Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq295 129 5e-25 >seq295 Length=373786 Score = 129 bits (142), Expect = 5e-25 Identities = 386/582 (66%), Gaps = 18/582 (3%) Strand=Plus/Minus Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 || |||||||| || || |||| | ||||| || || ||||| || || || || ||| Sbjct 5790 TGAGCAATCATATAAGTAAGTAAAGCATAACTGGCGATATTAAAAGGAACTCCAAGACCC 5731 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGA 111906 ||||| | || | |||||||| ||| || |||| || | |||||||||||| Sbjct 5730 ATATCCGCTGAACGTTGATATAATAAACAAGAAAGTTCTCCTTCGGCTACATAAAATTGA 5671 Query 111907 -CAAAGTACATGACAAGGAGGCAATGCCATCCCATTCAT---AAAGGGTCCCCATGCACA 111962 | || | |||||||||||| |||||||| | || || ||| ||| ||||| Sbjct 5670 ACTAAACA-ATGACAAGGAGGTAATGCCATTTTAGGGATATCAATGGGGTTCCAAGCACA 5612 Query 111963 CATGATCATCCTTC-TGCTGTAGCGATTATGTTCAATGTCGTGTATGACATTCAAGAGCT 112021 ||| || ||||||| | || | | |||| || ||| | || |||| || | | Sbjct 5611 CATAATTATCCTTCGATCAGTTG-GTTTATTTTTAATAGTATTAATAACATCCATTAATT 5553 Query 112022 GGTCTATCCCTTTACCAGTATAATCCGCCTG-ACAT--CCAGTGTATGTTGCCCCATAGT 112078 | || || |||||| ||||||||| | || | || ||| ||| || ||||| | Sbjct 5552 GATCAATACCTTTATTAGTATAATCAGTGTGCATATTACCA---TATTCAGCTCCATAAT 5496 Query 112079 GTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCCCGGGGCTGTATCTGGAAATTGCT 112138 |||||||||| || ||||||||||| |||| ||| || | ||| | || | Sbjct 5495 GTCTCCATTGAAAACCATAAATAGGTCCCAAATCGCCTTCTTCACGATCAGTTAA-ACCA 5437 Query 112139 CTCTATTC-AACAAATCACTTCTAATATGAGGATTCCAAATCTTCACTCCTTTAGATGAT 112197 | | || || | || || | | | ||||||||||| ||||| ||| || | Sbjct 5436 ATTGAGTCTAAATATTCCCTGGTGCTGTTGGGATTCCAAATATTCACATTTTTCTTTGCT 5377 Query 112198 AACTCTCTTGCATTTGTGGATCCTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTC 112257 || ||| | || || || |||||||| ||||||| | |||||| || || || | Sbjct 5376 AAATCTTTAGCGTTGGTACTCCCTCTAATGAACCATAAAAGTTCTTCAACTACACCGCGC 5317 Query 112258 CAGTACACTCTTTTAGTAGTTAGCAGTGGAAA-AGAATCATGT--AGGGAGAATCTTAGT 112314 || | || | ||| || |||| | ||||| | | ||| |||||| | | | | Sbjct 5316 CAAAAAACGCGTTTTGTTGTTAATAAAGGAAATATGTTGTTGTGAAGGGAGTAACGCATT 5257 Query 112315 TGTGGACCAAACAAAGACAATGTTCCTACTCCAGTTCTATCG 112356 || | ||||| |||| ||||| || ||||| || | |||| Sbjct 5256 TGGGCTCCAAATAAAGCAAATGTACCAACTCCTGTACGATCG 5215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391911794324551