Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq241 143 2e-29
seq569 140 2e-28
seq412 111 1e-19
seq62 91.5 9e-14
>seq241
Length=949647
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| || ||||||||||| || ||||| ||||| || || |||
Sbjct 166960 CCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAA 166901
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || ||| | ||||||||||||||||| ||||| |||||||| ||||| || || ||
Sbjct 166900 AGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGA 166841
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||| || || || |||| || | |||||| | |||||| || || ||
Sbjct 166840 ATTCCTTCTTTATCCTGGATC-TTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAAC 166782
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||| || |||||||||||||| || || |||||||| |||||
Sbjct 166781 TTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734
Score = 140 bits (154), Expect = 2e-28
Identities = 161/214 (75%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|||||| |||||||| ||| || ||||| ||||||||||| ||||| || || | ||
Sbjct 166718 CAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAAAGAGTACGTCCATC 166659
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
|||||||||||||||||| || |||||||| |||||||| || || | || || || ||
Sbjct 166658 TTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGGATCCCTTCTTTATC 166599
Query 34614 TGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672
||| ||| | ||||||| | ||| || || || ||||||| || || |
Sbjct 166598 CTGGAT-TTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACTTCCAATGTGATGG 166540
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||||| ||||| || || |||||||| |||||
Sbjct 166539 TTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506
Score = 138 bits (152), Expect = 7e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| |||||||| |||||||| || || ||||| |||
Sbjct 167188 CCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAA 167129
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || ||| | |||||||||||||||||||| || |||||||| ||||| || || ||
Sbjct 167128 AGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGA 167069
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||| || ||| ||| | |||||| | ||| || || ||| ||
Sbjct 167068 ATTCCTTCCTTATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAAC 167010
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || ||||| || || || ||||| ||||||||||||||
Sbjct 167009 TTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962
Score = 134 bits (148), Expect = 9e-27
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| || |||||||| || || ||||| ||||| ||||| |||
Sbjct 167416 CCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAA 167357
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | |||||||||||||||||||| || || ||||| ||||| || || ||
Sbjct 167356 AGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGG 167297
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||||||| ||| ||| | |||||| | ||| || || ||| ||
Sbjct 167296 ATTCCTTCCTTGTCTTGGAT-TTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCAAC 167238
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || ||||| || || || ||||| ||||| ||||||||
Sbjct 167237 TTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190
Score = 129 bits (142), Expect = 4e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| || |||||||| || || ||||||||||| ||||| |||
Sbjct 167644 CCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAA 167585
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| | |||||||||||| || |||||||| ||||| || || ||
Sbjct 167584 AGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGG 167525
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||||||| ||| ||| | |||||| | ||| || || |||||
Sbjct 167524 ATTCCTTCCTTGTCTTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCAC 167466
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || ||||| || ||||| ||||| || || || |||||
Sbjct 167465 TTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418
Score = 125 bits (138), Expect = 4e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||||||||||||||| || || ||||| ||||| ||||| |||
Sbjct 166276 CCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAA 166217
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||| | ||||||||| ||||| ||||| || ||||| || || ||
Sbjct 166216 AGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGA 166157
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||| || || || ||| ||| | |||||| | ||| || || ||| ||
Sbjct 166156 ATTCCTTCTTTATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAAC 166098
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || ||||| || || || ||||| ||||| ||||||||
Sbjct 166097 TTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050
Score = 123 bits (136), Expect = 2e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|| ||||| |||||| |||||||| || || ||||||||||| || || | |||||
Sbjct 167854 ACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGTACGTCCATCTTCC 167795
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||||||||| || || || ||||||||||| || || || | ||| ||||||||| |
Sbjct 167794 AATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGG 167735
Query 34618 ATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
|| ||| | |||||| | ||| || || |||||||| | ||| || |||||
Sbjct 167734 AT-TTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTTTT 167676
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| ||||| || || || |||||
Sbjct 167675 TCCAGTTAATGTTTTTACGAAGATTTGCAT 167646
Score = 113 bits (124), Expect = 3e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
||| ||||| |||||||| |||||||| || || ||||| ||||| || || | ||
Sbjct 165806 CAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAAAGGGTACGTCCATC 165747
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
||| | |||||| |||||||| || || || |||||||| || || | ||||| |||||
Sbjct 165746 TTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGGATCCCCTCTTTGTC 165687
Query 34614 TGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672
||| ||| | || || | ||| ||||| ||| || || | || || |
Sbjct 165686 CTGGAT-TTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGACCTCTAACGTGATGG 165628
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||||| || || |||||||| |||||||||||
Sbjct 165627 TTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594
>seq569
Length=200630
Score = 140 bits (154), Expect = 2e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || | ||||||||||||||| || || || |||||||||||||| || || ||
Sbjct 134620 GCCACCACGAAGACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGA 134561
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || | ||||| ||||||||||| || || |||||||| ||||| || || ||
Sbjct 134560 AAGAGTGCGTCCATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGG 134501
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCA 34657
| |||||||||||| ||| ||||| || || | || || || | || |
Sbjct 134500 GATACCCTCCTTGTCTTGGAT-TTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAA 134442
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | ||| || ||||||||||||| |||||||| ||||| |||||
Sbjct 134441 CCTCGAGGGTGATGGTTTTACCGGTTAGGGTTTTCACGAAAATTTGCAT 134393
>seq412
Length=275653
Score = 111 bits (122), Expect = 1e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|| || ||||| |||||||| ||||| || ||| | ||||| |||||||| || || ||
Sbjct 82979 TCTTTCTGAATATTATAATCAGAAAGAGTGCGCCCATCTTCGAGTTGTTTTCCCGCGAAA 82920
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|||||||||||||| ||||| || | |||||| |||||| |||||| || | |
Sbjct 82919 ATTAAACGCTGTTGATCCGGTGGGATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATTT 82860
Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695
|| || || ||| || || | ||||| || || || ||||| ||||| |||
Sbjct 82859 TCGATGGTATCGGAAGGCTCGACCTCAAGAGTTATGGTCTTGCCAGTTAAAGTTTTAACA 82800
Query 34696 AAAATCTGCATGTT 34709
|| |||||||| ||
Sbjct 82799 AAGATCTGCATATT 82786
>seq62
Length=648032
Score = 91.5 bits (100), Expect = 9e-14
Identities = 102/135 (76%), Gaps = 1/135 (1%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||| ||||| || || ||||||||||| ||||| ||||| || || | ||||||
Sbjct 445521 ACCAACTGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCA 445462
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
||||||||||| | || |||||||| |||| || || || | ||| ||| | ||| |
Sbjct 445461 AGTTGTTTACCAGAGAAGATTAAACGTTGTTCATCTGGTGGGATTCCTTCCGTATCTTGG 445402
Query 34618 ATCTTTTGTTTTAAC 34632
|| ||| | ||||||
Sbjct 445401 AT-TTTAGCTTTAAC 445388
Score = 89.7 bits (98), Expect = 3e-13
Identities = 93/120 (78%), Gaps = 4/120 (3%)
Strand=Plus/Minus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|| ||||||||||| ||||| ||||| || || | ||||||||||||||||| || ||
Sbjct 445305 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGTTTACCAGCGAAG 445246
Query 34576 ATTAAAC---GCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC 34632
||||||| ||||| || || || | ||| ||||||| | ||| ||| ||||||||
Sbjct 445245 ATTAAACTTGTTTGTTGATCTGGTGGGATTCCTTCCTTGTATTGGAT-TTTAGTTTTAAC 445187
Score = 84.2 bits (92), Expect = 1e-11
Identities = 130/183 (71%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 34525 ATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGC 34584
|| || ||||||||||| || || | ||||| | || ||||| || |||||||||
Sbjct 445710 ATATTGTAATCTGAAAGGGTACGTCCATCTTCCAATTCTTTACGATGGAAAATTAAACGC 445651
Query 34585 TGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTG 34644
||||| ||||| || | | ||||||||| ||||| ||||| | ||| ||
Sbjct 445650 TGTTGATCCGGTGGAATCCTTTCCTTGTCTTGAATCTTAACTTTTACATTTCCAATAGTA 445591
Query 34645 TC-TTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTG 34703
|| | | | |||||||||| ||| || ||||| || ||||| |||| || || || ||
Sbjct 445590 TCAGTAGGT-TCCACTTCCAAGGTGATGGTTTTTCCAGTTAAACTTTTTACGAAGATTTG 445532
Query 34704 CAT 34706
|||
Sbjct 445531 CAT 445529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314702454276941
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