Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq241 165 9e-36
seq569 159 4e-34
seq412 145 9e-30
seq62 111 2e-19
>seq241
Length=949647
Score = 165 bits (182), Expect = 9e-36
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || |||||||| || | || || || ||||||||| | || |||||| ||
Sbjct 166961 AATGCAGATTTTTGTCAAAACTTTGACTGGAAAAACTATTACTTTAGAAGTTGAGCCATC 167020
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| ||||| |||| | || |||||||| ||||| ||||| |||||||||||||| ||
Sbjct 167021 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCA 167080
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||| |||| || || ||||| ||||| || |||| || || || | || || ||
Sbjct 167081 ACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGGCGCACTCTTTCTGATTACAA 167140
Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608
| ||||||||||||| ||||| ||
Sbjct 167141 TATCCAAAAGGAATCTACTCTCCA 167164
Score = 165 bits (182), Expect = 9e-36
Identities = 185/247 (75%), Gaps = 3/247 (1%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || || || | || || || || || || | || || || |
Sbjct 167645 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTC 167704
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| |||| |||| | || |||||||| || |||||||| ||||| || ||||| ||
Sbjct 167705 TGATACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167764
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| | ||||| |||||||| ||| | || |||| |||||||| |||| || ||
Sbjct 167765 ACAGCGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAA 167824
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAG 27644
| ||||||||||||||||||| ||| |||| | || || || |||||| | ||||
Sbjct 167825 TATCCAAAAGGAATCCACTCTGCATTTAGTTCTTCGCCTACGTGGTGGAAA---TTAACT 167881
Query 27645 TTTTTCC 27651
|||||||
Sbjct 167882 TTTTTCC 167888
Score = 154 bits (170), Expect = 2e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| ||||| | ||||| || || || || | || ||||| | |
Sbjct 166734 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCT 166793
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| |||| | || ||||| || ||||| || || |||||||||||||| ||
Sbjct 166794 GATACAATTGAAAATGTTAAAGCTAAGATCCAGGATAAAGAAGGAATTCCTCCAGATCAA 166853
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| |||| ||||||||||| ||||| || |||| ||||| || | ||||| ||
Sbjct 166854 CAACGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAAC 166913
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||| ||||| ||||| ||| |||| |||
Sbjct 166914 ATCCAAAAAGAATCAACTCTCCATTTAGTATTG 166946
Score = 152 bits (168), Expect = 6e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||||||||| || | || || || ||||||||| | || |||||| ||
Sbjct 166049 AATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATC 166108
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| ||||| |||| | || |||||||| ||||| || || |||||||||||||| ||
Sbjct 166109 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCA 166168
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| || |||| ||||||||||| ||| | || || | || || || | || || ||
Sbjct 166169 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAA 166228
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||| ||||| || || ||| | || |||
Sbjct 166229 CATCCAAAAAGAATCAACCCTCCATTTGGTGTTG 166262
Score = 152 bits (168), Expect = 6e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||||||||| || | || || || |||||||| | || |||||| ||
Sbjct 167189 AATGCAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATC 167248
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| ||||| ||| | || |||||||| || |||||||| ||||| || ||||| ||
Sbjct 167249 TGATACCATTGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167308
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||| | || || || ||||| ||||| || |||| |||||| || | || || ||
Sbjct 167309 ACAACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAA 167368
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||| ||||| || || ||| |||| |||
Sbjct 167369 CATCCAAAAAGAATCAACCCTCCATTTAGTATTG 167402
Score = 147 bits (162), Expect = 2e-30
Identities = 161/214 (75%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| ||||| || | || || ||||||||||| | || |||||| ||
Sbjct 165821 AATGCAGATCTTCGTCAAAACTTTGACTGGAAAGACTATTACATTGGAAGTTGAGCCATC 165880
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | |||| | || ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct 165881 CGACACCATAGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATCCCACCAGATCA 165940
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||| | || |||||||| || ||| | || |||| ||||| || | || || ||
Sbjct 165941 ACAACGTTTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACTCTTTCTGATTACAA 166000
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||||||||||| ||||||||| | || |||
Sbjct 166001 TATCCAAAAGGAATCAACTCTTCATTTGGTATTG 166034
Score = 129 bits (142), Expect = 7e-25
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || || || | || || || || || || || || || || |
Sbjct 167417 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTC 167476
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| ||||| |||| | || |||||||| || |||||||| ||||| || ||||| ||
Sbjct 167477 TGATACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167536
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||| |||| || || ||||| ||| | || |||| |||||| || | || || ||
Sbjct 167537 ACAACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 167596
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||| ||||| || || ||| |||| |||
Sbjct 167597 CATTCAAAAAGAATCAACCCTCCATTTAGTATTG 167630
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || || | || || || || || || | ||||| ||| || |
Sbjct 165594 ATGCAGATTTTCGTGAAAACCTTGACTGGTAAAACCATCACGTTAGAGGTCGAGCCATCT 165653
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| |||| ||||||| ||||| |||||||| ||||| || || ||||||||
Sbjct 165654 GACACTATTGAAAATGTGAAGGCGAAAATCCAGGACAAAGAGGGGATCCCACCAGACCAA 165713
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || | || ||||| || || ||| | || |||| |||||||| | || || |||
Sbjct 165714 CAACGGTTGATCTTTGCCGGAAAACAATTAGAAGATGGACGTACCCTTTCCGATTACAAT 165773
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
||||||||||||| ||||| ||
Sbjct 165774 ATCCAAAAGGAATCAACTCTCCA 165796
Score = 120 bits (132), Expect = 3e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| ||||| | || || || || || || | || || || ||
Sbjct 166277 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATC 166336
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||||| |||| | || ||||| || || || ||||| ||||| || ||||| ||
Sbjct 166337 CGACACCATTGAAAATGTTAAAGCTAAGATCCAAGATAAGGAAGGAATCCCACCAGATCA 166396
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| || |||| ||||||||||| ||| | || |||| || || || | || || ||
Sbjct 166397 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTACAA 166456
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || |||||||| |||||| |||| |||
Sbjct 166457 CATCCAGAAAGAATCCACCCTTCATTTAGTATTG 166490
>seq569
Length=200630
Score = 159 bits (176), Expect = 4e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || || || || || ||||| || || || || || |||||||| |
Sbjct 134392 AATGCAAATTTTCGTGAAAACCCTAACCGGTAAAACCATCACCCTCGAGGTTGAACCCTC 134451
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| ||| | |||| | ||||| ||||| || ||||||||||| || || ||||| ||
Sbjct 134452 CGATACCATCGAAAATGTCAAGGCAAAAATCCAAGACAAGGAGGGTATCCCACCAGATCA 134511
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||| |||| || |||||||| ||||| || |||| || || || | ||||| ||
Sbjct 134512 ACAACGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGACGCACTCTTTCCGACTACAA 134571
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||||||||| || ||||| | || ||||||||||| |||||
Sbjct 134572 CATTCAAAAGGAATCGACGCTTCACTTGGTGTTGCGTCTTCGTGGTGG 134619
>seq412
Length=275653
Score = 145 bits (160), Expect = 9e-30
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || | || |||||||| || ||||||||||| ||| |
Sbjct 82789 ATGCAGATCTTTGTTAAAACTTTAACTGGCAAGACCATAACTCTTGAGGTCGAGCCTTCC 82848
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | |||| | |||||||| || || ||||| |||||||| || || || ||
Sbjct 82849 GATACCATCGAAAATGTCAAGGCTAAGATCCAAGACAAAGAGGGAATCCCACCGGATCAA 82908
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| ||||||| || || || |||||||| |||| || || || | || ||||||
Sbjct 82909 CAGCGTTTAATTTTCGCGGGAAAACAACTCGAAGATGGGCGCACTCTTTCTGATTATAAT 82968
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTC 27615
| || || ||||| || | ||| |||||
Sbjct 82969 ATTCAGAAAGAATCAACGTTGCATTTAGTC 82998
>seq62
Length=648032
Score = 111 bits (122), Expect = 2e-19
Identities = 173/247 (70%), Gaps = 3/247 (1%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || || | | || || || || || || | || || || |
Sbjct 445528 AATGCAAATCTTCGTAAAAAGTTTAACTGGAAAAACCATCACCTTGGAAGTGGAACCTAC 445587
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| |||| |||| | || | ||| ||||| |||||||| | ||||| || || ||
Sbjct 445588 TGATACTATTGGAAATGTAAAAGTTAAGATTCAAGACAAGGAAAGGATTCCACCGGATCA 445647
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| ||||||| | |||| || | || |||| |||||||| |||| || ||
Sbjct 445648 ACAGCGTTTAATTTTCCATCGTAAAGAATTGGAAGATGGACGTACCCTTTCAGATTACAA 445707
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAG 27644
| || | ||| |||| ||||| || |||| | || || || |||||| || |||
Sbjct 445708 TATCTATAAGAAATCTACTCTGTATTTAGTTATTCGCCTACGTGGTGGAAAA---TAACT 445764
Query 27645 TTTTTCC 27651
|||||||
Sbjct 445765 TTTTTCC 445771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570259948916240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |