| | ||||| ||||||||||| || |||
Sbjct 52806 -TTCGAGTGTTTTAAAACCAAAATAATTATAT 52776
>seq241
Length=949647
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | ||||||||| || | ||||| || ||||| |||||||| ||
Sbjct 167188 CCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAA 167129
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| ||||| | ||||| || |||||||||||| | || | ||| |||||||| || ||
Sbjct 167128 AGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGA 167069
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199
| || || ||||| ||| || ||| | |||| | || || | |||| |||||
Sbjct 167068 ATTCCTTCCTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGC-TCAAC 167010
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||||| ||| |||| ||| || |||| |||||| ||||| || |||||
Sbjct 167009 TTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 27030 AACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGC 27089
|||| |||||| ||||| | || || |||||||| || ||||| || | | ||
Sbjct 167407 AACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGA 167348
Query 27090 TCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCT 27149
| ||||| || |||||||||||| | || | ||| |||||||| || || | || ||
Sbjct 167347 CCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCC 167288
Query 27150 TTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGT 27208
|| || ||| || ||| | | || | || || | |||| |||||||| | ||
Sbjct 167287 TTGTCTTGGATTTTAGCTTTAACATTCTCAATGGTATCAGATGGC-TCAACTTCCAATGT 167229
Query 27209 TATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|||| ||| || |||| |||||| |||||||| |||||
Sbjct 167228 AATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 27030 AACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGC 27089
|||| |||||| ||||| | || || ||||||||||| ||||| || | | ||
Sbjct 167635 AACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGA 167576
Query 27090 TCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCT 27149
| ||||| | |||||||||||| | || | ||| |||||||| || || | || ||
Sbjct 167575 CCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGGATTCCTTCC 167516
Query 27150 TTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTT 27209
|| || ||| || ||| | |||| | || || | | ||| |||||||| ||
Sbjct 167515 TTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTTCTAGGGTG 167456
Query 27210 ATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| | ||| || || | ||||| || |||||||||||
Sbjct 167455 ATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | |||||||||||| | || || || ||||| |||||||| ||
Sbjct 166048 CCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAA 165989
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || | ||||| | ||||| || || | || | ||| |||||||| || ||
Sbjct 165988 AGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGG 165929
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199
| || || ||||| ||||| ||| | |||||| ||||| | |||| |||||
Sbjct 165928 ATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGC-TCAAC 165870
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| | || |||| || || |||| |||||| || ||||| |||||
Sbjct 165869 TTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || ||||| | ||| || ||||| | || || |||||||| || || || ||
Sbjct 166732 CCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAA 166673
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || | ||||| || |||||||||||| | || | ||| ||||| || || ||
Sbjct 166672 AGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGG 166613
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || |||||||| ||| || ||| | | |||| | ||| || | | ||| |||
Sbjct 166612 ATCCCTTCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACT 166553
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| | || || | ||| || || | || || ||||| ||||||||
Sbjct 166552 TCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|| ||||| | || || || ||||| |||||||| || | | | || | |||||
Sbjct 167854 ACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGTACGTCCATCTTCC 167795
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
| |||||||| ||| |||| | |||||||||||| || || | || || || || |
Sbjct 167794 AATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGG 167735
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|| || ||| | |||| | ||| || | | ||| ||||||| || || | |||
Sbjct 167734 ATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTTTTT 167675
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || | ||||| || |||||||||||
Sbjct 167674 CCAGTTAATGTTTTTACGAAGATTTGCAT 167646
>seq412
Length=275653
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || ||||| | | || ||||| ||||| || ||||| |||||||| || ||
Sbjct 83015 CCACCACGCAATCTTAGGACTAAATGCAACGTTGATTCTTTCTGAATATTATAATCAGAA 82956
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| ||||| | |||||||| ||||| || ||| |||| | ||||||||||||||| ||
Sbjct 82955 AGAGTGCGCCCATCTTCGAGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGGG 82896
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| |||||||| || |||||| || | |||| | || || | | || ||
Sbjct 82895 ATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATTTTCGATGGTATCGGAAGGCTCGACC 82836
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||||||| | ||||| || | |||||| |||||||| ||||||
Sbjct 82835 TCAAGAGTTATGGTCTTGCCAGTTAAAGTTTTAACAAAGATCTGCATA 82788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424897749009624
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